Cavia porcellus (domestic guinea pig): 100715575
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Entry
100715575 CDS
T07777
Symbol
Abca6
Name
(RefSeq) ATP-binding cassette sub-family A member 6
KO
K05649
ATP-binding cassette, subfamily A (ABC1), member 6
Organism
cpoc
Cavia porcellus (domestic guinea pig)
Pathway
cpoc02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
cpoc00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
100715575 (Abca6)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
cpoc02000
]
100715575 (Abca6)
Transporters [BR:
cpoc02000
]
ABC transporters, eukaryotic type
ABCA (ABC1) subfamily
ABCA5, 6, 8, 9, 10 subgroups
100715575 (Abca6)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ABC_tran
ABC2_membrane_3
AAA_21
R1_ABCA1
RsgA_GTPase
AAA_29
nSTAND1
Peptidase_C2
MMR_HSR1
AAA_22
AAA_23
AAA_15
Dynamin_N
MMS21_N
Motif
Other DBs
NCBI-GeneID:
100715575
NCBI-ProteinID:
XP_023418851
Ensembl:
ENSCPOG00000036808
LinkDB
All DBs
Position
Unknown
AA seq
1465 aa
AA seq
DB search
MINFHVHCPRYWNNGFVALQTVINAAIIEITTNHSVMEELMSVTAINMKTLPFVSKSVPQ
IGIFILFCLIYFFPFIYFVSLDVTKERKKHKNLMKTMGLQDSAFWLSWGLIYAGFIFIIS
IFITIIVTSIKIFIMTGFVVIFTLLCLYGLSLVALAFLMSVLLRKAALTNLIMLLLTIFW
GCVGFVAFYVQIPSSLKWILSIWSPFTFAVGMAQIFQLDYNSTGVTFPDPSGDSYIMISI
FAMLVFDCFIYLLLALYFDKILPYGNECHYSPLFFLNSSSCFQSRKTDNKVFEKDTDSEL
HFDDYFEPVAPEFQGKEAIRIRNVKKDYKEKSEKVEALKGFNFDIYESQITAILGHSGAG
KSSLLNILSGLSVPTQGSVTVYDKNISEMQDLEEIRKMIGVCPQYNVQFDILTVKENLSL
FAKIKGIHPHEVEQKVRQVLLELDMENIQNNLAEDLSEGQKRKLTFGITILGDPQVLLLD
EPTAGLDPFSRYRVWSFLKERRENHVILFSTQLVDEADILADRKVIMFNGRLKCAGSSVF
LKRKWDLGYYLSVYKNEICDQEQITSFINHHIPDAKLKTENKEKLVYTLPLERTNKFPDL
FRDLDKCSSQGMMSYDISMSTLSEVFMNIEGKSTINQGFGHLEMMSNSESFNEMQPAYPS
LPEVQKPVSDMERWRMQVCAIARLRFLKLIRERKTLLILLLIFGMSLCPLIIERITYYMM
QQTVDWEFKTDSYFLSPGQLPQDFRTSLLIINHTESDIEDFIQSLKHQNILLEVDDFKNR
NGTNALSYNGAIIVSGKQKDYRFSVVCNTKRMHCFPVLMNIISNGLLRMFNQTQYLRLER
SPLSLDMMVVWTGLVDGSLFLLFVVCSISPYIAMSSVSDYKKKAKRQLWISGLYPSAYWF
GQALVDINLFNLILLLVHLIGYLIRITDNYISRRTIFGMVTTTFGYAVSLIFLTYVISFV
FRKRRKYSGLWTFCFFILTSVLDSLIWENFHLTTIISTMIFVPSSTMNVFLMFLLERAYA
RYTDSEETKFDLSEAELLVCLIPYFQALLFIFVLRCMELKYGKNVMRKDPVFRISPQSPE
ARPNPEEPGDEDEDVQAERIRTSTALTTSNLDEKPTIIASCLHKEYAGQKKNCFSKRKKK
LATRNISFSIKKGEVFGLLGPNGAGKSSSIRMIAGITKPTAGEVKLKECGTALDDQGEDM
VTLPGYCPQENVLWPRLTMKEHLEVYAAVKGLRKGDSAVIISRLVNTFKLHEHLNMPVRN
LAAGTTRKLCFVLSILGDSPVLLLDEPSTGIDPAGLHQIWQAIQMSVKNKDRAILLTTHY
LAEAEALCDRVAIMVSGRLRCIGSIQHLKRKFGKDYILQLKVEEPSQVPLVHSEILKCFP
QAAQPERYSTLLTYKLPIGNVYPLSQAFHKLEQVKHTLNLEDYSLSQCTLENVFLEFSKE
QELENVNEEVDETMRWKLLPHSEEP
NT seq
4398 nt
NT seq
+upstream
nt +downstream
nt
atgataaattttcatgtgcattgtcccagatactggaataatggatttgtggctttacaa
actgtcattaatgctgctattatagaaatcacaacaaatcactctgtgatggaggagttg
atgtcagtcactgctataaatatgaagacattaccgtttgtttctaaaagcgttcctcaa
attggaatctttattttattctgcttgatttacttcttcccatttatatattttgtatca
cttgatgttactaaagaaagaaaaaagcataaaaatttaatgaaaacgatgggtctacaa
gattcagcattctggttgtcctggggtttgatttatgctggctttatcttcattatttct
atattcattacaattattgtaacatccatcaaaattttcatcatgactggctttgtggtc
atatttacacttttgtgcttatatggcttatctttggttgccttagctttcctgatgagt
gtgctgctgcggaaagctgccctcaccaatctgattatgttgctccttacaatcttctgg
ggatgtgtgggattcgtggcattttatgtgcaaattccttcatccctgaagtggattttg
agtatttggagcccttttacttttgctgttggaatggcacagattttccagctggattat
aactctactggtgtaacttttcctgacccttcaggggattcatatataatgatatcaata
tttgccatgttggtttttgattgttttatctacttattattggcattatacttcgacaaa
attttaccctatgggaacgaatgtcattattctccattatttttcttgaattcatcatct
tgtttccaaagccgaaaaactgataataaggtctttgagaaagacacagattctgagctc
cactttgatgattattttgaacctgtagctcctgaattccaaggaaaagaagccatcaga
atcaggaatgttaaaaaggactataaagaaaagtctgaaaaagtagaagcattaaaaggc
tttaattttgacatatatgaaagtcaaatcacagcaattttgggtcatagtggagctgga
aaatcttctttattaaacatccttagtggattatctgttccaacacaaggatcagttact
gtctatgataaaaacatctctgaaatgcaagacttggaggaaatcaggaagatgattggt
gtttgtcctcaatataatgtgcaatttgatatactcacagtgaaggaaaacctcagtctc
ttcgctaaaataaaagggattcatccacatgaagtggaacaaaaggtacgacaagtttta
ttggaactggacatggaaaatattcagaataatcttgctgaagacttaagtgaaggacag
aaaagaaagttgacctttggaatcaccattttaggagatcctcaagttttgctcttagat
gaaccaactgctggactggatcccttttcaagataccgagtgtggagtttcttaaaagaa
cgtagagaaaatcatgtgatcctcttcagtactcagttggtggatgaagctgacattctg
gctgacagaaaagtgatcatgttcaacggcagattgaagtgtgcaggctcttccgtattt
ttgaagagaaaatgggatcttggctattatttaagtgtctataagaatgaaatatgtgat
caagaacaaataacatctttcattaatcatcacatccctgacgctaaattaaaaacagaa
aacaaagaaaagcttgtgtatactttgcctttggaaaggacaaataaatttccagatctc
ttcagggatcttgataagtgttctagccaaggcatgatgagttatgatatctctatgtca
actctgagtgaagtcttcatgaatattgaagggaaatcaactatcaaccaaggttttggc
catctagaaatgatgagcaactcagaaagcttcaatgaaatgcagccagcttatccttct
ctccctgaagtacagaagcctgtgagtgacatggaacgctggaggatgcaagtctgtgca
atagcacggcttcgtttcttaaagttaatacgtgaaagaaaaacacttttgatcctgcta
ttgatatttggaatgtcattatgccctttgattattgaaagaataacttattatatgatg
cagcagactgttgactgggaatttaaaacagactcgtatttcctctctcctggacaactt
cctcaagacttccgtaccagcctgctgatcatcaatcacacagaatcagatattgaagac
tttatacagtcactgaagcatcaaaatatacttctggaagtagatgatttcaaaaacaga
aatggcactaatgctctttcatacaatggagctatcatagtttctggtaaacaaaaggat
tatagattttcagttgtgtgcaataccaagaggatgcactgctttcctgtccttatgaat
attatcagtaatgggctacttagaatgtttaatcaaacacagtatcttcgacttgagcga
agtccactttctttggatatgatggttgtctggactggactggtagatggctctctgttc
ttactgtttgttgtatgcagcatttctccttacattgccatgagcagtgtcagtgattac
aaaaagaaggctaagcgtcagctatggatttcgggcctctacccttctgcttattggttt
ggacaagcactggtggacattaacctcttcaatttaattctccttttggtgcatttaatt
ggttacctaataagaattacagacaattatatttcaaggagaactatatttggtatggtt
actactacatttggttatgcagtttcccttatcttcttgacatatgtaatatcatttgtt
tttcgaaagaggagaaaatatagtggtctgtggacattttgcttctttatcttgactagc
gtgctagacagcttgatatgggaaaatttccacctaactacaataatttctaccatgata
tttgttccttcatctaccatgaatgtgtttctaatgtttttgttagagagagcctatgcg
cgctacacagactctgaagaaacaaagtttgacttgagcgaagctgaacttctagtatgc
ctaataccttattttcaggctttactattcatttttgttctaagatgcatggagctaaaa
tacggaaagaatgtaatgcgaaaagatccggttttcagaatttctccccaaagtccagaa
gctcgaccaaatccagaagaacctggagatgaagatgaagacgttcaagcagaaagaata
agaacgtcaactgctctgaccacttcaaacttagatgagaaaccaaccataattgccagc
tgtctgcacaaagaatatgcaggccagaagaaaaattgcttttcaaagaggaagaagaaa
ttagcaacaagaaatatctctttctctattaagaaaggtgaagtttttggattgctagga
cccaatggtgctggtaaaagttcctctattaggatgatagctgggatcacaaagccaacg
gctggagaggtaaaactgaaagaatgtggtacagctttggatgatcagggagaggacatg
gtcacactcccgggttactgtcctcaggagaacgtgctgtggcccagactgacaatgaaa
gaacacctggaggtgtacgctgctgtgaaaggactcagaaaaggggactctgcggttatc
atttcacgattggtgaatactttcaaactgcatgaacatctgaatatgccggtgagaaac
ttagcagcaggaaccaccaggaagctgtgttttgtgctgagcatcctgggagattcacct
gttctgcttctggatgaaccatctacaggcatagatccagcagggctgcatcagatatgg
caagcaattcagatgtctgttaaaaacaaagacagggccatcctcctgaccacccattac
ctggctgaagccgaggctctgtgtgaccgcgtggctatcatggtgtcaggaaggctgaga
tgcattggctccatccaacacctgaaaagaaaatttggcaaggattacattctacagcta
aaagtagaggaaccttctcaagtgcctttggtccactctgagattctgaaatgtttccca
caggctgcacagccagaaaggtactccaccttgctgacttataagctgccaataggcaat
gtttaccctttatctcaggcatttcacaaactggaacaagtgaaacacacccttaatctg
gaagactatagcctgtctcagtgcacactggaaaatgtattcctagagttttctaaggag
caagagctggaaaatgttaatgaagaagttgatgaaaccatgagatggaaactccttcct
cattcagaagagccttaa
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integrated database retrieval system
