Cavia porcellus (domestic guinea pig): 100716434 Help Entry 100716434         CDS       T07777                                  Symbol Cdc40 Name (RefSeq) pre-mRNA-processing factor 17   KO K12816   pre-mRNA-processing factor 17 Organism cpoc  Cavia porcellus (domestic guinea pig) Pathway cpoc03040   Spliceosome Brite KEGG Orthology (KO) [BR:cpoc00001]  09120 Genetic Information Processing   09121 Transcription    03040 Spliceosome     100716434 (Cdc40)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03041 Spliceosome [BR:cpoc03041]     100716434 (Cdc40) Spliceosome [BR:cpoc03041]  Complex C   Other components    Step II factors     100716434 (Cdc40) BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  WD40 WD40_Prp19 WDR55 EIF3I WD40_WDHD1_1st WD40_CDC20-Fz Beta-prop_EML_2 Beta-prop_TEP1_2nd Beta-prop_WDR90_POC16_2nd Beta-prop_EML WD40_MABP1-WDR62_2nd Beta-prop_CAF1B_HIR1 Beta-prop_WDR75_1st Beta-prop_EIPR1 Beta-prop_TEP1_C WD40_RFWD3 Beta-prop_RIG_2nd ANAPC4_WD40 Beta-prop_DCAF4 Beta-prop_SPT8 WD40_MABP1-WDR62_1st Beta-prop_IFT122_1st WDR90_beta-prop_4th Beta-prop_SCAP Beta-prop_NWD2_C WD_LRWD1 WDR54 Beta-prop_Vps41 Motif Other DBs NCBI-GeneID:  100716434 NCBI-ProteinID:  XP_003466094 Ensembl:  ENSCPOG00000010967 UniProt:  H0VI47 LinkDB All DBs Position Unknown AA seq 579 aa AA seqDB search MSAAIAALAASYGSGSGSESDSDSEGSRCPLPAADSLMHLTKSPSSKPSLAVAVDSAPEV AVKEDLETGVHLDPAVKEVQYNPTYETMFAPEFGPENPFRTQQMAAPRNMLSGYAEPAHI NDFMFEQQRRTFVTYGYALDPSLDNHQVSAKYIGSVEEAEKNQGLTVFETGQKKTEKRKK FKENDASNIDGFLGPWAKYVDEKDVAKPSEEEQKELDEITAKRQKKGKQEEEKPGEEKTI LHVKEMYDYQGRSYLHIPQDVGVNLRSSVPPEKCYLPKKQIHVWSGHTKGVSAVRLFPLS GHLLLSCSMDCKIKLWEVYGDRRCLRTFIGHSKAVRDICFNTAGTQFLSAAYDRYLKLWD TETGQCISRFTNRKVPYCVKFNPDEDKQNLFVAGMSDKKIVQWDIRSGEIVQEYDRHLGA VNTIVFVDENRRFVSTSDDKSLRVWEWDIPVDFKYIAEPSMHSMPAVTLSPNGKWLACQS MDNQILIFGAQNRFRLNKKKIFKGHMVAGYACQVDFSPDMSYVISGDGNGKLNIWDWKTT KLYSRFKAHDKVCIGAVWHPHETSKVITCGWDGVIKLWD NT seq 1740 nt NT seq  +upstreamnt  +downstreamnt atgtcggctgcaattgcggctctggccgcttcctatggatcaggttcagggtccgaatcg gactcggacagtgagggcagtcgatgtccgctgccagctgccgactccctcatgcatctg actaagtcgccttcgagcaagccttctctggcagtggcggtggactctgccccggaggtg gcagttaaggaagacttggagactggcgttcaccttgaccctgctgtcaaggaagttcag tataatcctacctatgagactatgtttgctcccgagtttggaccagaaaatccctttaga acacagcaaatggctgctcctagaaatatgctttctggatatgccgaaccagctcatatc aatgatttcatgtttgaacagcaaagaagaacttttgtcacatacggctatgcattggat ccgtcgttagataatcatcaagtgtctgctaaatacattggttctgtagaagaagctgaa aaaaatcaaggtttaactgtatttgaaactggtcagaagaaaacagaaaaaaggaaaaag ttcaaagaaaatgatgcatctaatattgatggtttcttggggccatgggcaaaatatgtg gatgaaaaggatgtagccaaaccttcagaggaagaacaaaaagaattggatgaaatcaca gcaaagaggcagaaaaaaggcaaacaagaagaagagaagcctggggaggagaagacaatc ttacatgttaaagaaatgtatgactatcaaggcaggtcctatctccacatacctcaagat gttggtgttaatctacggtcttctgtaccacctgaaaaatgttatcttcccaaaaaacaa attcatgtgtggtctggacacacaaagggtgtcagcgcagtaagattgtttcccctctct ggccatttattgctgtcttgttccatggactgtaaaattaagctatgggaggtttatgga gaccggcgctgtctacgaacgtttattggtcacagtaaagctgttagggacatctgcttc aacactgcaggaacccagtttctcagcgcagcctatgacaggtatctgaagctctgggac actgagacaggacagtgtatatcaagattcacaaaccgaaaagtaccctattgtgtcaaa tttaatcctgatgaagataaacaaaatctctttgtggctgggatgtctgataaaaagatt gtgcagtgggacattcgaagtggagaaattgttcaggagtatgatcgacatttgggagct gtcaacaccattgtttttgttgatgagaacagaagatttgtgagtacgtctgatgataag agcctgagagtttgggaatgggatatccctgtggatttcaagtacatagctgaacctagt atgcactcgatgcctgcagtcactttgtctccaaacggtaaatggctagcatgccaatca atggataaccaaatcttaatatttggagcacagaacagattcagactgaacaagaaaaaa atttttaaaggccacatggtagcaggctatgcttgtcaagtggacttttcaccagacatg agctatgtgatttcaggagatggaaatggaaaattaaacatttgggactggaagaccacc aaactctacagtcgatttaaagctcatgataaagtatgcataggtgcagtgtggcacccg catgagacatctaaggtcatcacctgtggctgggatggtgtcattaaactgtgggattaa

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