Cavia porcellus (domestic guinea pig): 100715238
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Entry
100715238 CDS
T07777
Symbol
Atrx
Name
(RefSeq) transcriptional regulator ATRX isoform X1
KO
K10779
transcriptional regulator ATRX
Organism
cpoc
Cavia porcellus (domestic guinea pig)
Pathway
cpoc04110
Cell cycle
Brite
KEGG Orthology (KO) [BR:
cpoc00001
]
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
100715238 (Atrx)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cpoc03000
]
100715238 (Atrx)
03036 Chromosome and associated proteins [BR:
cpoc03036
]
100715238 (Atrx)
Transcription factors [BR:
cpoc03000
]
Eukaryotic type
Zinc finger
Cys4 GATA-factors
100715238 (Atrx)
Chromosome and associated proteins [BR:
cpoc03036
]
Eukaryotic type
Heterochromatin formation proteins
Other heterochromatin formation proteins
100715238 (Atrx)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
ADD_ATRX
Helicase_C
Motif
Other DBs
NCBI-GeneID:
100715238
NCBI-ProteinID:
XP_003471104
Ensembl:
ENSCPOG00000007873
UniProt:
H0VB25
LinkDB
All DBs
Position
Unknown
AA seq
2481 aa
AA seq
DB search
MTAEPMSESKLSTLVQKLHDFLAHSSEESEETSSPPRLVMNQSTDKISGSGNNSDMMENS
KEEGTSSSEKSKSSGASRSKRKPSIVTKYIESDDEKLLDETVNEDASNENSENDITMQSL
PKGTVIVQPEPVLNEDKDDFKGPEFRSRSKMKTENLKKRGEDGLHGIVSCTACGQQVNHF
QKDSIYRHPSLQVLICKNCFKYYMSDDISRDSDGMDEQCRWCAEGGNLICCDFCHNAFCK
KCILRNLGRKELSTIMDENNQWYCYICHPEPLLDLVTACNSVFENLEQLLQQNKKKIKVD
SEKSSKVCDHVPRFSPKKNSSNCNGEEKKFDDSCSRSITYSYSALTVPKEMIKKTKKLIE
TTANMNSSYIKFLKQVTDNSEISSSVKLRQLKAFKSVLDDIKKVHLALEEDLNSEIRALD
VLNKEKNTKEHKIDFKPEIKVRKGEKPCVLERKDISKSEAKLSRKQIENEHMDQSVPTEE
QRANKSTSGEPKKSDRKEEPQYEPASTSEDLDMDIVSVPSSVPEDIFENLENAMEVQCSA
DCQVDGNSATEHELENSFVKLNTPSKDHRGGIKSKTTAKMTRELYVKLTPVSLCNSPIKG
ADCLEVPQDEVCSKSSVLHTKSEKCGLGEENSDKEHLVDNEVPLPLEESDLRRSPRVKTT
PLRRQTETKTATSNSDEESNEMVKDKQQLSDVPMRKNDKRNSSDCAIDNPKPNKLPKSKQ
SEIVDQNSDSDEMLAILKEVSRMSHSSSSDTDINETHKNQKTLCDLKTQPRKDDKGKRKR
KSSTSGSDFDIKKGRSGKSSIISKKKRQNQSESSNYDSELEKEIKNMSKIGATRKTKKRL
PNKKYCDSSEDENHSRKETDNQRQKSLKTVQEGSSDDYERKLENASFSLADQDKTIMELR
DQFCKKHQPSISLDGVDKSSSGKEESLNSPDEKVADTKEKSKHLKTKTYRKVQSGLFDVS
EKFLQKEQSDESSEDDKNKSKKGSDEKEEKTIDPKKKVIKIEQQYESSCDGTEKLPEGEE
ISHFSQSIKQSKNDSTDEEKRGKKLKDKVSKKKEGLSDNVGKLQGKGDSCDSSEDKRSKN
RASSREKKRGNLPEKNSRKKQDCSSSDTEKYSIKDGCNSSDRRLKRIELRERRSLNSKRN
AKDVRSGSSSSDIEESSEDNKKQKKQRSSTKKKSVVVKEKKRSSLRTSTKRKQADITSSS
SDIGDDDQNSVGEGSSDEQKIKPVTENLVLSSHSGFCQSSGDEALSKSVPVTVDDDDDDN
DPENRIAKKMLLEEIKANLSSDEDGSSDDESEEGKKRAEKQNEENAGDEDGKNQVNSESD
SDSEESKKPRYRHRLLRHKLTVSDGESGEEKKTKPKEHKEVKGRNRRKVSSEDSEDSDFQ
ESAVSEEVSDSEDEQRPRTRSAKKVELEENQRSYKQKKKRRRIKVQEDSSSDNKSNSEEE
KEEEEEEEEEEEDENDDSKSPGKGRKKIRKILKDDKLRTETQNALKEEEERRKRIAERER
EREKLREVIEIEDASPTKCPITTKLVLDEDEETKEPLVQVHRNMVIKLKPHQVDGVQFMW
DCCCESVKKTKKSPGSGCILAHCMGLGKTLQVVSFLHTVLLCDKLDFSTALVVCPLNTAL
NWMNEFEKWQEGLRDDEKLEVSELATVKRPQERSYMLQRWQEDGGVMIIGYEMYRNLAQG
RNVKSRKLKEIFNKALVDPGPDFVVCDEGHILKNEASAVSKAMNSIRSRRRIILTGTPLQ
NNLIEYHCMVNFIKENLLGSIKEFRNRFINPIQNGQCADSTMVDVRVMKKRAHILYEMLA
GCVQRKDYTALTKFLPPKHEYVLAVRMTPIQCKLYQYYLDHLTGVGNNSEGGRGKAGAKL
FQDFQMLSRIWTHPWCLQLDYISKENKGYFDEDSMDEFIASDSEETSMSLSSDDYTKKKK
TKGKKGKKDSSSSGSGSDNDVEVIKVWNSRSRGGGEGNVDETGNIPSVSIKLEESKAISS
SNPSSPAPDWYKDFVTDADAEVLEHSGKMVLLFEILRMAEEIGDKVLVFSQSLISLDLIE
DFLELASREKTEDKDKPLIYKGEGKWLRNIDYYRLDGSTTAQSRKKWAEEFNDETNVRGR
LFIISTKAGSLGINLVAANRVIIFDASWNPSYDIQSIFRVYRFGQTKPVYVYRFLAQGTM
EDKIYDRQVTKQSLSFRVVDQQQVERHFTMNELTELYTFEPDLLDDPNSEKKKKRDTPML
PKDTILAELLQIHKEHIVGYHEHDSLLDHKEEEELTEEERKAAWAEYEAEKKGLTMRFNI
PTGTNLPPVTFNSQTPYIPFNLGALSAMSNQQLEDLINQGREKVVEATNSVTAVRIQPLE
DIISAVWKENMNLSEAQVQALALSRQASQELDVKRREAIYNDVLTKQQMLISCVQRILMN
RRLQQQYNQQQQQQMTYQQATLGHLMMPKPPNLIMNPSNYQQIDMRGMYQSVAGGMQPPP
LQRAPPPMRSKNPGPSQGKSI
NT seq
7446 nt
NT seq
+upstream
nt +downstream
nt
atgaccgctgagcccatgagcgaaagcaagttgagtacattggtgcagaagcttcatgac
ttcctggcacattcatcagaagagtctgaagaaacaagttctcctcctcgacttgtgatg
aaccaaagcacagataaaatcagtggttctggaaataactctgatatgatggaaaacagc
aaggaagaagggactagctcttcagaaaaatctaagtcatcaggagcatcacgttcaaaa
aggaaaccttcaattgtaacaaagtatattgaatcagatgatgaaaaacttttagatgaa
actgtaaatgaagatgcttctaatgaaaattcagaaaatgatattactatgcaaagcttg
ccaaaaggtacagtgattgtacaaccagagccagtgctgaatgaagacaaagatgatttt
aaagggcctgaatttagaagcagaagtaaaatgaaaactgaaaatctcaaaaaacgcgga
gaagatgggcttcatggaattgtgagctgtacggcttgtggacaacaggtcaaccatttt
caaaaagattccatttatagacacccctcactgcaagtccttatttgtaagaattgcttt
aagtattacatgagtgatgatattagccgcgactcagatggaatggatgaacaatgtaga
tggtgtgcagaaggtggaaacttgatttgttgcgacttttgccataatgccttttgtaag
aaatgcattctgcgcaaccttggtcgaaaggaactatctacaataatggatgaaaacaac
caatggtattgctacatttgtcacccagaacctttattggacttggtcactgcatgtaac
agcgtatttgaaaatttagaacaattgttgcaacaaaataagaagaaaataaaagttgac
agtgaaaagagtagtaaagtatgtgaccatgtacccagattttccccaaagaagaatagt
tcaaattgtaatggagaagaaaagaaatttgatgattcatgttctcgttctataacctat
tcttattcagcactaactgtgcccaaagagatgattaagaagacaaaaaaactgattgag
accacagccaacatgaactccagttacattaaatttttgaagcaggtaacagataattca
gaaatcagttcttctgtgaagttacgtcaacttaaagcttttaaatctgtgctggatgat
attaagaaggttcatcttgcattggaagaagatttgaattcagagattcgagctttggat
gttttaaacaaagagaaaaataccaaagaacataaaatagatttcaagcctgaaataaaa
gtacggaaaggagaaaaaccttgtgttttagaaaggaaggatatttcaaagtcagaagct
aaattatcaagaaaacaaatagagaatgagcacatggatcagagtgttccaacagaggaa
caaagagcaaataaaagtactagtggtgaacctaagaaatctgataggaaagaggaacct
cagtatgaacctgctagcacttctgaagacttggacatggatattgtatctgtcccttca
tcagttccagaagatatttttgagaatcttgagaatgctatggaagttcagtgctcagct
gattgtcaggtggatggtaatagtgcaactgagcatgaacttgagaattcatttgtaaaa
ttaaatactccttcaaaagaccacagaggagggatcaagtcaaaaactacagctaaaatg
acaagagaattatatgtgaaacttactcctgtttccctttgtaactccccaattaaaggt
gctgattgtctggaagttccacaagatgaagtttgttctaaaagttctgttctacatacc
aaatcagagaaatgtgggcttggtgaggaaaacagtgataaggagcatttggttgataat
gaagttccattacctttagaagaatctgatcttcgaagatctcctcgtgtaaagactaca
cccctgagacgacagacagaaactaaaactgcaacatctaattcagatgaagaaagcaat
gaaatggttaaggacaaacaacagctatcagatgttcccatgagaaaaaatgataaacga
aattcttctgactgtgctatagataaccctaaacctaataaattgcctaaatctaagcag
tcagaaattgtagatcaaaattcagattccgatgaaatgttagcaatcctcaaggaggta
agcaggatgagtcacagttcttcttcagatactgatattaatgagactcataaaaatcaa
aagacattatgtgatttaaagactcaaccaagaaaagatgataaaggaaaaaggaaacga
aaaagttctacttccggttcagattttgatattaaaaaaggtaggtcaggtaaaagctct
ataatttccaaaaagaaacgccaaaaccagtctgagtcttctaattatgactcagaatta
gaaaaagaaataaaaaacatgagtaaaattggggctaccagaaaaaccaaaaaaaggctt
ccaaataaaaaatactgtgattcttctgaagatgaaaatcatagtaggaaagaaacggat
aatcaaaggcagaaaagtttgaagactgtgcaggaaggatcatctgatgattatgaaagg
aaactagagaatgcaagtttctctttggcagatcaagacaagaccattatggaattaaga
gaccaattttgtaaaaagcaccagccaagtatttcccttgatggtgttgataaatcttct
tctggaaaagaagagagtttaaattctccagatgaaaaagttgctgacactaaagaaaag
agcaagcatctaaagaccaaaacatatagaaaagtacagagtggtttatttgatgtctct
gagaaatttttacagaaagagcagagtgatgagtcttctgaggatgataaaaacaagagc
aaaaaaggatctgatgaaaaagaagagaaaaccatagacccaaagaaaaaagtgattaaa
atagaacaacagtatgaatcatcctgtgatggcactgagaaattacctgagggagaagaa
atctctcatttttctcagagcataaaacagagtaagaatgattcaactgatgaagaaaag
agaggtaaaaaactaaaagataaggtgtctaaaaagaaggaggggttatctgataacgtt
gggaaattgcaaggaaaaggagacagttgtgactcttcagaagataaaaggagtaagaat
agagcatctagtagagagaagaaaaggggcaacttgcctgaaaagaattcaaggaagaaa
caagattgctcatcatctgatactgagaaatattccataaaggatggttgtaactcttct
gataggagactgaaaagaatagaattgagggaaagaagaagtttaaattcaaagagaaat
gccaaggacgtacgaagtggctcatcatcatctgatattgaggaaagttctgaagataat
aaaaagcagaagaaacaaagaagctcaactaaaaagaagtcagtcgttgtcaaggagaaa
aagagaagctctttaagaacaagcactaaaaggaagcaagcagatattacttcctcctct
tctgatataggagatgatgatcagaattctgtaggcgaggggagcagtgatgaacagaaa
attaagcctgtgactgaaaatttagtgctgtcttcacacagtggattttgccaatcttca
ggagatgaagccttatctaaatcagtgcctgtcacagtggatgatgatgacgacgacaat
gatcctgagaatagaattgccaagaagatgcttttagaagaaatcaaagcgaatctttcc
tctgatgaggatggatcttcagatgatgaatcagaagaagggaaaaaaagagctgaaaaa
caaaatgaagagaacgcaggagatgaggatggaaaaaatcaagtcaattctgaatcagat
tcagattctgaagaatctaagaagccaagatacagacataggctcttgagacacaaacta
actgtgagtgatggagaatctggagaagaaaaaaagacaaagcctaaagaacataaagaa
gtcaaaggcagaaatagaaggaaggtgagcagtgaagattcagaagattctgattttcag
gaatcagcagttagtgaagaagttagtgattctgaagatgaacagcgacctcgaacaagg
tctgcaaagaaagtagaattagaagaaaatcaaaggagttataaacagaaaaagaaaagg
cgacgcattaaggttcaggaagattcatctagtgacaataagagcaattctgaagaagaa
aaagaagaggaagaggaggaagaggaggaagaggaagatgaaaatgacgattctaagtct
cctggaaaaggcagaaagaaaattcgtaagattcttaaagatgataaactaagaacagaa
acacaaaatgctcttaaagaagaagaggagaggcgcaaacgaattgctgaaagggagcgt
gagcgagagaaactgagagaggttatagaaattgaagatgcttcacccaccaagtgtcca
ataacaaccaaattagttttggatgaagatgaagaaactaaagaaccattagtgcaggtt
catagaaatatggttatcaaattgaagccccatcaagtggatggtgttcagtttatgtgg
gattgctgttgtgagtctgtgaagaaaacaaaaaaatctccaggttcaggatgtattctt
gcccactgcatgggtcttggtaagactttacaggtggtaagtttccttcatactgttctt
ttatgtgacaaattggacttcagtactgctttagtggtttgtcctcttaatactgctttg
aattggatgaatgaatttgagaagtggcaagagggattaagagatgatgagaaacttgag
gtctctgaattagcaactgtgaaacgtcctcaagagagaagctacatgctgcagaggtgg
caagaagatggtggtgttatgatcatagggtatgagatgtatcggaatcttgctcaagga
agaaatgtaaagagtcgaaaacttaaagaaatatttaataaagctttagttgatccaggt
cctgattttgttgtttgtgatgaaggccatattctaaaaaatgaagcatctgctgtttca
aaagcaatgaattctatcagatcacgaaggaggattattttaacaggaacaccacttcaa
aataacctaattgagtatcattgcatggttaactttatcaaggaaaatttgcttggatcc
attaaggaattcagaaatagatttataaatccaatccaaaatggtcagtgtgcagattct
accatggtagatgtcagagtgatgaaaaaacgtgcccacattctctatgagatgttagct
ggatgtgttcagaggaaagattatacagcattaacgaagtttttgcctccaaaacatgaa
tatgttttagctgtgagaatgactcctatacagtgcaagctgtatcagtactacttagat
catttaacaggagtgggtaacaacagtgaaggtggaagaggaaaggcaggtgcaaaactt
ttccaagattttcagatgttaagtagaatctggactcatccttggtgtttacaattggac
tacattagcaaagaaaataagggatattttgatgaagatagtatggatgaatttatagct
tcagattctgaagaaacctccatgagtttaagctccgatgattatacaaaaaagaaaaaa
acaaagggcaaaaagggcaaaaaggatagtagctcaagtggaagtgggagtgacaatgat
gttgaagtgatcaaagtctggaattcaagatctcgtggaggtggtgaaggaaatgtggat
gaaacaggaaacatcccttcagtttccataaagctggaagaaagcaaagccatttcatct
tctaatccaagcagcccagctccagactggtacaaagattttgttacagatgctgatgct
gaagttttagaacattctggaaaaatggtacttctctttgaaattcttcgaatggcagaa
gaaattggggataaagttcttgtttttagccagtccctcatatctctggacttgattgaa
gattttcttgaattggccagtagggagaaaacagaagataaagataaacctcttatttat
aaaggtgaagggaagtggctccgaaacattgactattaccgtttagatggttctactact
gcacagtcaaggaagaagtgggctgaagaatttaatgatgaaactaatgtgagagggcga
ttgtttatcatttccaccaaagcaggatctcttggaattaatctggtagctgctaaccga
gtaattatatttgatgcttcttggaatccatcttatgacatccagagtatattcagagtt
tatcgttttggacaaactaagcctgtttatgtatatcggttcttagctcagggaaccatg
gaagataaaatttatgatcggcaagtaactaagcagtcactatcttttcgagttgttgat
caacagcaggttgagcgtcattttactatgaatgagcttactgaactttatacttttgag
ccagacttactggatgaccctaactcagaaaagaagaagaaacgggatactcccatgctg
ccaaaggatactatccttgcagaacttcttcaaatacataaggaacacattgtagggtat
catgaacatgattctcttttggaccacaaagaagaagaagaattaactgaagaagaaaga
aaagcagcgtgggcagaatatgaagcagaaaagaagggattgaccatgcgtttcaacata
ccaactgggaccaatttaccccctgtcacttttaactctcaaactccttatattcctttc
aatttgggagccctgtcagcaatgagtaatcagcagctggaggacctcattaatcaaggg
agagaaaaagttgtggaagcaacaaatagtgtgacagctgtgaggattcagcctcttgaa
gatataatttcagccgtatggaaggaaaacatgaatctctcagaggcccaagtacaggcc
ttagcattaagtagacaagccagtcaggaacttgatgttaaacgaagagaagcaatctac
aatgatgtattgacaaaacaacagatgttaatcagctgtgttcagcgaatacttatgaac
agaagactccagcagcagtacaatcagcagcaacagcaacaaatgacttaccaacaagcg
accctgggtcacctgatgatgccaaagcctccaaatttaatcatgaatccttctaactac
cagcagattgatatgagaggaatgtatcagtcagtggcaggcggtatgcagccaccacca
ttacagcgtgcaccacccccaatgagaagcaaaaatccaggaccttcccaagggaaatca
atatga
DBGET
integrated database retrieval system
