KEGG   Cavia porcellus (domestic guinea pig): 100716969
Entry
100716969         CDS       T07777                                 
Symbol
Sec13
Name
(RefSeq) protein SEC13 homolog isoform X1
  KO
K14004  protein transport protein SEC13
Organism
cpoc  Cavia porcellus (domestic guinea pig)
Pathway
cpoc03013  Nucleocytoplasmic transport
cpoc04141  Protein processing in endoplasmic reticulum
cpoc04150  mTOR signaling pathway
cpoc05014  Amyotrophic lateral sclerosis
Brite
KEGG Orthology (KO) [BR:cpoc00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    100716969 (Sec13)
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    100716969 (Sec13)
 09130 Environmental Information Processing
  09132 Signal transduction
   04150 mTOR signaling pathway
    100716969 (Sec13)
 09160 Human Diseases
  09164 Neurodegenerative disease
   05014 Amyotrophic lateral sclerosis
    100716969 (Sec13)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:cpoc03019]
    100716969 (Sec13)
   04131 Membrane trafficking [BR:cpoc04131]
    100716969 (Sec13)
Messenger RNA biogenesis [BR:cpoc03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Nuclear pore complex
     100716969 (Sec13)
Membrane trafficking [BR:cpoc04131]
 Protein recycling
  Rab GTPases and associated proteins
   Rab11 associated proteins
    100716969 (Sec13)
 Endoplasmic reticulum (ER) - Golgi transport
  Forward pathways
   Coat protein complex II (COP-II)
    100716969 (Sec13)
 Autophagy
  Other autophagy associated proteins
   SEACAT/GATOR2 complex
    100716969 (Sec13)
SSDB
Motif
Pfam: Beta-prop_THOC3 Beta-prop_IFT122_1st Beta-prop_WDR5 WD40 Beta-prop_WDR3_1st WD40_Prp19 WD40_CDC20-Fz WD40_WDHD1_1st Beta-prop_EML_2 Beta-prop_CAF1B_HIR1 Beta-prop_WDR3_2nd Beta-prop_EIPR1 WD40_MABP1-WDR62_2nd WDR55 WD40_Gbeta Beta-prop_RIG_2nd Beta-prop_WDR90_POC16_2nd ANAPC4_WD40 EIF3I Beta-prop_WDR75_1st Beta-prop_WDR41 Beta-prop_NOL10_N Beta-prop_Vps41 Beta-prop_EML NBCH_WD40 PAC11
Other DBs
NCBI-GeneID: 100716969
NCBI-ProteinID: XP_003464126
Ensembl: ENSCPOG00000015707
UniProt: H0VTZ4
LinkDB
Position
Unknown
AA seq 322 aa
MVSVINTVDTSHEDMIHDAQMDYYGTRLATCSSDRSVKIFDVRNGGQILIADLRGHEGPV
WQVAWAHPMYGSILASCSYDRKVIIWKEENGTWEKTHEHSGHDSSVNSVCWAPHDYGLIL
ACGSSDGAISLLTYTGEGQWEVKKINNAHTIGCNAVSWAPAVVPGSLIDQPSGQKPNYIK
KFASGGCDNLIKLWKEDEDGQWKEDQKLEGHSDWVRDVAWAPSIGLPTSTIASCSQDGRV
FIWTCEDTSGNMWSPKLLHKFNDVVWHVSWSITANILAVSGGDNKVTLWKESLDGQWVCI
SDVNKGQGSVSASATESQQNEQ
NT seq 969 nt   +upstreamnt  +downstreamnt
atggtgtctgtaattaacaccgtggacacctcccatgaggacatgattcacgatgcccag
atggattactatggcactcgcctggccacctgctcctcagacaggtccgtcaaaatcttc
gatgtgcgcaatggagggcagatcctcattgctgacctcaggggtcatgagggtcctgtg
tggcaggtggcctgggcccaccccatgtatggcagtatcctggcatcgtgttcctatgac
cggaaagtcatcatctggaaagaggagaatggcacctgggagaagacccatgagcactca
gggcatgactcctcagtaaactctgtgtgctgggccccccatgactatggcctgatcctg
gcctgtgggagctcggatggggccatctccctgcttacctacacgggtgaaggccagtgg
gaagtgaagaagatcaacaatgctcacactatcggctgcaacgccgttagctgggcccct
gctgttgtacccggaagcctcatagaccagccatcagggcagaaacccaactacatcaag
aagtttgcttctggcggctgtgacaacctcatcaaactatggaaggaggatgaggatggc
cagtggaaggaggaccagaagctggagggacacagtgactgggttcgagatgtagcctgg
gccccctccatcggcctgcccaccagcaccatcgccagctgctcccaggatggccgagtg
ttcatctggacctgtgaggatacctcaggcaacatgtggtcacctaagttgttgcacaag
ttcaacgatgtggtatggcatgtgagctggtccatcactgccaacatcctcgccgtctca
ggcggagacaacaaggtgaccctatggaaggagtcacttgacggccagtgggtgtgcatc
agtgacgtcaacaagggccagggctccgtgtcagcttccgccaccgagagccagcagaac
gagcagtga

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