Cavia porcellus (domestic guinea pig): 100716227
Help
Entry
100716227 CDS
T07777
Symbol
Nup98
Name
(RefSeq) LOW QUALITY PROTEIN: nuclear pore complex protein Nup98-Nup96
KO
K14297
nuclear pore complex protein Nup98-Nup96
Organism
cpoc
Cavia porcellus (domestic guinea pig)
Pathway
cpoc03013
Nucleocytoplasmic transport
cpoc05014
Amyotrophic lateral sclerosis
cpoc05164
Influenza A
Brite
KEGG Orthology (KO) [BR:
cpoc00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
100716227 (Nup98)
09160 Human Diseases
09172 Infectious disease: viral
05164 Influenza A
100716227 (Nup98)
09164 Neurodegenerative disease
05014 Amyotrophic lateral sclerosis
100716227 (Nup98)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cpoc03019
]
100716227 (Nup98)
03036 Chromosome and associated proteins [BR:
cpoc03036
]
100716227 (Nup98)
Messenger RNA biogenesis [BR:
cpoc03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
100716227 (Nup98)
Chromosome and associated proteins [BR:
cpoc03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
100716227 (Nup98)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nup96
Nucleoporin2
Nup98_GLEBS
Nucleoporin_FG
Motif
Other DBs
NCBI-GeneID:
100716227
NCBI-ProteinID:
XP_003463464
Ensembl:
ENSCPOG00000006504
LinkDB
All DBs
Position
Unknown
AA seq
1768 aa
AA seq
DB search
MFNKSFGAPFGGGTSGFGTTSSFGQNTGFGTTTGGAFGTSAFGSSTNTGGLFGNSQTKPG
GLFGNNSFSQPATSTSTGFGFGTSTGTSNSLFGTASTGTGLFSSQNNAFAQNKPSGFGSN
FTAALTGTTIKFNPPTGTDTMVKAGVSTNISTKHQCITAMKEYESKSLEELRLEDYQANR
KGPQNQVGAGTTTGLFGSSAATSSATGLFSSSTTNSGFAYGQNKTAFGTSTTGFGTTPGG
LFGQPNQQTSSLFNKPFGQATTTPNTGFSFGNTSTLGQQSTNTMGLFGVTQASQPGSLFG
TATNTSTGTAFGTGTGLFGQPSTGFGAVGSTLFGNNKLTTFGTSTTSAPSFGTTSGGLFG
FGTNTSGNSIFGSKPAPGALGTGLGTGFGTALGAGQASLFGNNQPKIGGPLGTGAFGAPG
FNTTTATLGFGTPQAPVALTDPNASAAQQAVLQQHLNSLTYSPFGDSPLFRNPMSDPKKK
EERLKPTNPAAQKALTTPTHYKLTPRPATRVRPKALQTAGTTKSHLFDGLDDDEPSLANG
AFMPKKSIKKLVLKNLNNSNLFSPVNRDSEDLASPSEYPENGERFSFLSKPVDENHQQDG
DDDSLVSHFYNNPIAKPIPQTPENAGNKPNNSNSVDDTIVALNMRVALRNGLEGSSEETS
FHDESLQDDREEIENHVYPSHPAGIVLTKVGYYTIPSMDDLXEITNEKGECIVSDFTIGR
KGYGSIYFEGEVNLTNLNLDDIVHIRRKEVIVYLDDDQKPPVGEGLNRKAEVTLDGVWPT
DKTSRCLIKSPDRLADINYEGRLEAVSRKQGAQFKEYRPETGSWVFKVSHFSKYGLQDSD
EEEEQRPSKTSTKKLKTGTAPLSPPGQAAPLQMALNGKPALPPQTQSPEVEQLGRVVELD
SDMVDITQEPVLDSMLEDSMPEDQEPVSASTHIASSLGINPHVLQIMKASLLADEEDVDI
MDQHFSHLPSKGDTSQEICSPRLPISAIHSSKSRSLVGGLLQSKFTSGAFLSPSASVQEC
RTPRASSLMNIPSTSPWSVPPPLATVFTVPSPAPEVQLKTVGTRRHPGLVPLEKSVTYGK
GNLLMDMALFMGRSFRVGWGPNWTLANSGERLSDSLELENHQIADCMEYGFLPNPMAVKS
LTESPFKVHLEKLNLRQRKLDEDLQLFQTPLELKLKHSTVNVDEMCPFITPNVGVAVIHD
YVHWVKEVSRDLLEAQIVKPWSLTWTLCEALWGHLKDLDSQPGEPSAYTQILERRRAFSH
WLSNSTTALIEEEVSTRKDNPIEAVFSYLTGNRISAACSLAQQSGDHRLALLLSQLVGSH
SLQNLLSMQLADWHHLQADCFIQKERLRVYALLAGKPVWQISKQMQINVCAQLDWKRSLA
VHLWYLLPPTASISRALSKYEEAFQDTSDGDKYACPPLPSYLEGSGCVLQKENDSEIPLR
DVCFHLLKLYSNRKYGLDQLLEPRSITADPLDYRLSWHLWEVLRTLNYNHLEKQSEGVLH
ASYAAQLESEGLWEWAIFVFLHIDNSSIREKAVRELLTRHCQLLETPESWAKETFLTQKL
CVPAEWIHEAKAVRAHMESDPHLEALYLFKAGHWNHCHKLVIRHLASDAIINENYDYLKG
FLEDLAPPERSSLIQDWETSGLVYLDYIQIIEILRRIQQEECSSYELEQLNTKVTSLCSR
IEQIQCYSAKDRLAQSDMAKRVANLLRVVLSLRHTSDVTSDATPDPQRVPLRLLAPHIGR
LPMPEDYALEEMSSLTQSYLRELTVGSQ
NT seq
5307 nt
NT seq
+upstream
nt +downstream
nt
atgttcaataaatcatttggagccccttttgggggtggcacaagtggctttggaacaact
tcatcttttggacagaatactggctttggcaccactactggaggtgcatttggaacatct
gcctttggttctagcaccaatactggaggcctgtttggaaattcacagaccaaaccagga
ggattatttggtaataattcatttagccagccagctacctccacaagcactggcttcggg
tttggtacatcaacaggaacgtcaaatagcttgtttggaactgcaagcacagggaccggt
cttttctcatcccaaaacaatgcctttgcacaaaataaaccaagtggctttgggagtaat
ttcacagcagcacttactgggactactataaaatttaatccgccaactggtacagatact
atggtcaaagctggagttagcactaacatcagcaccaagcaccagtgtattactgccatg
aaagaatatgaaagcaagtcactagaggaacttcgtttagaggactaccaggctaaccgg
aaaggcccacagaaccaggtgggagcaggtacaacgactggcttgtttgggtcttctgca
gccacctccagtgcgacgggactcttcagctcttccaccactaattcaggctttgcttat
ggtcagaacaaaactgcctttggaactagtacaactggatttggaacaactccaggtggt
ctctttggccaaccaaatcagcaaacttccagcctcttcaataaaccgtttggacaggct
acaaccaccccaaacactggcttttcttttggtaacaccagcacccttggacagcaaagt
actaacaccatgggtttatttggagttactcaagcctcacaaccaggaagtctttttggg
acagctacaaacaccagcacaggaacagcatttggaacaggaacaggtctctttggacag
cccagtactgggtttggtgcagttggttcgaccctgtttggcaataacaagcttactacg
tttggaaccagcacaaccagtgcgccctcgtttggtacaaccagtggcgggctctttggt
tttggcacaaataccagtgggaatagtatttttggaagtaaaccagcacctggggctctg
ggaacagggcttggcacaggatttggaacagctcttggtgctggacaggcatctttgttt
gggaacaaccaacctaagatcggagggcctcttggtacaggagcctttggggcccctgga
tttaatactacgacagccactttgggctttggcaccccccaggccccagtagctttgact
gatccaaatgcttctgctgcccagcaggctgttctccaacagcatctcaatagtctgaca
tattcgccttttggagactctcctctctttcggaaccccatgtcagaccctaagaagaaa
gaagagagattgaaaccaacaaatccagcagctcagaaggctcttactacacctacccat
tataaattgacaccccgtcctgccaccagagtccggcccaaggctttacaaacagcaggc
acaaccaaatcacatctctttgatgggctcgatgatgatgaaccatccctagccaatgga
gcattcatgcccaagaagagcattaagaagctggttttgaagaaccttaacaatagcaat
ctgttttctcctgttaatcgtgattcagaagatctggcgtcaccatctgaatatccagaa
aatggagaaagatttagtttcctgagcaaacctgtggatgagaaccatcagcaggatgga
gatgatgattctcttgtgtcacatttttataataaccctattgctaaacccattcctcaa
actccagagaatgctggaaataaaccaaataacagcaacagtgtggatgataccattgtt
gctttaaatatgcgtgttgctttgcgaaatgggctggaaggaagcagtgaagaaacctct
tttcatgatgagtcactgcaggatgacagagaagaaatagaaaatcatgtttacccttcg
catccagcaggcattgttctcactaaggttggttactacactattccatctatggatgat
cttngggaaattaccaatgagaaaggagagtgcattgtttctgacttcaccattggtcgt
aaaggttatggctcaatctattttgaaggagaggtgaatttgacaaatctcaatttggat
gacattgtacatatccgaaggaaagaagttattgtttacttagatgatgaccaaaagcca
cctgtgggtgaaggtctaaatagaaaggctgaagttacattggatggagtgtggccaaca
gataaaacatctcgttgtttaataaagagcccagatcgacttgctgatatcaactatgag
gggagattggaagcagtttcaaggaaacagggagctcagttcaaagagtaccggcctgaa
acaggctcttgggtatttaaggtctcccatttttctaaatatggccttcaggattctgat
gaagaggaggaacaacgtccatccaaaactagtacaaagaagttgaagactgggactgcc
cctttgtctcctccaggccaggctgcccctttacagatggctcttaatggcaaacctgca
cttccacctcagacccagagtccagaggtggagcagttagggagggttgtggaactggac
agtgacatggtagatatcacccaggagccagttttggattccatgttagaagacagcatg
cctgaggatcaggaacctgtgtctgcctcaacccacattgcatcttcactgggaattaat
ccacatgtcttacagatcatgaaagcatcattgcttgctgatgaagaagatgtagatata
atggatcaacactttagtcatcttccttccaaaggagatacttctcaagaaatctgttct
ccaagactccccatttcagcaatccactcatcaaaatcccgttcactagttggtgggtta
ctacaatcaaaatttacaagcggagcttttctttcaccaagtgcctctgtgcaagaatgc
cgaactcccagagcatcatcattaatgaatataccatccacatcaccttggtctgtccct
ccaccactggccactgtgtttacagtgcctagcccagcccctgaggttcagttgaaaaca
gtgggcacacgaaggcatccaggtttagtccctcttgaaaagtctgtcacgtatggcaag
ggaaatctcttgatggatatggccctgttcatgggacgctcatttcgggttggttggggc
cctaactggactcttgctaatagtggagaacggcttagtgactctcttgaactggaaaat
catcagattgctgattgtatggaatatggattcctacccaatccaatggctgttaaatcc
ctaactgagtccccattcaaagttcacctggaaaaactcaatttaagacaaaggaagctg
gatgaagatctgcagttatttcagacacctttggagctgaaattaaaacatagcactgtc
aatgttgatgaaatgtgtcctttcatcacccccaatgtgggagttgctgtcattcatgac
tatgtacactgggtaaaggaagtatccagagatttattagaagcacagattgtgaagcct
tggagcttgacatggacattatgtgaagccctgtggggccacctgaaagatcttgacagc
caaccgggtgagcccagtgcatacactcagattctggagcgaaggagagctttctcccac
tggctatccaatagtactacagctctaattgaagaggaagtctcgacccgaaaagacaat
cccatagaggctgtcttcagctacctcacaggcaataggatcagtgcagcctgctctctg
gcacagcagtcaggtgatcatcgtcttgccctccttttatctcagttggtggggagccat
tcgctccagaatcttctttccatgcagcttgcagattggcatcatctgcaggctgactgc
ttcatccagaaggagagattgcgtgtctatgccctgctggctggaaaaccggtatggcag
atctcaaagcagatgcaaattaatgtgtgcgcccagctagattggaagcgctcccttgct
gtccatctttggtatttacttccaccaacggcttccatttccagggcactcagcaagtat
gaagaagcatttcaggatacctctgacggtgacaaatatgcctgtcctccactgccttca
tacctggagggttctggctgtgtgctgcagaaagagaacgactcagagatcccacttagg
gatgtctgttttcaccttctcaaactctacagtaacagaaaatatggtcttgatcagctt
ctggaacctcgaagtataactgcagaccctttggactatcgtctaagctggcacctttgg
gaggtgctgcggacccttaactataaccacctcgaaaagcagagtgagggtgtgcttcac
gccagttacgctgcccagctggaaagcgaagggctctgggagtgggccatctttgtcttc
ttgcacattgataactccagcatccgtgagaaggctgttcgagagctgctaactcggcac
tgccagctcttggagaccccggaatcttgggctaaggagactttccttacccagaagctg
tgtgtgcctgctgagtggattcacgaggccaaagcagtgcgtgcgcacatggaatctgat
ccacacttggaagccctatacctgtttaaagctggtcactggaaccactgccacaaactt
gtcatccgacacttagcttccgatgccatcattaatgaaaactatgactacctaaagggg
ttcttggaagacctggcacctccagagcgcagcagcctaattcaggactgggaaacatct
gggcttgtttacctagactatattcaaatcattgaaatactccgccgtattcagcaggag
gaatgttcaagttacgaactagagcagttaaacaccaaagtgacgtctctgtgcagccgg
atagagcagatccagtgttacagcgccaaggatcgcctggctcagtcagatatggccaaa
cgcgtagccaacttgttgcgggtggtactgagcctaaggcatacctctgatgtaacttca
gatgccacaccagaccctcagcgagtccctttgcgcctgctggccccccacattggccga
ctccccatgcctgaggactatgccttggaggaaatgagcagcctcacacagtcttacctt
cgagaactgactgttgggagccagtga
DBGET
integrated database retrieval system
