Cavia porcellus (domestic guinea pig): 100714770
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Entry
100714770 CDS
T07777
Symbol
Pnn
Name
(RefSeq) pinin
KO
K13114
pinin
Organism
cpoc
Cavia porcellus (domestic guinea pig)
Pathway
cpoc03013
Nucleocytoplasmic transport
cpoc03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
cpoc00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
100714770 (Pnn)
03015 mRNA surveillance pathway
100714770 (Pnn)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cpoc03019
]
100714770 (Pnn)
03041 Spliceosome [BR:
cpoc03041
]
100714770 (Pnn)
Messenger RNA biogenesis [BR:
cpoc03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
100714770 (Pnn)
Spliceosome [BR:
cpoc03041
]
Complex C
Other components
EJC/TREX
100714770 (Pnn)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Pinin_SDK_N
Pinin_SDK_memA
Motif
Other DBs
NCBI-GeneID:
100714770
NCBI-ProteinID:
XP_003471961
Ensembl:
ENSCPOG00000030068
UniProt:
A0A286X870
LinkDB
All DBs
Position
Unknown
AA seq
741 aa
AA seq
DB search
MAVAVRTLQEQLEKAKESLKNVDENIRKLTGRDPNDVRPIQARLLALSGPGGGRGRGSLL
LRRGFSDSGGGPPAKQRDLEGAVSRLGGERRTRRESRQESDPEDDDVKKPALQSSVVATS
KERTRRDLIQDQNMDEKGKQRNRRIFGLLMGTLQKFKQESTVATERQKRRQEIEQKLEVQ
AEEERKQVENERRELFEERRAKQTELRLLEQKVELAQLQEEWNEHNAKIIKYIRTKTKPH
LFYIPGRMCPATQKLIEESQRKMNALFEGRRIEFAEQINKMEARPRRQSMKEKEHQVVRN
EEPKAEQEEGKVAQREEELEETGNQHNDVEIEEAGEEEEKEVGIVHSDAEKEQEEEEQKQ
EMEVKMEEETEVRESEKQQDSQAEEVIDVLEMVENVKSVVAEQEVMETNQVESMEPSENE
TSKELEPEMEFEVEPDKECKSLSPGKENISAVEMEKESEEKEGKESEPQLEPVVQPQPLP
QPQSQLQPQPPTQPTTQSQPQPQPQSQPQPQPQSQPVLQPQPVSQPETLPLAVLQPSPQV
IQDQGNLLPERKEFAVESVKPTEVPVEPVLTILAESKSKTKTRSRSRGRARNKTSKSRSR
SSSSSSSSSSSTSSSSGSSSSSGSSSSRSSSSSSSSTSGSSSRDSSSSTTSSSESRSRSR
GRGHNRDRKHRRSVDRKRRDTSGLERSHKSSKGGSSRDAKGSKDKSSRSDRKRSISESSR
TGKRSSRSERDRKSDRKDKRR
NT seq
2226 nt
NT seq
+upstream
nt +downstream
nt
atggcggtcgcggttagaactttgcaggagcagctagaaaaggccaaagagagcctaaaa
aacgtggatgagaatattcgcaagctcaccgggcgagatccaaatgacgtgagacccatc
caagccaggttgctggccctttctggtcctggtggaggtagaggacgtggtagtttactg
ctgaggcgtggattctcagatagtggaggaggacccccagccaaacagagagaccttgaa
ggggcagtcagtaggctgggtggagagcgtcggacaagaagagaatcacgccaagaaagc
gacccagaggatgatgatgttaaaaagccagcattgcagtcttcggttgtagctacctcc
aaagagcgtacacgcagagaccttatccaggatcaaaatatggatgaaaaggggaagcaa
aggaaccggcgaatatttggcttgttgatgggtactcttcagaaatttaaacaagaatcc
actgttgctactgaaaggcaaaagaggcgccaagaaattgaacaaaaacttgaagttcaa
gcagaagaagagagaaagcaggttgaaaatgagaggagagagctatttgaagagaggcgt
gctaaacagacagagctgcggcttttggagcagaaagttgagcttgcgcaactgcaagaa
gaatggaatgagcataatgccaagataattaaatatataagaactaagacaaagccccat
ttgttttatattcctggaagaatgtgtccagctacccaaaaattaatagaagaatcacag
agaaaaatgaatgctttatttgaaggtagacgcatcgaatttgcagaacaaataaataaa
atggaggctaggcctagaagacaatcaatgaaggaaaaagagcatcaggtggtgcgtaat
gaagaacccaaggcggaacaagaagagggtaaggtggctcagcgagaggaagagttggag
gagacaggtaatcagcacaatgatgtagaaatagaggaagcaggagaggaagaggaaaaa
gaagtaggtatagttcatagtgatgcagaaaaagaacaggaagaggaggaacagaaacag
gaaatggaggttaagatggaggaggaaactgaggtaagagagagtgagaagcagcaggat
agtcaggctgaagaggttatagatgtgctagagatggttgagaatgtcaaaagtgtagtt
gctgagcaggaggtaatggaaactaaccaagttgaaagtatggagccttcagaaaatgaa
actagcaaagaattggagccagagatggaatttgaagttgagccagataaagaatgtaaa
tctctttctcctggaaaagaaaatattagtgctgtagaaatggaaaaggaatctgaggaa
aaagaaggaaaagaatctgagcctcaacttgagcctgtggttcagcctcagcccctgcct
cagccccagtcccagcttcagccccagcctccaacccagcccacaacccagtcccagccc
cagccccagccccagtcccagccccagccccagccgcagtcccagccagtactccagccc
cagcctgtttctcagcctgaaactttgccattagctgtcttacagccatcacctcaggtt
attcaggatcaaggaaacttattacctgagcggaaggaatttgctgtagaatctgtgaag
cccactgaggtgccagtagagccagtcttgacgatacttgcagaaagtaaaagcaaaacc
aaaactaggagcaggagtagaggtcgtgccagaaataaaacaagcaagagcagaagtcga
agcagtagcagtagtagttcgagtagcagctcaactagtagcagcagtggaagcagttcc
agcagtggcagcagtagtagtcgtagcagctccagcagcagctccagcacaagcggtagc
agcagcagagacagtagcagcagtactactagtagtagtgaaagtaggagtcgaagtaga
ggccggggacataacagagatagaaagcacagaaggagcgtggatcggaagcggagggat
acttcaggactagaaagaagtcacaaatcttcaaaaggtggtagtagtagagatgcaaaa
ggatcaaaggataagagttcccggtccgacagaaagaggtctatatcagagagtagtcga
acaggcaaaagatcttcaagaagtgaaagagaccgaaaatcagacaggaaagacaaaagg
cgttaa
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