Cavia porcellus (domestic guinea pig): 100717330
Help
Entry
100717330 CDS
T07777
Symbol
Chd1
Name
(RefSeq) LOW QUALITY PROTEIN: chromodomain-helicase-DNA-binding protein 1
KO
K11367
chromodomain-helicase-DNA-binding protein 1 [EC:5.6.2.-]
Organism
cpoc
Cavia porcellus (domestic guinea pig)
Brite
KEGG Orthology (KO) [BR:
cpoc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cpoc03021
]
100717330 (Chd1)
03036 Chromosome and associated proteins [BR:
cpoc03036
]
100717330 (Chd1)
Transcription machinery [BR:
cpoc03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
SAGA/TFTC/STAGA complex
100717330 (Chd1)
Chromosome and associated proteins [BR:
cpoc03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
SAGA complex
100717330 (Chd1)
SLIK complex
100717330 (Chd1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
HTH_CHD1_Hrp3
CDH1_2_SANT_HL1
CHD1-like_C
Helicase_C
Chromo
HDA2-3
ResIII
Motif
Other DBs
NCBI-GeneID:
100717330
NCBI-ProteinID:
XP_012998694
Ensembl:
ENSCPOG00000003318
LinkDB
All DBs
Position
Unknown
AA seq
1709 aa
AA seq
DB search
MNGHSDEESVRNSSGESSQLDDDSGSASHSGSGSSTGSSSDGSSGQSGSSDSESASDSGS
QSESESDASRGNKVQAKPPKVDGAEFWKSSPSILAVQRSAMLKKQQQQQQQQQQQQQQQQ
HLASSNSGSEEDSSSSDDSDDSGDIKRKKHKDEDWQMSGSGSPSQSGSDSESEEERDKSS
CDETESDYEPKNKVKSRKPQNRSKSKNGKKILGQKKRQIDSSEEDEDEEDYDNDKRSSRR
QATVNVSYKEDEEMKTDSDDLLEVCGEDVPQPEEEEFETIERFMDCRIGRKGATGATTTI
YAVEADGDPNAGFEKNKESGEIQYLIKWKGWSHIHNTWETEETLKQQNVRGMKKLDNYKK
KDQETKRWLKNASPEDVEYYNCQQELTDDLHKQYQIVERIIGYSFHQKSAAGYPDYYCNX
AGMPYSECSWEDGGLISKKFQACIDEYFSRNQSKTTPFKDCKVLKQRPRFVALKKQPSYI
GGHEGLELRDYQLNGLNWLAHSWCKGNSCILADEMGLGKTIQTISFLNYLFHEHQLYGPF
LLVVPLSTLTSWQREIQTWASQMNAVVYLGDINSRNMIRTHDGCIPDNDKIIYSDTYEIA
FLGGLNWAFIGVDEAHRLKNDDSLLYKTLIDFKSNHRLLITGTPLQNSLKELWSLLHFIM
PEKFSSWEDFEEEHGKGREYGYASLHKELEPFLLRRVKKDVEKSLPAKVEQILRMEMSAL
QKQYYKWILTRNYKALSKGSKGSTSGFLNIMMELKKCCNHCYLIKPPDNNEFYNKQEALQ
HLIRSSGKLILLDKLLIRLRERGNRVLIFSQMVRMLDILAEYLKYRQFPFQRLDGSIKGE
LRKQALDHFNAEGSEDFCFLLSTRAGGLGINLASADTVVIFDSDWNPQNDLQAQARAHRI
GQKKQVNIYRLVTKGSVEEDILERAKKKMVLDHLVIQRMDTTGKTVLHTGSAPSSSTPFN
KEELSAILKFGAEELFKEPEGEEQEPQEMDIDEILKRAETHENEPGPLTVGDELLSQFKV
GFFSNMDEDDIELEXERNSKNWEEIIPEIRETIRERKQRNLRKFICVPRMRNCAKQISFN
GSEGRRSRSRRYSGSDSDSVSEGKRPKKRGRPRTIPRENIKGFSDAEIRRFIKSYKKFGG
PLERLDAIARDAELVDKSETDLRRLGELVHNGCIKALKDSSSGTERTGSRLGKVKGPTFR
ISGVQVNAKLVISHEEELIPLHRSIPSDPEERKQYTIPCYTKPAHFDIDWGKEDDSNLLI
GIYEYGYGSWEMIKMDPDLSLTHKILPDDPDKKPQAKQLQTRADYLIKLLSRDLAKKEAL
RLSGAGGLKRRKGRVKKNKAVKSIKVKEEIKSDSSPLPSEKSDEDDEKLSESKSESKERS
KKSLMLDAPVHITASGETVPISEESEELDQKTFSICKERMRPVKAALKQLDRPEKGLSER
EQLEHTRQCLIKIGDHITECLKEYANPEQIKQWRKNLWIFVSKFTEFDARKLHKLYKHAI
KKRQETQQNSDQNSNLNAHVIRNPDVERLKENTNHDDSSRDSYSSDRHLSQYHDHHKDRH
QGDSYKKSDSRKRPYSSFSNGKDHREWDHYKQDSRYYSDREKHRKLDDHRSRDHRSNLEA
SLKDRCHSDHRSHSDHRVHSDHRSSSEYTHHKSSRDYRYHSEWQMDHRASSSGPRSPLDQ
RSPYGSRSPFEHSVEHKSTPEHTWSNRKT
NT seq
5130 nt
NT seq
+upstream
nt +downstream
nt
atgaatggacacagtgatgaagaaagtgttagaaacagtagtggagaatcaagccagttg
gatgatgattctgggtcagcttcgcactctggatctggttcgagtactgggagcagcagt
gatggaagcagcggccagtcaggcagcagtgactctgagtctgcatctgactcaggcagc
cagtcggagtcggagtcggacgcatcccgcggaaacaaagttcaggcaaaaccaccaaaa
gtggatggagctgagttttggaagtctagccctagtattctggctgttcagagatctgca
atgctcaagaagcagcagcagcagcagcagcaacagcagcagcagcagcagcagcagcaa
catctggcttcatctaatagtggatctgaagaggattcatctagcagtgatgattctgat
gactcgggtgacatcaaaaggaaaaaacataaagatgaagattggcaaatgtctggatcg
ggatctccatctcagtctggttcagattcagaatctgaagaagagagagataaaagcagt
tgtgatgaaacagaatcagattatgagccaaaaaacaaagtaaaaagcaggaaacctcaa
aacagatctaagtcaaaaaatgggaaaaagatacttggacaaaaaaagagacaaattgat
tcatctgaggaagatgaggatgaggaagactatgataatgataaaagaagttctcgtcgc
caggcaactgtcaatgtgagctataaggaagatgaagaaatgaaaacagattctgatgac
ctgctagaagtctgtggagaggatgttcctcaacctgaggaagaagaatttgaaacaata
gaaaggtttatggattgtcgtattgggagaaaaggagctactggtgctactaccaccatc
tatgctgttgaagcagatggtgatccaaatgcaggatttgaaaaaaacaaggagtcagga
gagatccagtatttaattaaatggaaaggatggtctcatatccacaacacttgggagaca
gaagaaacacttaaacagcagaatgttagaggaatgaaaaaattagataattacaagaaa
aaagatcaagaaacaaaaagatggttgaaaaatgcttccccagaagatgtggagtattat
aattgccagcaagaacttacagatgatctacataaacagtatcaaatagtggaacgtata
attggttactcattccaccagaagtcagcggcaggttaccctgactattattgcaatnng
gcagggatgccttactcagaatgcagctgggaagatggaggtcttatttctaaaaaattt
caggcatgcattgatgagtatttcagcaggaaccaatcaaaaactactcctttcaaagat
tgcaaagtattaaaacaaagaccaagatttgtagccctgaagaagcaaccatcctatatt
ggaggacatgagggtttagaattgagagattaccaactcaatggtttaaattggcttgct
cactcttggtgcaaaggaaatagttgcatacttgctgatgaaatgggccttggaaaaaca
atacagacgatctcatttttaaattatttgtttcatgaacatcaattatacggacctttt
ctattagtagtacctctctccactctcacttcctggcaaagggagattcagacgtgggct
tctcagatgaatgctgtggtttatttaggtgacattaacagcagaaacatgataagaact
catgatggatgcatcccagacaacgataaaattatatactctgacacctatgaaattgct
ttccttggtggtttgaattgggcattcataggtgtggatgaagcacatcgcttaaaaaat
gatgattctcttctgtacaaaacattaatagattttaaatccaatcaccgcctccttatt
actggaactcctttacaaaactccctcaaagagctctggtcactgctccatttcattatg
ccagaaaagttttcttcctgggaagattttgaagaagaacatggcaaagggagagaatat
ggttatgcaagcctccacaaagagcttgagccgtttctgttacgccgagttaaaaaagat
gtggaaaaatctcttcctgccaaggttgaacagattttaagaatggaaatgagtgcttta
cagaaacaatattacaagtggattttaactagaaattacaaagccctcagcaaaggttcc
aagggcagtacctcaggctttttgaacattatgatggagctaaagaaatgttgtaaccat
tgctacctcattaaaccaccagataataatgaattctacaataaacaggaggccttacaa
cacttaatccgtagtagtggaaaattaattctccttgacaagctgttaattcgcctaaga
gaaagaggcaaccgagttctcattttttctcaaatggtgcggatgttagatatacttgca
gaatatttgaaatatcgtcaatttccctttcaaagattagatggatcaataaaaggggag
ctgaggaaacaagctctagatcattttaatgctgagggatcagaggatttttgctttcta
ctttctacaagagctggaggtttaggcattaatttagcctctgctgacacagttgttatt
tttgattctgattggaatccacaaaatgatcttcaggcacaggcaagagcgcatcgaatt
ggacaaaagaaacaggtgaacatatatcgtctagttacaaagggatcagttgaagaagat
attcttgaaagggccaaaaagaagatggttttagatcatcttgtgattcagagaatggac
acaactgggaagacagtactgcacacaggttctgctccgtcaagttccactcctttcaat
aaggaagaattatcagctattttaaagtttggtgctgaggagctttttaaggaacctgaa
ggagaagaacaagaaccccaggaaatggatatagatgaaatcttgaagagggctgaaact
catgaaaatgaaccaggccctttaactgtaggagatgaattgctttcccagttcaaggta
ggtttcttttccaatatggatgaggatgatattgaattggaanctgaaagaaattcaaag
aattgggaagaaatcattccagagatcagagagacgattagagagagaaagcaaaggaac
ttgaggaaatttatatgcgtcccaagaatgagaaactgtgcaaaacagattagtttcaat
ggaagtgaagggaggcgcagtagaagtaggagatactctgggtctgatagtgattcagtc
tcagaagggaaaaggccaaagaaacgtggaaggccacgcaccatccctcgggagaatatt
aaaggatttagtgatgcagaaattaggcggtttatcaagagctataagaaatttggtggc
cctttggaaagattagatgcaattgctcgagatgctgaattagttgataagtcagaaaca
gacctcagacgactaggagaactggtacataatggttgcattaaagctttaaaggatagt
tcttcaggaacagaacgaacaggtagtagactaggaaaagtgaaggggccaacattccga
atatcaggagtacaagtaaatgccaaactagtcatttcccatgaagaagaattaatacct
ttgcacagatccattccttcagacccagaagaaagaaagcagtatacaatcccatgctac
acaaagccagctcatttcgatatagactggggcaaagaagatgattccaacttactaatt
ggtatttatgaatacggatatggaagctgggaaatgattaaaatggatcctgacctcagt
ctaactcacaagattcttccagatgatcctgataaaaagccacaagcaaaacagttgcag
acacgtgcagactacctcatcaagttacttagtagagatcttgcaaaaaaagaagctctg
agactttctggtgcaggcggtttaaagagaagaaaaggaagagttaagaagaacaaagca
gtgaaatctataaaagtgaaagaagaaataaagagtgattcttctcccctgccttcagag
aagtctgatgaagacgatgagaagttgagtgaatccaagtctgagagtaaagaaagatct
aaaaaatctttgatgttagatgctccagttcatattactgcaagtggtgaaacagttccc
atatctgaagaatctgaagagctggatcagaagacattcagcatttgtaaagaaagaatg
aggcctgtcaaggcagctttgaaacaacttgataggcccgagaaaggcctttcagaaaga
gaacaactggagcatactagacagtgtttaatcaaaattggagaccatatcacagaatgt
ctgaaagagtatgcaaatcctgaacagattaagcaatggagaaaaaacctgtggattttt
gtatctaagtttactgaatttgatgcaagaaagttacataagttatataagcatgctatc
aaaaaacgacaagaaactcagcaaaacagtgatcagaacagcaacttgaatgctcatgta
attagaaatccagatgtggaaagattaaaagagaatacaaatcatgatgacagcagcagg
gacagttattcttctgatagacatttatctcagtaccatgaccatcataaagaccgacat
cagggagattcctacaaaaagagcgattccagaaaaagaccctattcttcatttagtaat
ggtaaagaccatcgggaatgggatcactacaagcaagacagcagatattacagtgaccga
gagaaacacagaaaactggatgatcacaggagtagagatcacaggtcaaatttggaagca
agtttaaaagatagatgtcattctgatcatcgatctcattcagatcatcgggtccattca
gatcaccggtcaagttctgaatatacacaccataaatcttccagggattatagatatcac
tcagagtggcaaatggaccacagagcttccagtagtggccctaggtcaccactagatcag
aggtctccatatggctccagatcgccatttgaacattcagtagaacacaaaagtacacct
gagcatacctggagtaatcggaaaacataa
DBGET
integrated database retrieval system
