KEGG   Cavia porcellus (domestic guinea pig): 100715444
Entry
100715444         CDS       T07777                                 
Symbol
Wdr82
Name
(RefSeq) WD repeat-containing protein 82
  KO
K14962  COMPASS component SWD2
Organism
cpoc  Cavia porcellus (domestic guinea pig)
Pathway
cpoc03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:cpoc00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    100715444 (Wdr82)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:cpoc03019]
    100715444 (Wdr82)
   03036 Chromosome and associated proteins [BR:cpoc03036]
    100715444 (Wdr82)
Messenger RNA biogenesis [BR:cpoc03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    Cleavage and polyadenylation specificity factor (CPSF) complex
     100715444 (Wdr82)
Chromosome and associated proteins [BR:cpoc03036]
 Eukaryotic type
  Histone modification proteins
   HMT complexes
    COMPASS/SET1 complex
     100715444 (Wdr82)
    COMPASS/SET1 complex (yeast)
     100715444 (Wdr82)
SSDB
Motif
Pfam: Beta-prop_WDR5 Beta-prop_THOC3 WD40_Prp19 WD40 Beta-prop_IFT122_1st Beta-prop_WDR3_1st Beta-prop_EML_2 WD40_CDC20-Fz WD40_WDHD1_1st WD40_Gbeta Beta-prop_TEP1_2nd Beta-prop_CAF1B_HIR1 ANAPC4_WD40 Beta-prop_WDR90_POC16_2nd WDR55 EIF3I Beta-prop_WDR36-Utp21_2nd Beta-prop_WDR3_2nd Beta-prop_Aladin Beta-prop_WDR36-Utp21_1st Beta-prop_NOL10_N WD40_MABP1-WDR62_2nd Beta-prop_TEP1_C Beta-prop_EML WDR90_beta-prop_4th Beta-prop_VPS8 Beta-prop_WDR19_1st WD40_MABP1-WDR62_1st Beta-prop_SPT8 Beta-prop_IFT140_1st MinC_C Beta-prop_ACSF4
Other DBs
NCBI-GeneID: 100715444
NCBI-ProteinID: XP_013015080
Ensembl: ENSCPOG00000010513
LinkDB
Position
Unknown
AA seq 345 aa
MKLTDSVLRSFRVAKVFRENSDKINCFDFSPNGETVISSSDDDSIVLYDCQEGKPKRTLY
SKKYGVDLIRYTHAANTVVYSSNKIDGENSAPATKWGREDGEALLISGNPGNGREFFLRQ
GLHPIFAHILLQLLFMLMHCRVVALSMSPVDDTFISGSLDKTIRLWDLRSPNCQGLMHLQ
GKPVCSFDPEGLIFAAGVNSEMVKLYDLRSFDKGPFATFKMQYDRTCEWTGLKFSNDGKL
ILISTNGSFIRLIDAFKGVVMHTFGGYANSKAVTLEASFTPDSQFIMIGSEDGKIHVWNG
ESGIKVAVLDGKHTGPITCLQFNPKFMTFASACSNMAFWLPTIDD
NT seq 1038 nt   +upstreamnt  +downstreamnt
atgaagctgaccgacagcgtgctgcggagcttccgcgtcgccaaggtgttccgcgagaac
tcggacaagattaactgttttgacttcagccccaacggcgagacggtcatctcgagcagc
gacgatgactccatcgtgctctatgactgccaggagggcaaaccaaagagaaccctgtac
agtaagaaatatggtgtggacctcatcagatacacgcatgcggcaaacacagttgtttac
agctctaacaaaatagatggtgagaacagcgcaccagccaccaagtggggcagagaggat
ggtgaagccctgctcatctctgggaatccaggtaatgggagggaattttttcttaggcag
ggcttgcatccaatttttgctcatattttgcttcaactcctatttatgttgatgcattgc
agggtggtggccttatccatgtcacctgtggatgacaccttcatttctgggtctcttgat
aaaaccattcgactttgggatctccggtctcctaattgccagggcctcatgcatctacag
ggcaagccagtttgttcatttgatccagaagggttaatttttgctgccggtgttaactct
gaaatggtcaagctttatgaccttcgttcttttgacaaggggccgtttgcaacctttaag
atgcagtatgatcggacttgtgaatggacaggacttaagttcagcaatgatggcaagctc
atactgatttccaccaatggcagcttcatccgtctcatcgatgcattcaaaggggtggtg
atgcacacatttgggggttatgccaacagcaaagctgtcacactagaggcttcatttact
ccagactctcagtttattatgattggttcagaagatggcaaaatccatgtgtggaatggt
gagagtggcataaaggtagcagtattggatggtaaacacacaggccccatcacctgtttg
cagttcaaccctaagttcatgacatttgccagcgcgtgttccaacatggccttctggttg
cccaccattgatgactga

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