Cavia porcellus (domestic guinea pig): 100716118
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Entry
100716118 CDS
T07777
Symbol
Thoc5
Name
(RefSeq) THO complex subunit 5 homolog isoform X1
KO
K13174
THO complex subunit 5
Organism
cpoc
Cavia porcellus (domestic guinea pig)
Pathway
cpoc03013
Nucleocytoplasmic transport
cpoc03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cpoc00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
100716118 (Thoc5)
09122 Translation
03013 Nucleocytoplasmic transport
100716118 (Thoc5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cpoc03019
]
100716118 (Thoc5)
03041 Spliceosome [BR:
cpoc03041
]
100716118 (Thoc5)
Messenger RNA biogenesis [BR:
cpoc03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
100716118 (Thoc5)
Spliceosome [BR:
cpoc03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
100716118 (Thoc5)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
FmiP_Thoc5
Motif
Other DBs
NCBI-GeneID:
100716118
NCBI-ProteinID:
XP_005007333
Ensembl:
ENSCPOG00000010974
LinkDB
All DBs
Position
Unknown
AA seq
695 aa
AA seq
DB search
MSTESSKKRKPKVIRSDGTPTEGKRNRSDTEQEGRYYSEEAEVDLRDPGRDYELYKYTCQ
ELQRLMAEIQDLKSRGGKDAAIEIEERRIQSCVHFMTLKKLNRLAHIRLKKGRDQTHEAK
QKVDAYHLQLQNLLYEVMHLQKEITKCLEFKSKHEEIDLVSLEEFYKEAPTDISKAEVTM
GDPHQQTLARLDWELEQRKRLAEKYRECLSNKEKILKEIEVKKEYLSSLQPRLNSIMQAS
LPVQEYLFMPFDQAHKQYETARHLPPPLYVLFVQATAYGQACAHMKSSSQPPRQDKTLSV
AIEGSVDEAKALFKPPDDSQDDESDSDAEEEQTTKRRRPTLGVQLDDKRKEMLKRHPLSV
MVDLKCKDDSVLHLTFYYLMNLNILTVKAKVTTATELITPISAGDLLSPDSVLSCLYPGD
HGKKTPNPANQYQFDKVGILTLRDYVLDLGHPYLWVQKLGGLHFPKEQPQHTVIADHSLS
ASHMETTMKLLKTRVQSRLALHKQFASLEHGIVPVTSDCQYLFPAKVVSRLVKWVTIVHE
DYMELHYTKDIVEAGLAGDTNLYYLALIERGTAKLQAAVVLNPGYSSIPPIFQLCLNWKG
EKTNSNDDNIRAMESEVNVCYKELCGPRPSHQLLTNQLQRLCVLLDVYLETESHDDSVEG
PKEFPQEKMCLRLFRGPSRMKPFKYNHPQGFFSHR
NT seq
2088 nt
NT seq
+upstream
nt +downstream
nt
atgtcaacagaatcaagcaaaaaacggaaacccaaagtgatccgcagtgatggaactcca
actgaaggaaagcgaaatcgatcagacactgagcaggaaggtagatactacagtgaagag
gctgaggtggacctgcgggaccctggcagagactatgagttgtacaagtacacatgccag
gagctacagaggctaatggctgagatccaagacctgaagagcagaggcggcaaggatgcg
gcaattgaaattgaagaacggaggatccagagctgtgtgcatttcatgactctaaagaaa
cttaaccgattagctcacatcaggttgaagaaaggaagagatcagacccatgaggccaag
caaaaagtagatgcctatcatctgcagctccagaacttgctgtatgaggtgatgcatctg
cagaaggagatcaccaagtgtctggagttcaagtcaaagcatgaagaaattgatctggtc
agcttagaagagttttacaaggaggctccaacagacatcagcaaggctgaagtcaccatg
ggagaccctcatcaacagaccctggcacggctggactgggagctggagcagcgaaaaaga
ttggcagagaagtaccgagagtgcctgtccaacaaggaaaaaatcctcaaagagattgag
gtgaagaaggagtacctgagcagccttcagcctcggctcaatagcatcatgcaggcttcc
ctcccagtgcaggagtacctgttcatgccatttgaccaggctcacaaacagtatgaaaca
gctagacacctgccacctcccctctacgtgctctttgtgcaggctaccgcctatgggcag
gcatgtgctcatatgaaatcttcctcccagccccctagacaggataagaccttgtctgtg
gccatcgaaggcagtgtggatgaagccaaggctctgttcaagcctcctgatgattcccaa
gatgatgagagtgactcagatgctgaggaggagcagaccacgaagcgacggcgacccaca
ctaggagttcagttggatgacaagcgcaaggagatgctgaagagacaccctctgtccgtc
atggttgacctgaaatgcaaagatgatagcgtgcttcacctgactttctactacctcatg
aacctcaacatcctgactgtgaaagccaaagtgacaactgccacggagctgatcaccccc
atcagtgcaggggacttgctatctcctgactcagtgctaagctgtttgtatcctggtgat
catggaaagaaaactccaaatccagccaatcaataccagttcgataaagttggtatttta
actttgagagactatgtacttgacctaggtcacccctatttgtgggtacagaaactggga
ggcctccacttccccaaagagcaaccccagcacacagtgattgctgatcactcgctgagt
gccagccacatggaaacaactatgaagctgctgaagaccagggtgcagtcccggctggcc
ctccacaaacagtttgcatccctggaacatggtattgtgccagttaccagtgattgccag
tacctcttccctgccaaggttgtctctcgcttggtgaagtgggtgacaattgtccatgaa
gattatatggaattgcattacactaaggacattgtggaagcaggactcgctggggacacc
aatctctactacctggcgctcattgagaggggcacagccaaactccaggctgctgtggta
ttgaaccctggctactcctccatcccacccattttccagctctgtttgaactggaaagga
gagaaaaccaacagcaatgatgacaacattcgggccatggagagtgaggtcaatgtgtgc
tacaaggagctctgtggtcctcggcccagtcatcagcttttgaccaaccagctgcagcgg
ctatgtgtgctcctcgatgtctacctggagactgagagccatgacgacagtgtggaggga
cccaaggaatttccccaagagaagatgtgtttgcggcttttcaggggtccaagtaggatg
aagccctttaaatataaccatcctcagggattcttcagccatcgatga
DBGET
integrated database retrieval system
