Cavia porcellus (domestic guinea pig): 100715336
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Entry
100715336 CDS
T07777
Symbol
Taf4b
Name
(RefSeq) transcription initiation factor TFIID subunit 4B
KO
K03129
transcription initiation factor TFIID subunit 4
Organism
cpoc
Cavia porcellus (domestic guinea pig)
Pathway
cpoc03022
Basal transcription factors
cpoc05016
Huntington disease
Brite
KEGG Orthology (KO) [BR:
cpoc00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
100715336 (Taf4b)
09160 Human Diseases
09164 Neurodegenerative disease
05016 Huntington disease
100715336 (Taf4b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cpoc03021
]
100715336 (Taf4b)
03036 Chromosome and associated proteins [BR:
cpoc03036
]
100715336 (Taf4b)
Transcription machinery [BR:
cpoc03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
100715336 (Taf4b)
Coactivators
SAGA/TFTC/STAGA complex
100715336 (Taf4b)
Chromosome and associated proteins [BR:
cpoc03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
TFTC complex
100715336 (Taf4b)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TAF4
TAFH
Init_tRNA_PT
Motif
Other DBs
NCBI-GeneID:
100715336
NCBI-ProteinID:
XP_013012557
Ensembl:
ENSCPOG00000001414
LinkDB
All DBs
Position
Unknown
AA seq
842 aa
AA seq
DB search
MPGMPAGLTESAGAGAPAVVSTSGTIALAPAVATPVRVESTPLALGAVTKAPVSVCVEST
ASQPLRSPVGTLVTKVAPVSALPKLSGGPRLPAPQIVTVKAPNTATIQLPANLQLPPGTV
LIKSNSGQLMLVSPQQGVTRAETASTVSSRPAVPVNAQTVKICTMTNSSSQLIKKVAVAP
GKTLAQIGTSMASTVPNPSSVQSISVPASVVTVTPVKPVNTVTTLKPSDLGASSVPSNEP
GSKAERSAAAQVNLSPAMLENVKKSVVIMEQSSASQLFIVMSDAKIEAEEFTKKLYVELK
SSPQPHLVPFLKKSVIALRQLLPNAQSFIQQCVQETSSNVILSTCTTTVTTSPAVTTSVS
SAQTEKPTIAPTAAVPAPVSVQALNPLSGPVGAKTGIVTLHSVGPATVAGGTTAGTVLLQ
TSKPLVTSVPNAVTTVSLQPEKPVVSGAAVTLALPSVTFGDKSAAALCLPPVKPIAASAG
TKLDKPVIGTPLQIKLTQPGTLLAQPAGMPPTVKVKQLVVQQPSGGIGKQGTTVSHSSAL
TIQKPAQKIPVNTVIPTTSILKQITLPGNKILSLQASTTQKNQIKENGTCFRDEDDINDV
TSMAGVNLSEENACILQTNSELVGTLIQSCKDEPFLFIGALQKRILDIGKKHDITEFNSD
AVNLISHATQERLRGLLEKLTTIAQHRMTTYKASENYILSSDTKSQLKFLEKLDQLEKQR
KDLEEREMLLKAARSRSNKEDPEQLRLKQKAKELQQLELAQIQHRDANLTALAAIGPRKK
RPLESGNEGSKDNLACGTSSLTATKQFLRPRITRICLRDLIFCMEQEREMKYSRALYRAL
LK
NT seq
2529 nt
NT seq
+upstream
nt +downstream
nt
atgccggggatgcccgcgggcctcaccgagtcggccggcgccggtgcgcccgcggtcgtg
agcacctcggggaccatagcactggcccccgccgtggcgacccctgtccgcgtggagagc
accccgctggccctgggcgccgtgactaaggcgcccgtcagcgtctgcgtggagtccacc
gcgtcccagccgctgcggtcccccgttgggaccctggtcaccaaagtggctcctgtcagt
gctcttcccaaactcagcggcggccccaggctgcccgctccccagattgtcaccgtgaaa
gcccccaacaccgcgacgatccagctgcctgctaatctgcagcttcctccaggaacagtt
ttgatcaaaagtaacagcggtcagttgatgttggtatctcctcagcaaggggtgacaaga
gcagagactgcgagtaccgtatcttccaggccagcagtaccagtcaacgcccaaactgtc
aaaatctgtacgatgacgaattctagctcacagttaatcaagaaagtagcagtggcacca
ggtaaaacattggcacaaataggaactagtatggcatccactgttccaaacccttcctca
gttcaatctatatctgtgccagccagtgttgtcacagttactcctgtaaagccggtgaat
actgtaactaccctgaagccttcagatttgggagcatcatctgtaccctcaaatgagcct
ggttccaaagcagagcgctcagcagctgctcaggttaatctttctccggcaatgctagaa
aatgtgaagaaatctgtcgtaataatggagcagtcttcagccagtcagctcttcattgtg
atgtctgatgcaaaaattgaagcggaagaatttactaagaaactgtatgttgaacttaag
tcgtcacctcagcctcacctagttcctttcctcaagaaaagtgtgattgccttacgacaa
cttctgcctaacgcccagagcttcattcagcagtgtgttcaggaaacttccagcaacgtc
atcctttccacctgtaccacaacagtcacaacttctcctgcggtgacgacttctgtgtcc
tcagcccagactgaaaagcccaccatcgctcccactgcagcagtgcccgcacccgtgtct
gtgcaagctctgaacccactcagtggtccagttggagcaaaaactggcattgtgacccta
cattctgtgggcccagctactgtggcaggtggaacaacagctggaactgttttgctccag
acctcaaaaccactggtgacatcagtaccaaatgcagtgacaacagtttctctgcagcct
gagaagccagtcgtctctggagcagcagttacactggctcttccatcagtaacttttgga
gacaagtcagctgcagctctttgtcttccacctgtgaagcccattgctgcttctgccggg
accaagctggacaagcctgtgattggcacgcccctccaaatcaaactcacccagccgggc
accctcctcgcacagccagctgggatgccaccaaccgtcaaagtcaagcaactagtggta
cagcagccgtcaggaggcattggaaaacaagggaccacagtttcccattcctcagcactg
accattcagaaacctgcacagaagattccagtgaacactgtaatacctactacttccatt
ctaaagcaaataactttgcctggaaataaaattttgtcgcttcaagcatctactacccag
aaaaatcaaataaaagagaatggaacatgtttcagagatgaagatgacatcaatgatgtg
acttccatggcaggagtcaacctcagtgaagaaaatgcctgcatcttacaaacaaactct
gaattggtcggcacactcattcagtcatgcaaagatgaaccgtttctttttattggagct
ctacaaaagagaatcttagacattggtaaaaagcatgacattacagaatttaactctgat
gctgtgaacttgatctcccatgcaacacaagagagattacgaggccttctagaaaaactg
actacaattgctcagcatcgaatgactacttacaaggcaagtgaaaattacatcctgtct
agtgatactaagtcacagctcaaatttcttgagaagctggatcaattggagaagcagaga
aaggacttagaagaaagagaaatgctacttaaggctgccaggagtcgttctaataaagaa
gacccagaacagctgagattaaagcagaaagccaaagagttgcagcagttggagcttgcc
cagatacagcacagagatgctaatctcactgctcttgcagctattggaccaagaaagaag
agaccactagaatctggaaacgagggatcaaaagacaatcttgcttgtggaacatccagc
ctgacagccaccaaacagtttctccgaccaagaatcacgagaatctgcctcagggacttg
atattctgtatggaacaggaaagggagatgaagtactcacgagcgctgtaccgtgccctt
ctgaagtga
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