Cavia porcellus (domestic guinea pig): 100717120
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Entry
100717120 CDS
T07777
Symbol
Pdzrn4
Name
(RefSeq) PDZ domain-containing RING finger protein 4
KO
K15682
ligand of Numb protein X 3/4 [EC:
2.3.2.27
]
Organism
cpoc
Cavia porcellus (domestic guinea pig)
Brite
KEGG Orthology (KO) [BR:
cpoc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cpoc04121
]
100717120 (Pdzrn4)
Enzymes [BR:
cpoc01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
100717120 (Pdzrn4)
Ubiquitin system [BR:
cpoc04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Ligand of Numb proteins
100717120 (Pdzrn4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PDZ
PDZ_6
PDZ_2
PDZ_Tricorn
Motif
Other DBs
NCBI-GeneID:
100717120
NCBI-ProteinID:
XP_023423423
Ensembl:
ENSCPOG00000000372
LinkDB
All DBs
Position
Unknown
AA seq
777 aa
AA seq
DB search
MGCNLCTFQKREEHYKLLYEVSQVNGKDLSKATHEEAVEAFRNAKEPIVVQVLRRTPLSR
ASYGTVPDVQLRNASTQTDITFEHIMALAKLRPPTPPVPDVCPFLLSDSCHALHPEEHEF
YEDNEYLSSLPADADRTEDFEYEEIELCRVSSQEKLGLTVCYRTDDEDDAGIYVSEVDPN
SIAAKDGRIREGDRILQINGEDVQNREEAVALLASDECKRIVLLVARPEIQLDEGWLEDE
RNEFLEELNLEMLEKQHNEATRRTADEVEQPKKQEEEEGTTDTATSSSNNHEKDSGVGRT
DESLRNEESSEQENAAEDPSGTSLKSKRELGHSQDTLGSVELQCNESFVSGEYIDSDCVG
NHDEECERFRQLLELKCKIRSRGEYDLYYASSTIECNQGEQEGVEHELQLLNEELRNIEL
ECQNIMQAHRLQKVTDQYEDIWALHDRGFRNYNTSLDMQRGKLDDIMEHPEKSDKDSSSA
YNTAESCRSTPLTVDRSPDSSLPRMINLTNKKNLRSTMATHQSSGQSSKESTSTRAKATE
QGCSTESQEQLLETSKFANPEKTVCEPVPYLSPYHSSSYRCANIPAHARHYQSYMQLIQQ
KSAVEYAQSQLSLVSMCKDPQKVSEPKMEWKVKIRSDGTRYITKRPVRDRILKERALKIK
EERSGMTTDDDTMSEMKMGRYWSKEERKQHLVRAKEQRRRREFMLRSRLECLREAPQSGS
EARKELSILELSHKKMMKRRNKKILDNWMTIQELMTHGAKSPDGTRVHSAFLSVTTV
NT seq
2334 nt
NT seq
+upstream
nt +downstream
nt
atgggctgcaatttgtgcacttttcagaaaagagaggaacactacaaactgctatatgaa
gtttcccaggtcaatgggaaggatctctcaaaagctacccatgaagaggcagtggaagct
tttcgaaatgccaaggagcccattgtggtgcaagtgttaaggcggacgccgctcagcaga
gcctcctatgggacggtcccggacgtgcagctcaggaacgccagcacgcagacagacatc
acctttgagcacatcatggccctggccaagctcaggccacctacccctcccgtgccagac
gtctgtccatttctactgtcagacagctgccatgctcttcatccggaggagcatgaattt
tatgaggacaatgagtacctttccagcctgccggcagatgcagacagaacagaagacttt
gaatatgaggagatcgagttgtgtcgtgttagcagtcaagagaagctgggcctcacagtc
tgctaccggacggatgacgaagacgatgcaggcatttatgtcagcgaagtggatccaaac
agcatcgcagccaaagatggccgaattcgagaaggtgatcgaattttgcaaataaatggg
gaagacgtccagaatcgagaagaggcagtggcgttgctggcgagcgacgagtgtaagaga
atcgtgctgcttgttgcaagaccagagattcagctggatgaaggctggctggaagatgaa
aggaatgaattcttagaggagttaaacttggaaatgttggaaaagcagcataatgaagca
acgcggcgcactgctgatgaggtggagcagccaaaaaagcaagaggaagaagaaggtaca
acagataccgcgacatcctcctccaacaaccatgaaaaagacagcggggtagggcgcaca
gacgaaagcttgcgaaacgaggagagctcagagcaggagaacgcagccgaggaccccagc
ggcacatctttgaagagcaagcgagagctgggacacagccaggataccctgggaagcgtt
gagcttcagtgcaatgagagcttcgtgtctggtgagtacattgactcggactgcgtcggc
aaccacgacgaggagtgtgaacggttccggcagctcttagagctcaagtgcaaaatccgc
agccgtggagagtatgacctgtattacgccagcagcacgattgaatgcaaccaaggggag
caggagggcgtagagcatgagctacagctgctaaatgaagagctgagaaacattgagctg
gaatgccagaatatcatgcaggctcacaggctccagaaagtgacagaccaatatgaggac
atctgggctttgcatgatagaggattccgaaattataacaccagcctagacatgcagagg
ggtaaattagacgacattatggaacatccagagaagtcagacaaggacagttctagcgct
tacaacacagcggaaagctgcagaagtaccccactcactgtggaccgttccccggatagt
tccctgccccgaatgatcaacctcaccaataagaaaaacctgcgaagcaccatggccacc
catcagtcctccggacagagtagcaaagagtcaacatccacccgagccaaggccacggaa
caggggtgcagcacggaaagccaggagcagcttttggaaaccagcaagtttgccaacccg
gagaagacagtctgtgagccagtcccttacctctcgccctaccacagctcgtcctacagg
tgcgccaacatcccagcccacgccaggcattaccagagctacatgcagttaattcagcag
aagtcggccgtggagtatgcccagagccagctcagtttggtgagcatgtgcaaggaccct
cagaaggtgtccgagcccaagatggagtggaaggtgaaaatcaggagcgatgggacccgc
tacatcaccaagaggccggtgcgagaccggattctgaaggaacgtgccttaaagatcaag
gaggagcgcagcggcatgaccacggatgacgacaccatgagcgagatgaagatggggcgc
tactggagcaaagaggagcgcaagcagcacctggtgcgcgccaaggagcagcgccggcgg
cgcgagttcatgctgcgcagccggctggagtgtctgcgggaggcgccgcagagcggcagc
gaggcccgcaaggagctcagcatcctggagctgagccacaagaagatgatgaaaaggagg
aacaagaagatcctggacaactggatgacaatccaagaactgatgacccacggggccaag
tctccggatggcacgagggtgcacagtgccttcctgtccgtcaccacggtatga
DBGET
integrated database retrieval system
