KEGG   Cavia porcellus (domestic guinea pig): 100715565
Entry
100715565         CDS       T07777                                 
Symbol
Nbn
Name
(RefSeq) nibrin isoform X1
  KO
K10867  nibrin
Organism
cpoc  Cavia porcellus (domestic guinea pig)
Pathway
cpoc03440  Homologous recombination
cpoc04218  Cellular senescence
Brite
KEGG Orthology (KO) [BR:cpoc00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03440 Homologous recombination
    100715565 (Nbn)
 09140 Cellular Processes
  09143 Cell growth and death
   04218 Cellular senescence
    100715565 (Nbn)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:cpoc03032]
    100715565 (Nbn)
   03400 DNA repair and recombination proteins [BR:cpoc03400]
    100715565 (Nbn)
DNA replication proteins [BR:cpoc03032]
 Eukaryotic type
  DNA Replication Termination Factors
   MRN complex
    100715565 (Nbn)
DNA repair and recombination proteins [BR:cpoc03400]
 Eukaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    MRN(MRX) complex
     100715565 (Nbn)
    BRCA1-C complex
     100715565 (Nbn)
SSDB
Motif
Pfam: Nbs1_C NIBRIN_BRCT_II FHA BRCT RTT107_BRCT_5 Yop-YscD_cpl PTCB-BRCT
Other DBs
NCBI-GeneID: 100715565
NCBI-ProteinID: XP_003479937
Ensembl: ENSCPOG00000013698
LinkDB
Position
Unknown
AA seq 752 aa
MWKLLPAAGAPREPCRLLTDVEYVVGRKNCAILIDNDQSISRNHAVLTANISVTNLQQTH
EIPTLTIKDNSKYGTFVNEEKMQNGLSRTLKTGDRVTFGVFESKFRVEYEPLVACSSCLD
VSGKTALNQAILQLGGLTVNNWTEECTHLVMVSIKVTIKTICALICGCPIVKPEYFTEFV
KAIESKQQLPQVESFYPPVDEPAINGKTIDLSGRQERKQIFKGKTFIFLNAKQHKKLSSA
VVFGGGEARLITEENEEKDSFFSAPGMCVVDTGITDTQILIPDSQKKWIHSIVDTLQRQG
LRPIPEAEIGLAVIFMTTENYCNPQGQPHTGLKTRTPEPSLSVGWPVSEKLQPIAPVNTT
TYVADSESDQADTCMYSSEKLKEIKISKMEQKFGTFSQDTSNIKDSPKPSSSSNIKSNSL
VRVKIQNYELSPAKFPSVTKSRGQASQQQQSNTIRNYFQPSPKKRERDEENQEMSSSKAA
RLEMSCSLLEQTQPSITSQWKNKEQNLSHSEPMDTKSENLFSDDIDLKSNVKNSTSKSVS
TENLRSKKRKETDVAIEDKQLEQLFKNPRSELEIKVKVEKQEEDVNVRKKSRVDTETNKN
FDDEIMPESDKTSQEGEVEKKCDLKELQWSTKEIPNNDELQDSSEMLPTKVLMTEFRSLV
VNNPSHRNLYGVSNDHGHQLKNFKKFKKVAFPGAGKLPHIIGGSDLIAYHAGKNAELEEW
LRQEMEVQKQHAKEESLADDLFRYNPNVKRRR
NT seq 2259 nt   +upstreamnt  +downstreamnt
atgtggaagctgctccccgccgctggcgcgcctcgagaaccgtgtagactgttgactgat
gttgagtatgttgttggaaggaaaaactgtgccattctaattgacaacgatcagtccatc
agtcgaaatcatgctgtgttaacagctaacatttctgtaactaacttgcagcaaacgcat
gaaattcctactttgacaataaaagataattctaagtatggtacctttgttaatgaggaa
aaaatgcagaatggcctttctcgaactttgaagacaggggatagagttacctttggagtg
tttgaaagtaaattcagagtagaatatgagcctttggttgcatgctcctcttgtttagat
gtctctgggaaaactgctttaaatcaagctatattacagcttggaggacttacagtaaac
aactggacagaagaatgtactcaccttgttatggtatcaattaaagttaccattaaaaca
atatgtgcacttatttgtggatgtccaattgtaaagccagaatactttactgaatttgtt
aaagcaattgagtccaagcaacagctgccacaagttgaaagtttttacccacctgttgat
gaaccggctattaatggtaaaactattgatctgtcaggacgacaggaaagaaaacaaatc
ttcaaaggaaaaacatttatatttttaaatgctaaacagcataagaaattaagctcagca
gttgtttttggaggtggagaagctagattgataacagaagaaaatgaagaaaaagacagt
tttttttcagctcctgggatgtgtgttgttgatacaggcataacagatacacagatctta
attcctgactcgcagaaaaaatggattcactcaattgtggatacactccagaggcagggt
cttagacctattcctgaagcagaaattggattggcagttattttcatgactacagagaat
tactgtaatccccagggccagccccacacaggattaaagacaaggactccagagccaagc
ctttcagtaggctggccagtcagtgaaaaactacagcccattgctcctgtgaacactaca
acatatgtagctgactcagaatcggaccaggcagatacatgtatgtattccagtgaaaag
ttaaaagaaataaaaatctccaaaatggaacaaaaatttggaacattttcacaagataca
tccaatataaaagactctcccaaaccaagctctagtagtaacataaaatcaaattctcta
gttagggtaaaaatccaaaactatgagctttcaccagctaaattcccaagtgtgactaaa
agtagaggtcaagcttctcaacagcagcaatcaaataccattagaaactactttcaacca
tctcccaaaaaaagagaaagggatgaagaaaatcaagaaatgtcttcatccaaagcagca
agattagaaatgtcttgttctcttttagagcaaacacaaccttctataacctcacaatgg
aaaaacaaagaacaaaatctatctcacagtgaacctatggacacaaaatcagaaaactta
ttttcagatgatatagatttaaaatccaatgtgaaaaactctaccagtaaatctgtttct
acagaaaacttgagatcaaagaaaagaaaagaaactgatgtggccatagaagataaacag
ttggagcagttattcaagaacccaagatcagagttggaaattaaagtgaaagttgaaaaa
caagaggaagacgtcaatgtcagaaaaaaatcaagggtggatacagaaacaaataaaaat
tttgatgatgaaataatgccagaaagtgacaaaacatctcaagaaggtgaagttgagaag
aaatgtgacctcaaagaattacagtggtcaactaaagaaatacctaacaatgatgaactt
caggacagcagtgagatgcttccaacaaaggtgttaatgactgaatttagatcactggtg
gttaataaccccagtcacagaaatctgtatggagtaagtaatgatcatggtcatcaacta
aagaatttcaagaaattcaaaaaggtcgcatttcctggagcaggtaaactcccacacatt
attggaggatcagatctcatagcttatcatgctggaaagaatgcagaattagaagaatgg
ttgagacaggaaatggaggtacaaaagcaacatgcaaaggaagagtctcttgctgatgat
ctctttagatataatcctaatgtaaaaaggagaagataa

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