Cavia porcellus (domestic guinea pig): 100715019
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Entry
100715019 CDS
T07777
Symbol
Ptchd1
Name
(RefSeq) patched domain-containing protein 1
KO
K24682
patched domain-containing protein
Organism
cpoc
Cavia porcellus (domestic guinea pig)
Brite
KEGG Orthology (KO) [BR:
cpoc00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
cpoc04990
]
100715019 (Ptchd1)
Domain-containing proteins not elsewhere classified [BR:
cpoc04990
]
Other domain-containing proteins
Patched domain-containing proteins
100715019 (Ptchd1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Patched
Sterol-sensing
NPC1_MLD
Motif
Other DBs
NCBI-GeneID:
100715019
NCBI-ProteinID:
XP_003466451
Ensembl:
ENSCPOG00000035225
UniProt:
A0A286Y0P2
LinkDB
All DBs
Position
Unknown
AA seq
888 aa
AA seq
DB search
MLRQVLHRGVRTCFSRLGHFIASHPVFFASAPVLISILLGASFSRYQVEESVEHLLAPQH
SLAKIERNLVNSLFPVNRSKHRLYSDLQTPGRYGRVIVTSFQKANMLDQHHTDLILKLHA
AVTKIQVPRPGFNYTFAHICILNNDKTCIVDDIVHVLEELKNARATNRTNFAITYPITHL
KDGRAVYNGHQLGGVTVHSKDRVKSAEAIQLTYYLQSINSLNDMVAERWESSFCDTVRLF
QKSNNKIKMYPYTSSSLREDFQKTSRVSERYLVTSLILVVTMAILCCSMQDCVRSKPWLG
LLGLVTISLATLTAAGIINLTGGKYNSTFLGVPFVMLGHGLYGTFEMLSSWRKTREDQHV
KERTAAVYADSMLSFSLTTAMYLVTFGIGASPFTNIEAARIFCCNSCIAIFFNYLYVLSF
YGSSLVFTGYIENNYQHSIFCRKVPKPEVLQEKPAWYRFLLTARFSEDTTEGEEANTYES
HLLVCFLKRYYCDWITNTYVKPFVVLFYLIYISFALMGYLQVSEGSDLSNIVATATQTIE
YTTAQQKYFSNYSPVIGFYIYESIEYWNTSVQEDVLEYTKGFVRISWFESYLNYLRKLNI
TTGLPKKNFTDMLRNSFLKAPQFSHFQEDIIFSKKYNDEVDVVASRMFLVAKTMETNREE
LYDLLETLRRLSVTSKVKFIVFNPSFVYMDRYASSLGAPLHNSCISALFLLFFSAFLVAD
SLINVWITLTVVSVEFGVIGFMTLWKVELDCISVLCLIYGINYTIDNCAPLLSTFVLGKD
FTRTKWVKNALEVHGVAILQSYLCYIVGLIPLAAVPSNLTCTLFRCLFLIAFVTFFHCFA
ILPVILTFLPPSKKKRKEKKNPENREEIECVEMVDIDSTRVVDQITTV
NT seq
2667 nt
NT seq
+upstream
nt +downstream
nt
atgctgcggcaggttctgcacaggggcgtgaggacgtgtttctcccggctcggccacttc
attgccagtcacccggtcttcttcgcctcggcgccggtgctcatctccatcctgctcggc
gccagcttcagccgctaccaggtcgaagagagcgtggagcacctgctggcgccccagcac
agcctggccaagatcgagcgcaacctcgtcaacagcctcttcccggtcaaccgctccaaa
caccggctctactcggacctgcagacccccgggcgctacggcagggtcatcgtcacctcc
tttcagaaagccaacatgctggaccagcatcacaccgacttgatcttaaagttgcatgct
gctgtcaccaagatccaggttccaaggcctggttttaattacacgtttgcccacatatgt
atcctgaataatgataagacttgcatcgtggatgacatagtacacgttctggaagagcta
aagaatgctcgggccaccaatcggaccaattttgctatcacttacccgatcactcactta
aaggacgggagggccgtgtataatgggcaccagcttggaggcgtcactgtgcacagcaag
gatcgggtgaaatcagcagaagccattcagcttacctactacctacagtcaatcaacagt
ctcaatgacatggtggctgagaggtgggagtccagcttctgcgacactgtcagactattc
cagaaatccaacaacaaaatcaaaatgtacccttacacatcctcatcattgagggaagat
ttccagaagaccagtcgtgtgtcagaacgttacctggtcaccagcctgatcctggtggtt
accatggccattctctgctgctctatgcaggactgcgtccgcagcaaaccttggctaggc
ctcctcgggttggtaaccataagcctagccactctcaccgcggctggaatcatcaatctt
actggtgggaagtacaattccactttcctaggagttcctttcgtcatgctaggtcatgga
ttatatggaacttttgaaatgttatcctcctggaggaaaactagagaagaccaacacgtt
aaagagcgaactgcagcagtctatgcagactccatgctttccttttctctcaccactgcc
atgtacctggtcacctttggcataggggccagccctttcacaaacattgaggcagccagg
attttctgctgcaattcctgtattgcaatcttcttcaactacctctatgtactctcgttt
tatggttccagcctcgtgttcaccggctacatagaaaacaattaccagcatagtatcttc
tgtagaaaagtcccaaagcctgaggtattgcaggagaaaccggcatggtacaggtttctc
ctgaccgccagattcagtgaggacacaactgaaggtgaggaagcgaacacttacgagagt
cacctattggtatgtttcctcaaacgctattactgtgactggataaccaacacctatgtc
aagccttttgtagtcctcttttaccttatttatatttcctttgccttaatgggctatctg
caggtcagtgaagggtcagaccttagtaacatcgtagcaactgcaacgcaaaccattgag
tacactactgcccagcaaaagtactttagcaattacagtcctgtgattgggttttacata
tatgagtccatagaatactggaacactagtgtgcaagaagatgttctagaatacaccaag
gggtttgtgcgaatatcctggtttgaaagctatttaaattaccttcggaaactcaatatt
accactggcttacctaagaaaaatttcacagacatgttgagaaattcctttttgaaagcc
ccccaattttcacattttcaagaggacatcatcttctctaaaaagtacaatgatgaagtt
gatgtagtggcctccaggatgtttctggtggccaagacaatggaaacaaacagagaagaa
ctctatgatctcttggagacactgaggagactttcagtcacctccaaagtgaagttcatc
gtcttcaatccatcttttgtgtacatggatcgatatgcttcctctctgggagcccccctg
cacaactcctgcatcagtgctttgtttctgctcttcttttcagcattcctggtggcagat
tctctgattaatgtctggatcactctaacagttgtatctgtggagtttggagtgataggt
ttcatgacattatggaaagtagaactggactgcatttctgttctatgcttaatttatgga
attaactatacaattgacaattgtgctccactcttatccacatttgttctgggcaaggat
ttcacaagaactaaatgggtaaaaaatgccctggaagttcatggggtagctattttacag
agttacctctgctatattgttggtttgattcctctcgcagctgtgccttcaaatctgacc
tgtacactgttcaggtgcttgtttttaatagcatttgtcaccttctttcactgctttgcc
attttacctgtgatactgactttcctgccaccctctaagaaaaaaaggaaagagaagaaa
aatcctgaaaaccgggaagaaattgagtgtgtagaaatggtagatatcgatagtacccga
gtggttgaccaaattacaacagtgtga
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