Cavia porcellus (domestic guinea pig): 100716949
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Entry
100716949 CDS
T07777
Name
(RefSeq) LOW QUALITY PROTEIN: protocadherin beta-5
KO
K16494
protocadherin beta
Organism
cpoc
Cavia porcellus (domestic guinea pig)
Brite
KEGG Orthology (KO) [BR:
cpoc00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
cpoc04515
]
100716949
Cell adhesion molecules [BR:
cpoc04515
]
Cadherins
Protocadherins
100716949
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_C_2
Cadherin_CELSR2_9th
Motif
Other DBs
NCBI-GeneID:
100716949
NCBI-ProteinID:
XP_005008448
LinkDB
All DBs
Position
Unknown
AA seq
796 aa
AA seq
DB search
METAPAKTLHKRQVAFLVMLLFVWEAGSEAIRYSMPEETESGYLVANLAEDVGLRVGELA
TRGARIHYRGTRQLLQLDVQTGNLLLCEKLDREGLCGATEPCVVHFQLLLENPVQFFQVE
LQLTDINDHSPEFLERETLLKIPESAQPGTVFPLKIAQDFDIGSNTVQNYTVSPNSHFHV
VTHNRGDGRRYPELVLDKALDREDQPELSLILTAVDGGDPPRSGTTTVRIEVVDINDNAP
EFSQSLYEAQVPENSALSSVVVTVSARDLDAGIHGSVVYTLLHGDEVTQPFVIDEMTGEI
RLKRTLDFEENQYYSLEIVATDSGGFSGKCSVSIEVLDVNDNAPELTMSTLSTSVPENAP
ETVVAIFSVSDPDSGDNGRMVCSIQNDVPFFLKPSFKNFYTLVTEGPLDRESRAEYNITI
TVTDLGTPRLKTQHTITVLVSDVNDNAPTFTQSSYTLSVPENNSPALHIGSVSATDSDSG
TNAQLTYSLLPPPHDPLPGLASLVSINADTGQLFALRALDYEALRAFEFRVRATDRGAPP
LSGQARVRVPVLDANDNAPFVLHPLQKASAPCTELLPRAAQAGYLLTKVVAVDADAGQNA
WLSFQLLQASEPGLFSVWAHSGEVRTARPPGERDAPRQRLLVLVRDNGQPPLSASVTLHV
LLVDGFSQPHLPGPEAAAERAQADPLTGPLVVALASVSSLFLCWLLLFVALRLCGRSGRA
ALPGCPAPEGPFPGQLLDVSGAGTLAHSYQYEVCLTGDSGTDEFKFLRPFFPSLPPQSAG
EETEGNIGVRNSFGFQ
NT seq
2391 nt
NT seq
+upstream
nt +downstream
nt
atggagactgccccagcaaaaacgctgcacaaaaggcaagttgcttttcttgttatgctg
ttgtttgtgtgggaggctggctctgaggcgattaggtattcgatgccagaagagacagaa
agtggctacctggtggccaacctggcagaagatgtggggctcagggtgggggagctggcc
actcgaggcgcgcgaatccattacagaggaaccaggcagctcttgcagcttgatgtacag
actggcaatttgcttctgtgtgaaaagctagaccgggaggggctgtgcggggcgacagaa
ccctgtgtggtgcatttccaactgttactggaaaaccccgtgcagttttttcaagtcgaa
ctgcaactcacagacataaacgaccattctccagagttcttagagagagaaaccctcctt
aaaatcccagagagtgcccagccagggaccgtgtttcctctgaaaatagcccaggacttt
gacatagggagcaacactgttcagaactacacggtcagccccaactcccattttcatgtg
gtgactcacaaccgcggggatggcaggagatatccagagctggtgctggataaagctctg
gacagggaggatcagcccgagcttagtttaatcctcacagctgtggatggtggggacccg
cccaggtcggggaccacgacagtacgcattgaagtcgtggacatcaatgataacgcccct
gaattttcacagtcgctctatgaggcacaggttcctgagaacagtgcgctcagttctgtt
gttgtcactgtgtctgcccgagatttagatgcaggaatacacgggagtgtagtctatact
ttacttcatggcgacgaagttacccagccctttgtaatagatgaaatgacaggagaaatt
cgtctgaaacgcacattggattttgaggaaaatcagtactatagcctggaaattgtagcc
acggacagtggaggcttctcggggaaatgctccgtctctatagaggtgttggatgtgaat
gacaacgcccctgaactgaccatgtccacgctcagcacatctgttccagaaaacgcccca
gaaactgtggttgccattttcagtgtgtctgatccagattctggagacaatggtaggatg
gtttgctccatccaaaacgatgtacccttctttttgaagccttctttcaagaacttttac
accctggtgacagaaggaccactggacagagaaagtcgagccgagtacaacatcaccatc
accgtcaccgacctggggacgcccaggctgaaaacccagcacaccatcaccgtgctggtc
tccgacgtcaacgacaacgcccccaccttcacccaaagctcctacaccctctcggtgccc
gagaacaacagccccgccctgcacatcggcagcgtcagcgccacagactcagactcgggc
accaacgcccagctcacctactcgctgctgccgccgccccacgacccgctcccgggcctc
gcctcgctcgtgtccatcaacgccgacaccggccagctgttcgcgctgcgggcgctggac
tacgaggccctgcgcgccttcgagttccgcgtgcgcgccaccgaccgcggcgcgcccccg
ctcagcggccaggcgcgcgtgcgcgtgccggtgctggacgccaacgacaacgcgcccttc
gtgctgcacccgctgcagaaagcgtccgcgccctgcaccgagctgctgccccgcgccgcc
caggccggttacctgctcaccaaggtggtggcggtggacgccgacgcgggccagaacgcc
tggctgtccttccagctgctgcaggccagcgagcccgggctgttcagcgtgtgggcgcac
agcggcgaggtgcgcaccgccaggccgccgggcgagcgcgacgcgcccaggcagcggctg
ctcgtgctggtcagggacaacggccagccgccgctgtcggccagcgtcacgctgcacgtg
ctgctggtggacggcttctcgcagccccacctgcccgggcccgaggcggcggccgagcgc
gcgcaggccgacccgctcaccggccccctggtggtggcgctggcctcggtgtcgtcgctc
ttcctgtgctggctgctgctcttcgtggcgctgaggctgtgcgggaggagcgggcgggcc
gcgctgcctggctgccctgcgcccgagggcccctttccgggccagctgctggacgtcagc
ggggcgggcacgctggcccacagctaccagtatgaggtgtgtctcacgggagactctggc
acagatgagttcaaattcttgagaccatttttccccagcctcccaccccagagtgctggg
gaagaaacagaaggaaacattggtgtccgcaacagttttgggttccagtag
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