Cavia porcellus (domestic guinea pig): 100715565
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Entry
100715565 CDS
T07777
Symbol
Nbn
Name
(RefSeq) nibrin isoform X1
KO
K10867
nibrin
Organism
cpoc
Cavia porcellus (domestic guinea pig)
Pathway
cpoc03440
Homologous recombination
cpoc04218
Cellular senescence
Brite
KEGG Orthology (KO) [BR:
cpoc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
100715565 (Nbn)
09140 Cellular Processes
09143 Cell growth and death
04218 Cellular senescence
100715565 (Nbn)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cpoc03032
]
100715565 (Nbn)
03400 DNA repair and recombination proteins [BR:
cpoc03400
]
100715565 (Nbn)
DNA replication proteins [BR:
cpoc03032
]
Eukaryotic type
DNA Replication Termination Factors
MRN complex
100715565 (Nbn)
DNA repair and recombination proteins [BR:
cpoc03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
MRN(MRX) complex
100715565 (Nbn)
BRCA1-C complex
100715565 (Nbn)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nbs1_C
NIBRIN_BRCT_II
FHA
BRCT
RTT107_BRCT_5
Yop-YscD_cpl
PTCB-BRCT
Motif
Other DBs
NCBI-GeneID:
100715565
NCBI-ProteinID:
XP_003479937
Ensembl:
ENSCPOG00000013698
LinkDB
All DBs
Position
Unknown
AA seq
752 aa
AA seq
DB search
MWKLLPAAGAPREPCRLLTDVEYVVGRKNCAILIDNDQSISRNHAVLTANISVTNLQQTH
EIPTLTIKDNSKYGTFVNEEKMQNGLSRTLKTGDRVTFGVFESKFRVEYEPLVACSSCLD
VSGKTALNQAILQLGGLTVNNWTEECTHLVMVSIKVTIKTICALICGCPIVKPEYFTEFV
KAIESKQQLPQVESFYPPVDEPAINGKTIDLSGRQERKQIFKGKTFIFLNAKQHKKLSSA
VVFGGGEARLITEENEEKDSFFSAPGMCVVDTGITDTQILIPDSQKKWIHSIVDTLQRQG
LRPIPEAEIGLAVIFMTTENYCNPQGQPHTGLKTRTPEPSLSVGWPVSEKLQPIAPVNTT
TYVADSESDQADTCMYSSEKLKEIKISKMEQKFGTFSQDTSNIKDSPKPSSSSNIKSNSL
VRVKIQNYELSPAKFPSVTKSRGQASQQQQSNTIRNYFQPSPKKRERDEENQEMSSSKAA
RLEMSCSLLEQTQPSITSQWKNKEQNLSHSEPMDTKSENLFSDDIDLKSNVKNSTSKSVS
TENLRSKKRKETDVAIEDKQLEQLFKNPRSELEIKVKVEKQEEDVNVRKKSRVDTETNKN
FDDEIMPESDKTSQEGEVEKKCDLKELQWSTKEIPNNDELQDSSEMLPTKVLMTEFRSLV
VNNPSHRNLYGVSNDHGHQLKNFKKFKKVAFPGAGKLPHIIGGSDLIAYHAGKNAELEEW
LRQEMEVQKQHAKEESLADDLFRYNPNVKRRR
NT seq
2259 nt
NT seq
+upstream
nt +downstream
nt
atgtggaagctgctccccgccgctggcgcgcctcgagaaccgtgtagactgttgactgat
gttgagtatgttgttggaaggaaaaactgtgccattctaattgacaacgatcagtccatc
agtcgaaatcatgctgtgttaacagctaacatttctgtaactaacttgcagcaaacgcat
gaaattcctactttgacaataaaagataattctaagtatggtacctttgttaatgaggaa
aaaatgcagaatggcctttctcgaactttgaagacaggggatagagttacctttggagtg
tttgaaagtaaattcagagtagaatatgagcctttggttgcatgctcctcttgtttagat
gtctctgggaaaactgctttaaatcaagctatattacagcttggaggacttacagtaaac
aactggacagaagaatgtactcaccttgttatggtatcaattaaagttaccattaaaaca
atatgtgcacttatttgtggatgtccaattgtaaagccagaatactttactgaatttgtt
aaagcaattgagtccaagcaacagctgccacaagttgaaagtttttacccacctgttgat
gaaccggctattaatggtaaaactattgatctgtcaggacgacaggaaagaaaacaaatc
ttcaaaggaaaaacatttatatttttaaatgctaaacagcataagaaattaagctcagca
gttgtttttggaggtggagaagctagattgataacagaagaaaatgaagaaaaagacagt
tttttttcagctcctgggatgtgtgttgttgatacaggcataacagatacacagatctta
attcctgactcgcagaaaaaatggattcactcaattgtggatacactccagaggcagggt
cttagacctattcctgaagcagaaattggattggcagttattttcatgactacagagaat
tactgtaatccccagggccagccccacacaggattaaagacaaggactccagagccaagc
ctttcagtaggctggccagtcagtgaaaaactacagcccattgctcctgtgaacactaca
acatatgtagctgactcagaatcggaccaggcagatacatgtatgtattccagtgaaaag
ttaaaagaaataaaaatctccaaaatggaacaaaaatttggaacattttcacaagataca
tccaatataaaagactctcccaaaccaagctctagtagtaacataaaatcaaattctcta
gttagggtaaaaatccaaaactatgagctttcaccagctaaattcccaagtgtgactaaa
agtagaggtcaagcttctcaacagcagcaatcaaataccattagaaactactttcaacca
tctcccaaaaaaagagaaagggatgaagaaaatcaagaaatgtcttcatccaaagcagca
agattagaaatgtcttgttctcttttagagcaaacacaaccttctataacctcacaatgg
aaaaacaaagaacaaaatctatctcacagtgaacctatggacacaaaatcagaaaactta
ttttcagatgatatagatttaaaatccaatgtgaaaaactctaccagtaaatctgtttct
acagaaaacttgagatcaaagaaaagaaaagaaactgatgtggccatagaagataaacag
ttggagcagttattcaagaacccaagatcagagttggaaattaaagtgaaagttgaaaaa
caagaggaagacgtcaatgtcagaaaaaaatcaagggtggatacagaaacaaataaaaat
tttgatgatgaaataatgccagaaagtgacaaaacatctcaagaaggtgaagttgagaag
aaatgtgacctcaaagaattacagtggtcaactaaagaaatacctaacaatgatgaactt
caggacagcagtgagatgcttccaacaaaggtgttaatgactgaatttagatcactggtg
gttaataaccccagtcacagaaatctgtatggagtaagtaatgatcatggtcatcaacta
aagaatttcaagaaattcaaaaaggtcgcatttcctggagcaggtaaactcccacacatt
attggaggatcagatctcatagcttatcatgctggaaagaatgcagaattagaagaatgg
ttgagacaggaaatggaggtacaaaagcaacatgcaaaggaagagtctcttgctgatgat
ctctttagatataatcctaatgtaaaaaggagaagataa
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