Cavia porcellus (domestic guinea pig): 100715059 Help Entry 100715059         CDS       T07777                                  Symbol Skiv2l Name (RefSeq) helicase SKI2W   KO K12599   antiviral helicase SKI2 [EC:5.6.2.6] Organism cpoc  Cavia porcellus (domestic guinea pig) Pathway cpoc03018   RNA degradation Brite KEGG Orthology (KO) [BR:cpoc00001]  09120 Genetic Information Processing   09123 Folding, sorting and degradation    03018 RNA degradation     100715059 (Skiv2l)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03019 Messenger RNA biogenesis [BR:cpoc03019]     100715059 (Skiv2l) Enzymes [BR:cpoc01000]  5. Isomerases   5.6  Isomerases altering macromolecular conformation    5.6.2  Enzymes altering nucleic acid conformation     5.6.2.6  RNA 3'-5' helicase      100715059 (Skiv2l) Messenger RNA biogenesis [BR:cpoc03019]  Eukaryotic type   mRNA surveillance and transport factors    Transport factors     eIF4F and regulatory proteins      100715059 (Skiv2l)   mRNA degradation factors    3'-5' decay     Ski complex      100715059 (Skiv2l) BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  DSHCT Ski2_N MTR4_beta-barrel DEAD MTR4-like_stalk DEXQc_Suv3 Helicase_C ResIII DUF3516 HAS-barrel nSTAND3 Motif Other DBs NCBI-GeneID:  100715059 NCBI-ProteinID:  XP_003473999 Ensembl:  ENSCPOG00000001307 LinkDB All DBs Position Unknown AA seq 1243 aa AA seqDB search MIETERLVLPPPDPLNLPLRAVELGCTGRWELLNVPGAPESTLPHGLPPCAPDLQQEAEQ LFLASPAWLPLHGVEHAARKWQRKTDPWSLLAAVGAPVPSDLQAQRHPTTGQILGYKEVL LENTNLSATSSLSLRRPPAPASQSLWGNPTQYPFWPGGMDEPTLTDLSTREEAEEEIDFE KDLLTVPPGFKKGVNFAPQDHPAPAPGLLSLSRLLEPLDLGGGDDESETGQTEECKDVGP ASSCSAPVARASSLEDLVLKETSPVVAPPAPPSPPAQEQWAVPVDVTSPVDDFYRLIPHP AFQWPFEPDVFQKQAILHLEQHNSVFVAAHTSAGKTVVAEYAIALAQKHMTRTIYTSPIK ALSNQKFRDFRNTFGDVGLLTGDVQLHPEASCLIMTTEILRSMLYSGSDVIRDLEWVIFD EVHYINDAERGVVWEEVLIMLPDHVSIVLLSATVPNALEFADWIGRLKRRQIYVISTLTR PIPLEHYLFTGNSPKTQGELFLLLDSRGAFHTKGYYAAVEAKKERMSKHAQTFGAKQPTH QGGPAQDRGVYLSLLASLRTRAQLPVVVFTFSRGRCDEQASGLTSLDLTTSSEKSEIHLF LQRCLARLRGSDRQLPQVLHMSELLHRGLGVHHSGILPILKEIVEMLFSRGLVKVLFATE TFAMGVNMPARTVVFDSMRKHDGSAFRDLLPGEYVQMAGRAGRRGLDPTGTVILLCKGRV PEMADLHRMMMGKPSQLQSQFRLTYTMILNLLRVDALRVEDMMKRSFSEFPSRKDSKAHE QALAELAKKLGSLEEPDVAGQLADLPDYYSWGEELTETRSMIQRRIVESVNGLKSLSVGR VVVVKNQEHHHALGVILQVSSSSTSRVFTTLVLCDKPRSMDSQDRGPATPDVPQPDDLVG FKLFLPEGPCDHTVAKLQPGDMAAITTKVLRVNGEKILEDFSKRQQPKFRKEPPIPAVTT AVQELLRLAQAHPAGPPTLDPVNDLQLKDVAVVEGGLRARKLEELIQGAQCVHSPRFSAQ YLKLRERMQIEKEMERLRFLLSDQSLLLLPEYHQRVEVLRTLGYVDEAGTVKLAGRVACA MSSHELLLTELMFDNALSALRPEEIAALLSGLVCQSPGDPGDQLPSTLKQGVQRVRAVAQ RIGEVQVACGLSQTVEEFVGELNFGLVEVVYEWARGMPFSELAGLSGTPEGLVVRCIQRL AEMCRSLRGAARLVGEPVLGAKMETAATLLRRDIVFAASLYTQ NT seq 3732 nt NT seq  +upstreamnt  +downstreamnt atgattgagacagagcgacttgtgttacctcccccagatcccctgaatctgccccttcgg gctgtggaactgggatgcacagggcgctgggagctgctgaacgtgcctggggctccagag agcacccttccccatggccttcctccctgtgcccctgatctgcagcaggaagcagagcag ctgtttctggcgtccccagcctggctccctctgcatggtgtggagcatgcagctcgaaaa tggcagaggaagacagacccctggtctctcctggctgctgtgggggctccagtcccatca gaccttcaggcccaaagacaccccactacagggcagatactgggctacaaggaggtcctg ctggagaacacgaacctgtcagccacgagctccttgtctctgcgccgccctccagcgcca gcctcccagtctctgtgggggaatccgacacagtatcctttctggccaggcgggatggat gagcccaccctcacagacctgagcacacgtgaggaggcggaggaggagatagacttcgag aaagatcttctcactgtcccacctggcttcaagaaaggggtgaactttgccccccaggat cacccggccccagctcctgggttgctcagcctcagccgtttgctggagcctctggatttg ggtgggggtgatgatgagagcgaaacaggacagacggaagaatgcaaagatgtgggtccg gcctcttcctgcagcgctcctgtggctcgagcaagcagcttggaggacctggtgttgaag gaaacgtccccagtcgtggccccaccagcgcctcccagccctccagctcaggagcagtgg gccgtgcctgtggatgtcacctcccctgttgatgacttctaccgcctcattccccatcca gccttccagtggccattcgagccagacgtgtttcagaaacaggccatcctgcacctggaa cagcacaactctgtcttcgtcgcagctcacacatctgcgggaaagacggtggtggctgaa tatgccatcgccctggctcagaaacacatgacgcgtaccatctacacctcgcccatcaag gctctgagtaaccagaagttccgagacttccgaaacacgtttggggacgtggggctgctc acgggggatgtgcagctgcaccccgaggcctcctgcctcatcatgacaacggagatcctt cgctccatgctgtacagtggctcggatgtcatccgggacctggagtgggtcatcttcgat gaggtccactatatcaacgacgctgagcgtggggtcgtgtgggaggaagttctcatcatg ctcccggaccacgtctccatcgtcctgctgagcgccacagtgcccaacgccctggagttt gccgactggattgggcgactgaagcgccgtcagatctacgtgatcagcacactcacgcgg cccatcccgctggagcattacctgttcacaggaaacagccccaagacccagggcgagctc ttcctgctgctggactcgcgtggggccttccacaccaaggggtactacgctgccgtggag gcgaagaaggagaggatgagcaaacatgcgcagaccttcggggccaagcagcccacgcac cagggcggccctgcacaggaccgaggtgtgtacctgtccctgctggcctccctccgcacc cgggcccagctgccagtagtggtgttcaccttctcccggggccgctgcgacgagcaggcc tcaggcctcacctcgctggacctcaccaccagctcggagaagagcgagatccacctcttc ctgcagcgctgcctggcgaggctccgtggctctgaccgccagctgccccaagtcctgcac atgtccgagctcctgcaccgagggctgggtgtgcaccacagcggcatcctgcccatcctt aaggagatcgtggagatgctgttcagtcgtggcctggtcaaggttctgtttgccaccgag acctttgcaatgggtgtgaacatgccagcccgcactgtggtgttcgactccatgcgcaag cacgatggctcggccttccgggacctgctgcccggggaatacgtgcagatggccgggcgc gcgggccgcaggggcctggaccccacgggtaccgtcatcctgctctgcaagggccgagta cccgagatggctgacctgcaccgaatgatgatggggaagccgtcccagctgcagtcccag ttccgtctcacctacaccatgatcctcaacctgctgcgggtggatgccctcagggtggag gatatgatgaagaggagcttctccgagttcccatctcgaaaggacagcaaggcccacgag caggctctggctgaactagccaagaagctgggctccttggaggagcccgacgtggccggc cagctggctgacctgcctgactactacagctggggtgaagagctgacagagactcggagc atgatccagcggcgcatcgtagaatctgtgaacgggctaaagtccctctcggtgggacgg gtcgtggtcgtgaagaatcaggagcatcaccatgcgctgggtgtgatcttgcaggtctcc tccagctccaccagcagagtcttcaccaccctggtcctgtgtgacaagcccaggtccatg gactcacaggacaggggcccggccactccggatgtgccccagcccgatgatctcgtggga tttaagctgttcctgcctgaagggccctgtgaccacactgtggctaagctccagccggga gacatggcagccatcaccactaaggtgctccgggtgaacggggagaagatcctggaggac ttcagcaagagacagcaaccaaaattcaggaaggagccacccatcccggccgtgaccact gctgtgcaggagctgctgcgcctggcccaggcccacccagcaggaccccccacgcttgac cccgtcaatgacctgcagctgaaggatgtggcagtggtagagggtgggctccgtgcccgg aagctggaggagctgatccagggagctcagtgcgtgcacagcccccgcttttctgcccag tacctgaagctgcgggagcggatgcagattgagaaggagatggagcgactgcgcttcctg ctgtcagaccagtcactgctgctgctgccagagtaccaccagcgcgtagaggtgctccga accctgggctatgtggacgaggcgggcacagtcaagctggccgggcgggtggcttgcgcc atgagcagccatgagctgctcctcacagagctgatgttcgacaatgcactgagtgccctg cggcccgaggagatagccgccctgctgtcgggcctggtctgccagagccccggggaccct ggggatcaactcccaagtaccctcaagcagggcgtgcagcgagtccgggccgtggcccag aggattggtgaggtccaggtggcctgtggcctgagccagacggtggaggaatttgtgggg gagctgaactttgggctggtggaggttgtgtatgagtgggcccggggcatgcccttctcg gagttggcggggctctcggggactcccgagggcctggtggtccgctgcatccagcgcctg gctgagatgtgtcgctcactgcgtggtgcagcccgcctggttggggagcctgtgctaggt gccaagatggagacggcagccaccttgctacgtcgagacattgtctttgcagccagtctt tacacccagtga

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