Cavia porcellus (domestic guinea pig): 100715594
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Entry
100715594 CDS
T07777
Symbol
Arid1b
Name
(RefSeq) LOW QUALITY PROTEIN: AT-rich interactive domain-containing protein 1B
KO
K11653
AT-rich interactive domain-containing protein 1
Organism
cpoc
Cavia porcellus (domestic guinea pig)
Pathway
cpoc03082
ATP-dependent chromatin remodeling
cpoc04714
Thermogenesis
cpoc05225
Hepatocellular carcinoma
Brite
KEGG Orthology (KO) [BR:
cpoc00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
100715594 (Arid1b)
09150 Organismal Systems
09159 Environmental adaptation
04714 Thermogenesis
100715594 (Arid1b)
09160 Human Diseases
09162 Cancer: specific types
05225 Hepatocellular carcinoma
100715594 (Arid1b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cpoc03000
]
100715594 (Arid1b)
03021 Transcription machinery [BR:
cpoc03021
]
100715594 (Arid1b)
03036 Chromosome and associated proteins [BR:
cpoc03036
]
100715594 (Arid1b)
Transcription factors [BR:
cpoc03000
]
Eukaryotic type
Helix-turn-helix
ARID
100715594 (Arid1b)
Transcription machinery [BR:
cpoc03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
100715594 (Arid1b)
Chromosome and associated proteins [BR:
cpoc03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
100715594 (Arid1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
BAF250_C
ARID
Presenilin
Motif
Other DBs
NCBI-GeneID:
100715594
NCBI-ProteinID:
XP_005008737
LinkDB
All DBs
Position
Unknown
AA seq
1831 aa
AA seq
DB search
MRHPGVQWKLHGLDLGETFGSFVGFGACFPCHPAGAQFPGLECRCVLEVVRVNPMTSGSP
MDPMVMKRPQLYGMGSNPHSQPQQSSPYPGGSYGPPGAQRYPLSIQGRAPGALGGMQYPQ
QQMPPQYGQQGVSGYCQQGQQPYYNQQPQPPHLPPQAQYLPSPSQQRYQSQQDMSQEGYG
SRSQPPLASGKPNHETDLNLIQQERPSSLPDLSGSIDDLPTGTEATLSSAVSASGSTSSQ
GDQSNPAQSPFSPHASPHLSSIPGGPSPSPVGSPVGSNQSRSGPISPASIPGSQMPPQPP
GNQSESSSHPALSQSPMPQERGFMAGTQRNPQMSQYGPQQTGPSMSPHPSPGGQMHPGMS
SFQQSNSSGTYGPQMSQYGPQGNYSRPPTYSGVPGASYSGPGPGMGINVNNQMHGQGPSQ
PCGAMPLGRMPSAGMQNRPFPGNMSSVTPSSPGISQQGGPGMGPPMPTVNRKAQEAAAAV
MQAAANSAQSRQGSFPGMNQSGLMASSSPYSQPMNNSSGLMNTQGPTYSMTPAMVNSATA
SMGLADMMSPGESKLPMPLKADGKEEGTPQSESKSKDSYSSQGISQPPTPGNLPVPSPMS
PSSASISSFHGDESDSISSPGWPKTPSSPKSSSSTTTGEKITKVYELGNEPERKLWVDRY
LTFMEERGSPVSSLPAVGKKPLDLFRLYVCVKEIGGLAQVNKNKKWRELATNLNVGTSSS
AASSLKKQYIQYLFAFECKIERGEEPPPEVFSTGDTKKQPKLQPPSPANSGSLQGPQTPQ
STGSNSMAEVPGDLKPPTPASTPHGQIAPMQGGRSSTISVHDPFSDVSDSSFPKRNSMTP
NAPYQQGMSMPDMMGRMPYEPNKXPFGGMRKVPGSSEPFMTQGQMPNSSMQDMYNQSPSG
AMSNLGMGQRQQFPYGASYDRRHEPYGQQYPGQGPPAGQPPYGAHQPGLYPQQPNYKRHM
DGMYGPPAKRHEGDMYNMQYGNQQQEMYNQYGSSYSGPDRRPMQGQYPYPYNRERIQGPG
QMQPHGIPPQMMGGPMQSSSSEGPQQNMWAARNDMPYPYQNRQGPGGPAQAPPYPGMSRT
DDMMVPDQRINHESQWPSHVSQRQPYMSSSASMQPITRPPQTSYQTPPSLPNHISRAPSP
ASFQRSLENRMSPSKSPFLPTMKMPKVMPTVPTSQVTGPPPQPPPIRREITFPPGSVEAS
QPVLKQRRKITSKDIVTPEAWRVMMSLKSGLLAESTWALDTINILLYDDSTVATFNLSQL
SGFLELLVEYYRKCLIDIFGILMEYEVGDPSQKALDHNAVRKEDSQSSADDSGKEEEDTE
CLDEDEEEDEDEEDREKTEADAKGIAALSAADATADPKEKPKQASKFDKLPIKIVKKNNL
FVVDRSDKLGRVQEFNSGLLHWQLGGGDTTEHIQTHFESKMEIPPRRRPPPPSNYTGRKR
ESEGKGDCEEQPEKSIIATIDDVLSARPGALPEDTNPGPQPESSKFPFGIQQAKSHRNIK
LLEDEPRSRDETPLCTIAHWQDSLAKRCICVSNIVRSLSFVPGNDAEMSKHPGLVLILGK
LILLHHEHPERKRAPQTYEKEEDEDKGVACSKDEWWWDCLEVLRDNTLVTLANISGQLDL
SAYTESICLPILDGLLHWMVCPSAEAQDPFPTVGPNSVLSPQRLVLETLCKLSIQDNNVD
LILATPPFSRQEKFYATLVRYVGDRKNPVCREMSMALLSNLAQGDALAARAIAVQKGSIG
NLISVLEDGVTMAQYQQSQHNLMHMQPPPLEPPSVDMMCRAAKALLAMARVDENRSEFLL
HEGRLLDISISAVLNSLVASVICDVLFQIAV
NT seq
5496 nt
NT seq
+upstream
nt +downstream
nt
atgaggcatcctggtgtgcaatggaaacttcatggcctggaccttggtgagacctttggc
tcatttgtgggcttcggtgcctgttttccctgccatccagcaggggctcaatttcctggt
ctggaatgtcgctgtgtgctggaggttgtcagggtgaatcctatgacttctggcagtcca
atggacccaatggtgatgaagagacctcagttgtatgggatgggcagtaatccccattcc
cagccgcaacaaagtagtccctacccaggaggctcctatggccccccaggtgcacagcgg
taccccctcagcatacagggccgggctccaggggccctcggaggcatgcagtaccctcag
cagcagatgccacctcagtatggacaacaaggtgtgagtggttactgccaacaaggccaa
cagccatattacaaccagcagccacagcccccacatctaccaccccaggcacagtatctg
ccatccccatcccagcagagataccagtcacagcaggacatgtctcaggaaggctatggc
tctagatctcaacctcccctggcctctggaaaacccaaccatgaaacagacttgaattta
atacaacaagaaagaccatcaagtttaccagacctgtctggctccatcgatgacctcccc
acaggaacagaagcaacattaagctcagcagttagtgcatctgggtctacaagcagtcaa
ggggatcagagcaacccagcccagtcacctttctctccacatgcatcaccccatctctcc
agcatccctggagggccctcaccttctccagttggctctcctgtaggaagcaatcagtca
cgatctggcccaatttctcctgcaagtattccaggcagccagatgccccctcagccacct
ggaaaccagtcagaatccagttcccatcctgccttgagccagtcaccaatgccacaagaa
agaggttttatggcaggcacacaaagaaatcctcagatgtctcagtatgggcctcaacag
acaggaccatccatgtcgcctcatccttctcctgggggccagatgcatcctggaatgagt
agctttcagcagagtaattcaagtgggacctacggtccacagatgagccagtatggacca
caaggtaactactccagacccccaacgtatagtggggtgcccggtgcaagttacagtggc
ccagggcccgggatgggtatcaatgtcaacaaccagatgcatggacaagggccaagccag
ccatgtggtgctatgcccctgggacgaatgccatcagctgggatgcagaacagaccattt
cctggaaacatgagcagcgtgacccccagttctcctggcatatctcagcagggtgggcca
ggaatggggccaccaatgcctactgtgaaccgtaaggcacaggaggctgctgcagctgtg
atgcaggctgctgcaaactcagcacaaagcaggcaaggcagttttcctggcatgaaccag
agtggactcatggcttccagctctccctacagccagcccatgaacaacagctctggccta
atgaacacacaagggccgacttatagtatgacaccagctatggtgaacagcgcgacagca
tctatgggtcttgcagatatgatgtctcctggtgaatccaagctgcccatgcctctcaaa
gcagatggcaaagaagaaggcactccacagtctgagagcaagtcaaaggatagctacagc
tctcagggtatttctcagcccccaaccccaggcaacctgccagtcccttccccaatgtcc
cccagctctgctagcatctcctcctttcatggagatgagagcgatagcattagcagccca
ggctggccaaagactccatcaagccctaagtccagctcatccaccaccacaggggagaag
atcacaaaggtgtatgagctgggaaatgagcccgagaggaaactgtgggttgaccgatac
ttgactttcatggaagagaggggctcccctgtctccagtttgcccgcagtgggcaaaaag
cccctagacctgttccgactctatgtttgtgtcaaagagattggaggtttggcacaggtt
aataaaaacaagaagtggcgtgagctggcaaccaacctaaatgttggcacttcaagcagc
gcagcaagctccctgaaaaagcagtatattcagtacctatttgcctttgagtgcaagatt
gaaagaggggaggagcccccaccagaagtcttcagcacaggggatacaaagaagcagccc
aagcttcagccgccatctcctgctaactcaggatccctgcaaggcccgcagacgccgcag
tcaacaggcagcaattccatggcagaggttccaggtgacctgaagccccctaccccagct
tccacccctcatggacaaattgctccaatgcaaggtggaagaagcagtacaatcagtgtg
catgacccattctcagatgtgagtgattcatcgtttccaaaaaggaattctatgactcca
aatgccccataccaacaaggcatgagcatgccagacatgatgggaaggatgccctatgaa
cccaacaagngaccctttgggggaatgagaaaagtgcctggaagcagtgagccctttatg
actcaaggacagatgcccaacagcagcatgcaggacatgtataaccaaagtccctcagga
gcaatgtccaatctggggatggggcagaggcagcagtttccctatggggcaagttatgac
cgaaggcatgaaccttatgggcagcagtatccaggccaaggtcctcctgcaggacagcca
ccgtatggagcgcaccagcctggcctgtatccacagcagccgaattacaagcgccacatg
gatggcatgtatgggcctccagccaagcgacatgagggagacatgtacaacatgcagtat
ggcaaccagcagcaagagatgtataaccagtacggaagctcttactctggcccggaccga
aggcccatgcagggacagtacccatatccctataatagggagaggatacagggcccaggc
cagatgcagccccatggaatcccacctcagatgatgggaggcccgatgcaatcatcttcc
agtgaagggcctcagcagaacatgtgggcagcacgcaacgatatgccttatccctaccag
aacagacagggccctggcggccctgcacaggcacccccttatccagggatgagccgcaca
gatgatatgatggtacctgatcagaggataaatcatgagagccagtggccttctcatgtc
agccaacgccagccttacatgtcatcttcagcttccatgcagcccatcacacgcccacct
cagacatcctaccagacgccaccatcactgccaaaccacatctccagggcacccagccca
gcttccttccagcgctccctggaaaaccgcatgtctccaagcaagtctccctttctgccc
accatgaagatgccgaaggtcatgcctactgtccccacatcccaggtcactgggccaccc
cctcagccaccccccatcagaagggaaattacctttcctcctggctcagtggaagcatca
cagccagtcctgaaacaaaggcgaaagattacctcaaaagatattgttactcctgaggca
tggcgtgtgatgatgtcccttaagtcaggtcttctggctgaaagcacttgggctttggac
actatcaacattcttctctatgatgacagcactgtcgctactttcaatctctctcagtta
tctggatttctcgaacttttagtagagtactatagaaaatgcctgattgacatttttgga
attcttatggaatatgaagtgggagaccccagccaaaaagcacttgatcacaatgcagtg
agaaaagaagatagccagtcctctgctgacgattctgggaaggaggaagaagacactgag
tgtcttgatgaagatgaggaagaggacgaggacgaggaagaccgtgaaaagacagaagct
gatgccaagggcattgctgccctcagcgctgcagatgccactgcagaccccaaggagaag
cccaaacaggccagtaagtttgacaagctaccaataaagattgtcaaaaagaacaaccta
tttgttgttgaccggtcggacaagctgggccgagtgcaagagttcaacagcgggcttcta
cactggcagcttgggggtggcgacaccactgagcacatccagactcactttgagagcaag
atggaaatcccacctcgcagacgcccaccacccccttctaactacacgggtagaaagaga
gagtcagaaggcaaaggtgattgcgaagagcagccagagaaaagcatcatagccactatt
gacgatgtcctgtctgctcggccaggggccttgcctgaagacacaaaccctgggccccag
ccagaaagcagcaagttcccctttggtatccagcaagcaaaaagtcaccggaacatcaag
ctgctggaggatgagccgaggagccgagacgagacgcccctgtgcaccatcgcacactgg
caggactcactggctaagcgctgcatctgtgtgtccaacatcgtgcggagcttatctttc
gtgcctggcaatgatgccgagatgtccaaacatccaggcttggtgctgatcctggggaag
ctgatccttcttcaccatgaacatccagagcggaaacgagcaccacagacctatgagaaa
gaggaggacgaggacaagggggtggcctgcagcaaagatgagtggtggtgggactgcctt
gaggtcttgcgggataacacactggtcacgttggccaacatctccgggcagctagacttg
tctgcctacacagaaagcatctgcttgccaattctggatggcttgctgcactggatggta
tgcccatctgcggaggcgcaagacccgtttcccaccgtgggacctaactcagtcctgtca
cctcagagacttgtgctggagaccctctgtaaactcagtatccaggacaataatgtggac
ctgatcttggccacacctccatttagtcgtcaggagaaattctatgctactttagttagg
tacgttggggatcgcaaaaacccagtctgtcgagaaatgtccatggcgcttttatcgaac
cttgcccagggggatgcattagcagcgagggcaatagctgtgcagaagggaagcattgga
aacttgataagcgtgctggaggacggggtcacaatggcgcaataccagcagagccagcat
aacctcatgcacatgcagcccccgcctctggaaccacctagcgtagacatgatgtgcagg
gcagccaaggctttgctggccatggccagagtggacgagaaccgctcggaattccttttg
cacgagggccggttgctggatatctcaatatcagctgtcctgaactctctggttgcatct
gtcatctgtgatgtactatttcagattgcagtatga
DBGET
integrated database retrieval system
