Cavia porcellus (domestic guinea pig): 100714615
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Entry
100714615 CDS
T07777
Symbol
Smarcb1
Name
(RefSeq) SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1 isoform X1
KO
K11648
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1
Organism
cpoc
Cavia porcellus (domestic guinea pig)
Pathway
cpoc03082
ATP-dependent chromatin remodeling
cpoc03250
Viral life cycle - HIV-1
cpoc04714
Thermogenesis
cpoc05225
Hepatocellular carcinoma
Brite
KEGG Orthology (KO) [BR:
cpoc00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
100714615 (Smarcb1)
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
100714615 (Smarcb1)
09150 Organismal Systems
09159 Environmental adaptation
04714 Thermogenesis
100714615 (Smarcb1)
09160 Human Diseases
09162 Cancer: specific types
05225 Hepatocellular carcinoma
100714615 (Smarcb1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
cpoc01009
]
100714615 (Smarcb1)
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cpoc03021
]
100714615 (Smarcb1)
03036 Chromosome and associated proteins [BR:
cpoc03036
]
100714615 (Smarcb1)
Protein phosphatases and associated proteins [BR:
cpoc01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
100714615 (Smarcb1)
Transcription machinery [BR:
cpoc03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
100714615 (Smarcb1)
SWI/SNF complex
100714615 (Smarcb1)
Chromosome and associated proteins [BR:
cpoc03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
100714615 (Smarcb1)
PBAF complex
100714615 (Smarcb1)
SWI/SNF complex
100714615 (Smarcb1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF5
INI1_DNA-bd
DUF1679
Motif
Other DBs
NCBI-GeneID:
100714615
NCBI-ProteinID:
XP_003477997
Ensembl:
ENSCPOG00000036261
LinkDB
All DBs
Position
Unknown
AA seq
385 aa
AA seq
DB search
MMMMALSKTFGQKPVKFQLEDDGEFYMIGSEVGNYLRMFRGSLYKRYPSLWRRLATVEER
KKIVASSHGKKTKPNTKDHGYTTLATSVTLLKASEVEEILDGNDEKYKAVSISTEPPTYL
REQKAKRNSQWVPTLPNSSHHLDAVPCSTTINRNRMGRDKKRTFPLCFDDHDPAVIHENA
SQPEVLVPIRLDMEIDGQKLRDAFTWNMNEKLMTPEMFSEILCDDLDLNPLTFVPAIASA
IRQQIESYPTDSILEDQSDQRVIIKLNIHVGNISLVDQFEWDMSEKENSPEKFALKLCSE
LGLGGEFVTTIAYSIRGQLSWHQKTYAFSENPLPTVEIAIRNTGDADQWCPLLETLTDAE
MEKKIRDQDRNTRRMRRLANTAPAW
NT seq
1158 nt
NT seq
+upstream
nt +downstream
nt
atgatgatgatggcattaagcaagaccttcgggcagaagcccgtcaagttccagctggag
gacgacggtgaattctacatgatcggctccgaggtgggaaactacctccgtatgttccga
ggttctctgtacaagagatacccctcactgtggaggcgactagctactgtggaagagagg
aagaaaatagttgcatcgtcacatggtaaaaaaacaaaacctaacactaaggatcatgga
tataccacccttgccaccagtgtcactttgttaaaagcttccgaggtggaagagattctt
gacggcaatgatgagaagtacaaggctgtgtccatcagcacggagccccccacctacctc
agggaacagaaggccaagaggaacagccagtgggtccccaccctgcccaacagttcccat
catctagatgctgtgccatgttctaccactatcaataggaaccgcatgggccgggacaag
aagagaaccttccccctgtgctttgatgaccatgacccagctgtgattcacgagaatgcc
tctcagccggaggtgctggtgcccatcaggctggacatggagattgatgggcagaagctg
cgggatgcctttacctggaacatgaatgagaagctgatgactcctgagatgttttcagag
atcctctgcgatgacttggatttgaacccactgacatttgtaccagccatcgcctctgcc
atcagacagcaaattgaatcctaccccacagacagcatcctggaggaccagtctgaccag
cgtgttatcatcaagctgaacatccacgtgggaaacatctccctggtggaccagtttgag
tgggacatgtcggagaaggagaactcaccagagaagtttgccctgaaactgtgctccgag
ctgggcctgggtggggagtttgtcaccaccatcgcatacagcatccgggggcaactgagc
tggcatcagaagacctacgccttcagtgagaaccctctgcccacggtggagattgctatc
cggaacacaggcgatgctgaccagtggtgcccactgctggagacactgactgatgctgag
atggagaagaagatccgagaccaggacagaaacacaaggcggatgaggcgtctcgccaac
actgctccagcctggtga
DBGET
integrated database retrieval system
