Cavia porcellus (domestic guinea pig): 100717449
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Entry
100717449 CDS
T07777
Symbol
Smarcd2
Name
(RefSeq) LOW QUALITY PROTEIN: SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 2
KO
K11650
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D
Organism
cpoc
Cavia porcellus (domestic guinea pig)
Pathway
cpoc03082
ATP-dependent chromatin remodeling
cpoc04714
Thermogenesis
cpoc05225
Hepatocellular carcinoma
Brite
KEGG Orthology (KO) [BR:
cpoc00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
100717449 (Smarcd2)
09150 Organismal Systems
09159 Environmental adaptation
04714 Thermogenesis
100717449 (Smarcd2)
09160 Human Diseases
09162 Cancer: specific types
05225 Hepatocellular carcinoma
100717449 (Smarcd2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cpoc03021
]
100717449 (Smarcd2)
03036 Chromosome and associated proteins [BR:
cpoc03036
]
100717449 (Smarcd2)
Transcription machinery [BR:
cpoc03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
100717449 (Smarcd2)
Chromosome and associated proteins [BR:
cpoc03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
100717449 (Smarcd2)
PBAF complex
100717449 (Smarcd2)
GBAF(ncBAF) complex
100717449 (Smarcd2)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SWIFT
SWIB
Motif
Other DBs
NCBI-GeneID:
100717449
NCBI-ProteinID:
XP_023419155
Ensembl:
ENSCPOG00000011371
LinkDB
All DBs
Position
Unknown
AA seq
533 aa
AA seq
DB search
MSGRGAGGSPLPPLSPGSGAVAAALGSAAYPRRDPGMLPGPALRGPGPAGGVGAPWGCRL
PPHGPRGSPRLQYQRPGMSPGNRMPMAGLQVGPPTGSPFGTAVPLRPGMPPTMMDPFRKR
LLVPQAQPPMPAQRRGLKRRKMADKVLPQRIRELVPESQAYMDLLAFERKLDQTIARKRM
EIQEAIKKPLTQKRKLRIYISNTFSPSKAEGDSVGTAGTSGGTPAGDKVASWELRVEGKL
LDDPSKQKRKFSSFFKSLVIELDKELYGPDNHLVEWHRMPTTQETDGFQVKRPGDLNVKC
TLLLMLDHQPPQYKLDPRLARLLGVHTQTRAAIMQALWLYIKHNQLQDGHEREYINCNRY
FRQIFSCGRLRFSEIPMKLAGLLQHPDPIVINHVISVDPNDQKKTACYDIDVEVDDPLKA
QMSNFLASTTNQQEIASLDVKIHETIESINQLKTQRDFMLSFSTDPQDFIQEWLRSQRRD
LKIITDVIGNPEEERRAAFYHQPWAQEAVGRHIFAKVQQRRQELEQVLGIRLT
NT seq
1602 nt
NT seq
+upstream
nt +downstream
nt
atgtcgggccgtggcgcgggcgggtccccgctgcccccgttgagccctggcagcggcgcc
gttgccgcggccctgggaagcgccgcctaccccaggcgggacccgggaatgctgcctggt
ccagcgcttcggggcccgggacctgctggaggcgtgggggccccttggggctgccgcctt
ccgccccatgggccccgcgggtccccgcggcttcagtaccagcggccaggcatgtcacca
gggaaccggatgcccatggctggcttgcaggtgggaccccctactggctccccatttggc
acagctgttccactaagacctggcatgccacccaccatgatggatccattccgaaaacgc
ctgcttgtgccccaggcccagccaccaatgcctgcccagcgccgggggctaaaaaggagg
aagatggcagataaggttctacctcagcgaattcgggaacttgtcccagagtctcaggca
tacatggatctcttggcatttgagaggaagctggaccagaccattgctcgcaagcggatg
gaaatccaggaggccatcaaaaagcctctgacgcaaaagcgaaagcttcgaatctacatt
tccaatacgttcagtcccagcaaggcagaaggtgatagtgtgggaactgcagggacctct
ggaggaactccagcaggagacaaggtggcttcctgggaactccgtgtggagggcaaactg
ctggatgatcctagcaaacagaagagaaagttttcttcattcttcaagagccttgtcatt
gagctggacaaagaactgtatgggcctgacaatcacctggtagagtggcatcggatgccc
accactcaggagacagatggcttccaggtgaaacggccaggagacctcaatgtcaagtgc
acactcctgctcatgctggatcatcagcctcctcagtataaactggatccccgactagcg
aggttactgggagtgcacacacagacaagggctgccatcatgcaagccctgtggctttac
atcaaacacaaccagctgcaggatggacatgagcgcgagtacatcaattgcaaccgttac
tttcgccagatctttagttgtggacggctccgtttctctgagattcctatgaaactggct
ggactgctacagcatccagaccccattgtcatcaaccatgttatcagtgtggaccctaat
gaccagaagaagacagcctgttatgacattgatgtggaggtagatgacccactgaaggct
cagatgagcaattttctagcctctaccaccaatcagcaggagattgcctctcttgacgtc
aagatccatgagaccattgaatccatcaaccagctgaagactcagagagatttcatgctt
agctttagcactgacccccaggatttcatccaggaatggctccgttcccagcgcagagac
ctcaagatcatcactgatgtgattggaaatcccgaggaggagagacgagctgctttctac
catcagccctgggcccaggaagcagtggggaggcatatctttgccaaggtgcaacagcga
agacaagaactggaacaggtgctgggaattcgcctgacctaa
DBGET
integrated database retrieval system
