Cavia porcellus (domestic guinea pig): 100716329
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Entry
100716329 CDS
T07777
Name
(RefSeq) TATA box-binding protein-associated factor RNA polymerase I subunit B-like isoform X1
KO
K15213
TATA box-binding protein-associated factor RNA polymerase I subunit B
Organism
cpoc
Cavia porcellus (domestic guinea pig)
Brite
KEGG Orthology (KO) [BR:
cpoc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cpoc03021
]
100716329
Transcription machinery [BR:
cpoc03021
]
Eukaryotic type
RNA polymerase I system
Basal transcription factors
SL1/TIF-1B
100716329
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rrn7_cyclin_C
Zn_ribbon_RRN7
Rrn7_cyclin_N
Motif
Other DBs
NCBI-GeneID:
100716329
NCBI-ProteinID:
XP_013001013
Ensembl:
ENSCPOG00000010780
LinkDB
All DBs
Position
Unknown
AA seq
589 aa
AA seq
DB search
MELEDAKELKERCAQCAAVSWGLTDEGKYYCTSCHNVTERSKEVTNTDVIPNTKIKSISR
GLKRRSKLEKGWDWYVCEGFQHILCQQAEALKALGVTPELKDEVLHNFWKRYLQKSKQAY
CANPVYSRRKTEMLEGNVCHSDGVSGPELLSDINWTSGLDSGAESQSDAPGPKPFAALRT
PHSEAASVCSGSLDGVEYSERKEKSVVKMTVPRTLALCYLSLLWQREAVTLSDLLRFVED
EEDHIPYIKAFQNFPEEMKLYGRDKGIFAIESWPDYEEIYKHTVEIATFLDLPRFPDITK
DCFLHPNILCVKYLMEANLPDEMHGLIRQVTEMTGWGEVDSLTFDPIAKAATTVKYDVLA
VALIVVVLKLLFLLDDSVEWSLSDLAEVNNEKNKTGKPWFSFRKWYHVMKRTLEEQRRKW
EDARAKYMWKSEKPLYHSHIDKPVAYKRREVVVNLQKQFSTLLDPAPTVTKKSAASFQLS
WAEGDPGRPCFHSHSLGGVLLKKGQALVTKNSLYWLSTQKFCRSYCKHVTTYEESNFSLS
YQFLLNLFAFLLRVKAALLHDEVSLIEKKLFKKKYNEAKKNPRSRKGRR
NT seq
1770 nt
NT seq
+upstream
nt +downstream
nt
atggagctggaggacgcgaaagagttaaaagaacgctgcgctcagtgtgctgctgtctct
tggggtctcactgatgaaggcaaatattactgtacttcctgccacaatgttacagaaaga
tctaaggaagttaccaacactgatgttattcctaacaccaagataaaatccatcagcagg
ggcctcaaaaggagaagcaagttggagaaaggctgggattggtacgtgtgcgaaggcttt
cagcatatactgtgtcaacaagcagaagccctgaaggccctcggagtgaccccagaatta
aaggatgaagtgttacacaatttttggaagcgttacctgcagaagagtaagcaggcatat
tgtgcaaacccagtctacagcagaaggaagactgagatgttggaaggaaacgtctgtcat
tcagatggggtgagtgggcccgagctgctcagcgacataaactggacatctggcctcgac
agtggagcagagtcacaatccgacgccccagggccaaagccctttgctgccctgagaaca
ccgcactcagaagcagcctctgtctgttccgggtccctggatggcgtggagtactcggag
cggaaggagaaaagtgtcgtgaagatgacggtacccaggacactcgccctctgctacttg
tccttactgtggcagagagaagcagtgactctctcagatctgctgagatttgtcgaagac
gaagaggatcatattccttacataaaggcttttcagaatttcccagaagagatgaaattg
tatggacgtgacaaaggaatctttgctatagagtcttggccggactatgaggaaatctat
aaacacactgttgaaatcgccacgttcttagatttgccccgttttccggacatcactaag
gactgcttcctgcaccccaacatcctgtgtgtgaaatacctgatggaagccaacctccct
gatgaaatgcacggattaatccgccaggtgacagagatgaccggctggggagaggtggac
tccctgacctttgaccccatcgcgaaagctgccacaactgtgaagtatgacgtgctggct
gtggctctcatcgtggtggtcttaaagctgctcttcctactggacgacagcgtagagtgg
tctttgtctgatctcgctgaagtcaacaatgaaaagaataaaacagggaagccatggttc
agtttcaggaagtggtaccacgtcatgaagaggacactggaggagcagaggcggaagtgg
gaggacgcacgcgccaagtacatgtggaagagcgaaaagccactctaccactcccacatt
gacaagcccgtggcctacaagaggagggaagtggtggttaatctgcagaagcagttcagc
accctgctggatccagccccaaccgtgacgaagaaaagcgctgcgagtttccagctcagc
tgggccgaaggcgaccccggccggccctgtttccacagccacagtcttgggggtgtcctg
ctaaaaaaaggccaggcactggtgaccaagaactccttatactggctgagcacccagaaa
ttctgcagaagctactgcaaacacgtgaccacctacgaagagtccaatttctccctgagc
tatcagtttctactaaacctcttcgccttcctgctgcgagtaaaggctgccctcctccac
gacgaagtgagcctaattgaaaaaaagctttttaaaaagaaatacaatgaagccaaaaag
aacccaagatccaggaaaggaagaagatag
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