Cavia porcellus (domestic guinea pig): 100715966
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Entry
100715966 CDS
T07777
Symbol
Dhx58
Name
(RefSeq) probable ATP-dependent RNA helicase DHX58 isoform X2
KO
K12649
ATP-dependent RNA helicase DHX58 [EC:
5.6.2.6
]
Organism
cpoc
Cavia porcellus (domestic guinea pig)
Pathway
cpoc04622
RIG-I-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
cpoc00001
]
09150 Organismal Systems
09151 Immune system
04622 RIG-I-like receptor signaling pathway
100715966 (Dhx58)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
cpoc04054
]
100715966 (Dhx58)
Enzymes [BR:
cpoc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
100715966 (Dhx58)
Pattern recognition receptors [BR:
cpoc04054
]
Cytoplasmic pattern recognition receptors
RIG-I-like receptors
100715966 (Dhx58)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RIG-I_C
ResIII
DEAD
Helicase_C
SWI2_SNF2
RIG-I_C-RD
AAA_19
Terminase_6N
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
100715966
NCBI-ProteinID:
XP_005002503
Ensembl:
ENSCPOG00000023721
LinkDB
All DBs
Position
Unknown
AA seq
624 aa
AA seq
DB search
MELRPYQWEVIMPALEGKNIIIWLPTGAGKTRAAAYVAKRHLETVDGAKVVVLVNRVHLV
TQHAEEFSLVLGGRWAMTTLSGDMGARAGFGHTARKHDLLICTAELLQMALNSTEEEEHM
ELTAFSLIVVDECHHTHKDTVYNVILSQYLEHKLQSPRRLPQVLGLTASPGTGGNSKLEG
AISHILQLCANLDAWRIMSPKIHRPALLEHRPEPCKQYDLCQQRSQDPFGDLIKKLMAQI
HNHPEMPDLTQDFGTQMYEQQVVQLSKTAAEAGLQQRRVLALHLRRYNDALLIHDTVRAV
DALASLQDFYNRERNTKSQILRAERWLLDLFDDHKDELTQLATHGPENPKLETLEQILRV
KFKDPANPRGIIFTRTRQSTQSLLLWLQQQPSLQLVDIRAQMLIGAGNSSQSAHMTQRNQ
QEVIQKFRMGSLNLLVATSVAEEGLDIAKCSVVVRYGLLTNEISMVQARGRARASQSVYS
FVATEGSRELRRELTNERLETLMEQAVATVQRMDPAEYQAKIRDLQLAAVVKRAARASQK
DRQRQQFPAECVQLLCINCMVAVGHGSDLRKVEGTHHVNVNPTFSGTSDLPVFPEPLCHA
AGTGAQGVKCLVLSHMGVHAVLAS
NT seq
1875 nt
NT seq
+upstream
nt +downstream
nt
atggagctgcgaccctaccagtgggaggtgatcatgcctgccctggagggcaaaaacatc
atcatctggctgcccacgggtgctggcaagacacgggcggccgcctatgtggccaagagg
cacctggagaccgtggacggagccaaggtggtggttctggtcaacagggtgcacctggtg
acccagcacgctgaggagttcagcctcgtgctgggtggacgctgggccatgacaaccttg
agtggggacatgggagcacgagcaggctttggccacacagcccgaaaacacgacctgctc
atctgcactgctgagctgctgcagatggcgctgaacagcacagaggaggaggagcacatg
gagctcacagccttctccctcattgtggtggatgagtgtcaccacacgcacaaggacacc
gtctacaacgtcatcttgagccagtacctggagcacaagctgcagagcccgcggcgcctg
ccgcaggtgctgggtctcacggcctcaccaggcaccggcgggaactccaagctcgagggg
gccatcagtcacatcctgcagctctgtgccaacctggatgcgtggcgcatcatgtcgccc
aagatccaccgcccagcactgctggagcaccgtcctgagccctgcaagcagtacgacttg
tgccagcagcgcagccaggacccatttggggacttgataaagaagcttatggctcagatc
cacaaccatccagaaatgcccgacttgacccaagactttgggacgcagatgtatgagcag
caggtggttcagctgtccaagacagccgcggaggcagggctccagcaacgccgagtcctt
gcccttcacctgcgccgttacaatgatgcgctgctcatccacgacacagtgcgcgccgtg
gacgcgctggcctcgctgcaggacttctacaaccgggagcgcaacacaaagagtcagatc
ctgcgcgctgagcgctggctgctagacctgttcgacgaccacaaggacgaactaacccag
ttggcgacacatggccctgagaacccgaaactggaaacactagagcagattctgcgggtg
aaattcaaggaccccgccaacccccggggcatcatcttcacccgaactcgccagagcacc
cagtccctgctgctctggctccagcagcagccgagcctgcagctagtggacatcagggcc
cagatgctgattggggcggggaacagcagccagagcgcacacatgacccagaggaaccag
caggaagtgatccagaagttccgcatgggcagcctgaatcttctggtggccacaagcgtg
gcggaggaggggctggacattgccaagtgcagcgtggtggtgcgctacgggttgctgacc
aacgagatctctatggtccaggctcggggccgtgcacgggccagccagagtgtgtactca
tttgtggccacggagggcagccgggagctgcggcgtgaattgaccaatgagaggctggag
accctgatggagcaggcagtggccaccgtgcagaggatggaccctgccgagtaccaggcc
aagatccgggatctacagcttgcagccgtggtcaagcgtgctgcccgggcctctcagaag
gacagacagcggcaacagttccctgccgagtgcgtgcagctcctctgcatcaactgcatg
gtggccgtgggtcacggcagcgacctgcggaaggtggaaggcacccaccatgtcaacgtg
aacccaaccttctcaggaaccagtgacctgcctgtgttcccagagccactgtgccacgca
gcaggaactggagcccagggtgtcaaatgcttggtgctgtcccacatgggggtacacgca
gttctggcttcatag
DBGET
integrated database retrieval system
