Cavia porcellus (domestic guinea pig): 100716734
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Entry
100716734 CDS
T07777
Name
(RefSeq) nuclear RNA export factor 2 isoform X1
KO
K14284
nuclear RNA export factor
Organism
cpoc
Cavia porcellus (domestic guinea pig)
Pathway
cpoc03008
Ribosome biogenesis in eukaryotes
cpoc03013
Nucleocytoplasmic transport
cpoc03015
mRNA surveillance pathway
cpoc05014
Amyotrophic lateral sclerosis
cpoc05164
Influenza A
cpoc05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
cpoc00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
100716734
03015 mRNA surveillance pathway
100716734
03008 Ribosome biogenesis in eukaryotes
100716734
09160 Human Diseases
09172 Infectious disease: viral
05164 Influenza A
100716734
05168 Herpes simplex virus 1 infection
100716734
09164 Neurodegenerative disease
05014 Amyotrophic lateral sclerosis
100716734
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cpoc03019
]
100716734
03009 Ribosome biogenesis [BR:
cpoc03009
]
100716734
Messenger RNA biogenesis [BR:
cpoc03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
100716734
mRNA cycle factors
Stress granule specific factors
100716734
Ribosome biogenesis [BR:
cpoc03009
]
Eukaryotic type
Pre-60S particles
Export and cytoplasmic maturation factors
100716734
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LRR_NXF1-5
NXF_NTF2
Tap-RNA_bind
LRR_4
NTF2
LRR_8
TAP_C
Motif
Other DBs
NCBI-GeneID:
100716734
NCBI-ProteinID:
XP_013009202
Ensembl:
ENSCPOG00000003136
UniProt:
H0V060
LinkDB
All DBs
Position
Unknown
AA seq
603 aa
AA seq
DB search
MCSQRKEFGTFRNKGPQAKDWAEMQQFRYGDGTSALRRRRGNGRASYGNFDRRSTRHEHS
RHGLLSSHFPKDDSNAIKDFYEDRRVRYIPYVRQHHRSRGRGCDVHKSRVNVCRDPQLRD
REMKMDTRDGTRQSWFKVTIPLGRTYDKTWLMNLIQCHCSVSFSPVDFHYIENRALFFVQ
GVSTASAIKDASNKIYDEENQKIRIFVNPSAVPYSVQNKFTPEQMKQLKLTMKKRYDVSQ
KALNLQKLRFDPDLMDHEIDIILNRRSCMVAALKIIERNFPELLSLNLQNNKLYKLDGLS
DIVEKGPQVKILNLSENELKSIRELDKVKGLKLEELWLQGNPFCSKYADQSAYVSAIQDF
FPKLLRLDGQELRPPTVNDIDLRKLVESCKESYKGSETLKNLILQFLQEYYLIYDYGERQ
GLLSAYHNEACFSLTIPLNAMDLDTSNLCEYFKYSRNLKTLKEPDLRRQLLKYTKRDIVD
CLCVLPKTRHDCDTFVVDMWLQTEKMLCFSVNGVFKEIQGTSQGCVHAFTRTFIATPGSS
TRLCIVNDHLFVRDARPDEIQSAFSIPVATPCSSSTSTLSQEHQRMAHAFSIQSGMKLQW
AQK
NT seq
1812 nt
NT seq
+upstream
nt +downstream
nt
atgtgttcacagagaaaggagtttgggacattcagaaataaagggccacaagccaaggac
tgggctgagatgcagcagttcagatatggtgatggcaccagtgctcttcgaagaagaagg
ggaaatgggagggcttcctatggtaattttgacagaaggagcactcgtcatgaacatagt
cggcatgggcttctgtcttcacacttcccgaaggatgattcaaatgcgataaaggatttt
tatgaggatcgcagagtgagatacattccttacgtcagacaacaccacaggagcagaggg
agagggtgtgatgtgcacaaaagccgtgttaatgtgtgcagagatccacagctgagagac
agagaaatgaagatggacacacgggatggaacccggcagagctggttcaaggtcacaatt
ccacttggcagaacatacgacaagacctggctaatgaatttaatccagtgccattgcagt
gtctccttcagcccggttgatttccactacatcgaaaatagggccctgttcttcgtccag
ggtgtgagcaccgcctccgcaataaaagatgccagcaacaagatttatgatgaggagaac
caaaagatacgtatctttgtcaatccttctgctgtaccctactctgtgcagaataagttc
acaccagaacaaatgaagcagctaaagctgaccatgaagaaacgctatgatgtctcccag
aaggctctcaatcttcagaagctccgctttgacccagacttgatggaccatgagattgac
ataatcctgaatcgaagaagttgcatggttgccgccctgaagatcattgaaagaaatttc
cctgagctgttgtccttgaacttgcaaaacaacaaattatacaaactggatggcctgtcg
gacatcgtggagaagggcccgcaagtgaagattctgaacctttccgaaaatgaactgaag
tcaatcagggagttagacaaggtgaaaggcctgaagcttgaagagttgtggctacaaggg
aaccccttttgcagcaagtacgcggaccaatctgcttatgtgagtgccatccaggatttt
ttccccaagttgttacgcctggatggccaggagttacgcccaccaactgtcaatgacatt
gatctgcgcaagttagtagaatcctgcaaggaaagctacaaaggatctgagaccttgaag
aatctgattctacagttcctgcaggagtattacttgatctatgactatggagagcgacag
ggtctcctcagtgcttaccacaatgaagcctgcttctccctgaccattcccctcaacgct
atggacctagacacgagcaacttgtgtgagtatttcaagtatagcaggaatttgaagacg
ctcaaagaaccagacttgcggagacagctgctgaagtacacgaagcgagacattgtagat
tgcctctgtgtgttgcccaaaactcggcatgactgcgatacctttgtggtggacatgtgg
ctccagacggaaaagatgctttgcttttctgtgaatggagtgttcaaggaaatacaggga
acgtctcagggttgtgttcatgccttcacccggacattcatcgctactcctggcagcagc
acccgtctatgcattgtgaatgaccacctgtttgtgagggatgccaggcctgatgagatc
cagagtgccttctccatacccgtggccacaccttgctccagctccacgtccaccttgtcc
caggagcatcagagaatggcgcacgctttctccatacagtctggaatgaaactccagtgg
gctcagaagtga
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integrated database retrieval system
