Cavia porcellus (domestic guinea pig): 100717540
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Entry
100717540 CDS
T07777
Symbol
Trim28
Name
(RefSeq) transcription intermediary factor 1-beta
KO
K08882
tripartite motif-containing protein 28 [EC:
2.3.2.27
]
Organism
cpoc
Cavia porcellus (domestic guinea pig)
Brite
KEGG Orthology (KO) [BR:
cpoc00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
cpoc01001
]
100717540 (Trim28)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cpoc04121
]
100717540 (Trim28)
Enzymes [BR:
cpoc01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
100717540 (Trim28)
Protein kinases [BR:
cpoc01001
]
Serine/threonine kinases: Other
TIF1 family [OT]
100717540 (Trim28)
Ubiquitin system [BR:
cpoc04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
100717540 (Trim28)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-B_box
ANCHR-like_BBOX
PHD
zf-RING_5
zf-B_box_Trim66
zf-C3HC4
PHD_2
zf-RING_UBOX
PHD-1st_NSD
Prok-RING_1
TPR_INTS8_3
Carbpep_Y_N
YqxI
Motif
Other DBs
NCBI-GeneID:
100717540
NCBI-ProteinID:
XP_003467239
Ensembl:
ENSCPOG00000005745
UniProt:
H0V673
LinkDB
All DBs
Position
Unknown
AA seq
829 aa
AA seq
DB search
MAASAAAASAAAASASPGPAEGSAGGEKSAGAAAAAASASASASSPSGSGDEALELLEHC
GLCRERLLPEREPRLLPCLHSACSSCLGPTAPAAANNAGDGPAASDNTMVDCPVCKQQCS
SKDIVENYFMRDSGNKAASDAQDANQCCTSCEDNAPATSYCVECSEPLCETCVEAHQRVK
YTKDHTVRSTGPAKSRDGERTVYCTVHKHEPLVLFCESCDTLTCRDCQLNAHKDHKYQFL
EDAVRNQRKVLVSMVKCLGDRHATLQKSTKEVWSSIRQVSDVQKRVQVDVKMAILQIMKE
LNKRGRVLVNDAQKVTEGQQERLERQHWALTKIQKHQEHILRFASWALKSDNNTALLLSK
KLIYFQLHRALKMIVDPVEPHGEMKFQWDLNAWTKSAEAFGKIVAERPGTNSTGPAPMAP
PRAPGPLSKQGSSSSQPMEVQEAYGFGSDNPYSSAEPHVSGMKRSRSGEGEVSGLMRKVP
RVSLERLDLDLTADSQPPVFKVFPGSTTEDYNLIVIERGGAAAAAGQPGTAPPGVPGAPP
LPGMAIVKEEETEAAIGAPPPATEVPETKPVLMALAEGPGSDGPRLASPSGSTSSGLEVV
APEATSAPAGGPGNLDDSATICRVCQKPGDLVMCNQCEFCFHLDCHLPALQDVPGEEWSC
SLCHVLPDLKEEDGSLSMDGADSAGVVAKLSTANQRKCERVLLALFCHEPCRPLHQLATD
SAFSMEQPGGTLDLTLIRARLQEKLSPPYSSPQEFAQDVGRMFKQFNKLTEDKADVQSII
GLQRFFETRMNEAFGDTKFSAVLVEPPPLSLPSAGLSSQELAGGLGDGP
NT seq
2490 nt
NT seq
+upstream
nt +downstream
nt
atggcggcctcggcggcggcggcttccgcggcagcggcttcggccagcccggggcctgct
gagggctctgctggtggcgagaagtccgcgggcgccgccgcggctgcggcatcggcgtct
gcctcggcgtcgtcgccctcagggagtggcgatgaggctctggagctgctggagcactgt
ggcctgtgccgagagcgcctgctgccggagcgcgagccgcgattgctgccctgtctgcac
tcggcctgcagttcctgtctcgggcccaccgcgcccgccgccgccaacaacgcgggggac
ggtccggcggcgagtgataacaccatggtggactgtccggtttgcaagcagcagtgttcc
tccaaagacatcgtggagaactactttatgcgcgacagtggcaataaggctgcctcggac
gcacaggacgcgaaccagtgttgcactagctgcgaggataatgccccagccaccagttat
tgtgtagagtgttctgaaccactgtgtgagacctgtgtggaggctcaccagcgtgtgaag
tacactaaggaccacactgtgcgttccactggccctgccaagtcccgtgatggtgagcgc
actgtttattgcactgtgcacaaacatgaacctctagtgctattctgtgagagctgcgat
accctcacctgtcgagactgccagctcaatgctcacaaggatcataagtaccagttcctg
gaggatgcagtgagaaaccagcgcaaggtcctagtctcaatggtgaaatgccttggggac
agacatgctacactgcaaaagagcaccaaggaagtctggagctcgatccgccaggtgtct
gatgtgcagaagcgtgtgcaggtggatgtcaagatggccatcttgcagatcatgaaggag
ctgaacaagcggggccgtgtgctggtcaatgatgcccaaaaagtgactgaagggcagcag
gagcgcctggagcgtcagcactgggccttgaccaagatccagaagcatcaggaacacatt
ctgcggtttgcttcttgggctcttaagagtgacaacaacacagcgctgctgctttctaag
aaactgatctacttccagctgcacagggccctcaagatgattgtagaccctgtagagcct
catggtgagatgaagttccagtgggacctcaacgcctggaccaagagtgctgaggctttt
ggcaagattgtggctgagcgtcctggtaccaactccacaggccctgcacctatggctccc
ccaagagccccaggacccctgagcaagcagggttctagcagtagccagcccatggaggta
caggaagcctatggctttgggtcagataacccctactccagtgcagagccccatgtgtct
ggcatgaagcggtcgcgctctggcgagggtgaggtgagtggcctcatgcgcaaggtgcca
cgtgtgagcctagaacgtctggacctggaccttacagctgacagccagccgcccgtcttc
aaggtctttccgggcagcactactgaggactataaccttattgttattgagcgtggtggt
gctgctgcagctgccggtcagcctggaactgcaccccctggagtacctggcgctccaccc
ctccctggcatggccattgtcaaggaggaagagacagaggctgccattggagcccctcct
cctgctactgaagttcctgagaccaagcctgtgctgatggctctagctgagggccctggc
tctgatggcccccgcctagcttcacctagtggaagtactagctcaggcctggaggtggta
gctcctgaggctacctcggccccagctggtggtccaggaaacctagatgacagtgccacc
atttgccgtgtctgtcagaagccaggtgacctggtcatgtgcaaccagtgcgagttttgc
ttccacctggactgccacttgcctgctctgcaggatgtaccaggggaggagtggagctgc
tcactctgtcatgtactccctgacctgaaagaggaggatggcagcctaagcatggatggt
gcagatagtgctggtgtggtagccaagctctcaacagccaaccagcggaaatgtgaacgc
gtcctcctggctctcttttgccatgagccctgccgtcccctgcaccagttggctacggac
tctgctttttccatggagcagcctggtggcaccctggacctgaccctgatccgtgctcgc
ttgcaggaaaagctgtcacccccttatagctccccccaggagtttgcccaggatgtgggt
cgcatgtttaagcagtttaacaagctaacggaggacaaggcagatgtgcagtccatcatc
ggcctgcagcgtttcttcgagacgcgcatgaatgaggccttcggtgacaccaagttctct
gctgtgctggtggaacccccgcctttgagcttgcccagtgctggtctaagttcccaggag
ttggctggtggtcttggtgatggtccctga
DBGET
integrated database retrieval system
