Cavia porcellus (domestic guinea pig): 100715543
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Entry
100715543 CDS
T07777
Name
(RefSeq) ATP-dependent RNA helicase DDX1
KO
K13177
ATP-dependent RNA helicase DDX1 [EC:
5.6.2.7
]
Organism
cpoc
Cavia porcellus (domestic guinea pig)
Brite
KEGG Orthology (KO) [BR:
cpoc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cpoc03041
]
100715543
03016 Transfer RNA biogenesis [BR:
cpoc03016
]
100715543
Enzymes [BR:
cpoc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
100715543
Spliceosome [BR:
cpoc03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
100715543
Transfer RNA biogenesis [BR:
cpoc03016
]
Eukaryotic type
tRNA spricing factors
tRNA splicing ligase complex
100715543
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
SPRY
ResIII
CMS1
SNF2-rel_dom
Paramyxo_PNT
Motif
Other DBs
NCBI-GeneID:
100715543
NCBI-ProteinID:
XP_003460822
Ensembl:
ENSCPOG00000032467
UniProt:
A0A286XR46
LinkDB
All DBs
Position
Unknown
AA seq
502 aa
AA seq
DB search
MAAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPV
IQIVYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGAAFAIGPDGVCCQSREVKEWH
GCRATKGLMKGKHYYEVSCHDQGLCRVGWSTMQASLDLGTDKFGFGFGGTGKKSHNKQFD
NYGEEFTMHDTIGCYLDIEKGHVKFSKNGKDLGLAFEIPAHMKNQALFPACVLKNAELKF
NFGEEDFKFPPKDGFVALCKAPESYIVKSQHTGNAQVTQTKFLPNAPKALIVEPSRELAE
QTLNNVKQFKKYVDNPKLRELLIIGGVAARDQLSVLENGVDIVVGTPGRLDDLVSTGKLN
LSQVRFLVLDEADGLLSQGYSDFINRMHSQIPQITSDGKRLQVIVCSATLHSFDVKKLSE
KIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKNHIRTDDVHAKDNTRPGAN
SAEMWSEAIKVLKGEYTVRAIK
NT seq
1506 nt
NT seq
+upstream
nt +downstream
nt
atggcggccttctccgaaatgggtgttatgcctgagattgcccaggctgtagaagagatg
gattggcttctccctactgatatccaggcggagtcgatcccgctgatcctcggagggggt
gatgtgctcatggctgcagaaacaggaagtgggaaaaccggggcattcagtattccagtt
atccagatagtatatgaaactctgaaagaccaacaggaaggcaaaaaaggaaaaacaacg
attaaaactggtgcttcagtgctcaacaaatggcagatgaacccgtatgatagaggcgct
gcttttgcaattgggccggatggggtttgttgtcaaagcagagaagtaaaggagtggcat
ggatgccgagctaccaaaggactgatgaaagggaaacactactatgaggtatcttgtcac
gaccaagggctctgcagagtcgggtggtctaccatgcaggcatccttagaccttggtact
gacaagtttggatttggctttggtggaacaggaaagaaatcccacaataaacagtttgat
aattatggagaggaattcactatgcatgataccattggctgttacctagatattgagaaa
ggacacgtaaagttctccaaaaatggaaaagacctggggctggcctttgaaatccccgca
cacatgaaaaaccaggccctctttcctgcctgtgttctgaagaatgctgagctgaaattt
aactttggtgaagaagacttcaagtttccacccaaagatggatttgttgctctttgcaag
gccccagagagttacatcgtcaagtcacagcacacaggtaatgcacaggtgacacagacg
aagtttctccccaacgctccaaaggcactcatcgttgaaccttcccgggagctcgctgag
caaactttgaataatgtcaagcagtttaagaaatacgttgataaccctaaattaagggag
cttctcataattggaggggttgccgcacgggaccagctctctgttttggaaaacggggtg
gatattgtcgtaggaactccaggaaggctggatgacttggtgtcaactggaaagctgaac
ctgtctcaagtccggttcctggtcctggacgaagcagatggtcttctttctcaaggttat
tctgactttataaatcggatgcacagccagattcctcagattacttctgatggaaaaaga
ctccaggtgatcgtttgctctgctaccttgcattctttcgatgtgaagaagctgtctgag
aagataatgcattttcccacctgggtggatttaaaaggagaagattctgttccagacacc
gtgcaccatgtggtggtccccgtgaaccccaagaccgacaggctctgggagcggctgggg
aagaaccacatccggactgatgatgtccatgcaaaagataacacgagacctggagccaac
agtgcagagatgtggtctgaagctatcaaagtcctgaagggggagtacactgtccgggcc
atcaag
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