Cavia porcellus (domestic guinea pig): 100717776
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Entry
100717776 CDS
T07777
Name
(RefSeq) protocadherin beta-13-like
KO
K16494
protocadherin beta
Organism
cpoc
Cavia porcellus (domestic guinea pig)
Brite
KEGG Orthology (KO) [BR:
cpoc00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
cpoc04515
]
100717776
Cell adhesion molecules [BR:
cpoc04515
]
Cadherins
Protocadherins
100717776
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_C_2
Cadherin_CELSR2_9th
Motif
Other DBs
NCBI-GeneID:
100717776
NCBI-ProteinID:
XP_012996399
LinkDB
All DBs
Position
Unknown
AA seq
799 aa
AA seq
DB search
METGRKLFGTQRQVLFSFFLLGLVLVGAVELKRYSVVEEMEGNTFLTNLAKDLGLSQGDL
SRRGIRVISKGNKLRLQLHQETGELFVNEKLDREELCGHAEPCMLYFQVLLESPLEFFQA
ELQVIDINDHSPQFLDREMLLTISESSAPGTTFPLKKAQDMDVGPNNIENYVLSPNSYFQ
VLTRKGSDGGKYPELVQDKALDREEEAELRLTLIAQDGGSPPRSGTAQVHIEVVDTNDNA
PEFEQPLYRVQIPEDSPIGFLVVMVSAIDIDIGINAEISYSLFQASEDISKTFEINPMTG
EIRLMDQLDFERIQSYEVNVEAKDTGSFAGKCTVLIQVLDVNDHAPELTMSALTTSIPEN
SHEIVVAVFSVSDLDSGENGKINCFIQDEHLPFLLKSPVENFYTLLTESPLDRETTAEYN
ITITVTDLGTPRLKTQHTITVLVSDVNDNAPTFTQSSYTLSVPENNSPALHIGSVSATDS
DSGTNAQLTYSLLPPPHDPLPGLASLVSINADTGQLFALRALDYEALRAFEFRVRATDRG
APPLSGQARVRVRVLDANDNAPFVLHPLQNASAPCTELLPRAAQPGYLLTKVVAVDADAG
QNAWLSFQLLQASEPGLFSVWAHSGEVRTARPPGERDAPRQRLLVLVRDNGQPPLSASVT
LHVLLVDGFSQPHLPGPEAAAERAQADPLTGPLVVALASVSSLFLCWLLLFVALRLCGRS
GRAALPGCPAPEGPFPGQLLDVSGAGTLAHSYQYEVCLTGDSGTGEFKFLKPFSPNLPPQ
SAGEETEGNVAVRNSFGFQ
NT seq
2400 nt
NT seq
+upstream
nt +downstream
nt
atggaaaccggccggaagctctttggcacacaaaggcaagtcctgttttcctttttccta
ctgggtttagttttggtgggcgcggtggaactcaaacgctactctgtggtggaggaaatg
gagggcaacacctttttaaccaatttagcaaaggacttgggtctgagccagggggacctc
tccagaagggggattagggtcatttccaaagggaacaaactgcgcttgcagctccatcag
gagaccggggaattgttcgtaaatgagaaactggaccgagaggaactgtgtggacacgca
gagccctgtatgctgtatttccaagtgttgctggagagtcccttagagtttttccaagct
gagctacaagtaatagacataaatgaccactctcctcaattcctggacagagaaatgttg
cttacaatatcagagagcagcgctcctgggactacatttccactgaagaaagctcaggac
atggatgtaggaccaaataatatcgagaactatgttcttagtcccaactcttattttcag
gtcctcactcgcaaagggagtgacggtgggaaatatcctgaactggtgcaggacaaagct
ctggatcgagaggaggaagcagagctcaggttaaccctaatagcacaggatggtggctct
ccaccccggtctggcactgctcaggttcacatagaagtggtggacacaaatgataatgct
cctgaatttgagcagcctctctacagggtacagatccctgaggacagccccatcggcttc
ctggttgtcatggtctctgctatagatatagacataggaatcaatgcagagatttcctat
tcactcttccaggcttcagaggacatcagtaaaacttttgagatcaatcctatgacagga
gaaattcgactgatggaccaacttgactttgaaagaattcagtcctatgaagtcaatgtg
gaagctaaagacactggaagctttgctggaaaatgcactgtcctgatccaagtcctggat
gtgaacgaccatgcccctgagcttactatgtctgcgcttaccacgtccatcccagaaaac
tcacatgagatagtggttgcagttttcagtgtttcagatcttgactccggagaaaacggg
aaaataaactgcttcattcaggacgagcatctacctttcttgctgaaatctccagtagaa
aatttttacacactactaacagagagcccgctggacagagagaccacagcggagtacaac
atcaccatcaccgtcaccgacctggggacgcccaggctgaaaacccagcacaccatcacc
gtgctggtctccgacgtcaacgacaacgcccccaccttcacccaaagctcctacaccctc
tcggtgcccgagaacaacagccccgccctgcacatcggcagcgtcagcgccacagactca
gactcgggcaccaacgcccagctcacctactcgctgctgccgccgccccacgacccgctc
ccgggcctcgcctcgctcgtgtccatcaacgccgacaccggccagctgttcgcgctgcgg
gcgctggactacgaggccctgcgcgccttcgagttccgcgtgcgcgccaccgaccgcggc
gcgcccccgctcagcggccaggcgcgcgtgcgcgtgcgcgtgctggacgccaacgacaac
gcgcccttcgtgctgcacccgctgcagaacgcgtccgcgccctgcaccgagctgctgccc
cgcgccgcccagcccggatacctgctcaccaaggtggtggcggtggacgccgacgcgggc
cagaacgcctggctgtccttccagctgctgcaggccagcgagcccgggctgttcagcgtg
tgggcgcacagcggcgaggtgcgcaccgccaggccgccgggcgagcgcgacgcgcccagg
cagcggctgctcgtgctggtcagggacaacggccagccgccgctgtcggccagcgtcacg
ctgcacgtgctgctggtggacggcttctcgcagcctcacctgcccgggcccgaggcggcg
gccgagcgcgcgcaggccgacccgctcaccggccccctggtggtggcgctggcctcggtg
tcgtcgctcttcctgtgctggctgctgctcttcgtggcgctgaggctgtgcgggaggagc
gggcgggccgcgctgcctggctgccctgcgcccgagggcccctttccgggccaactgctg
gacgtcagcggggcgggcacgctggcccacagctaccagtatgaggtgtgtctcactgga
gactctgggactggtgagttcaaattcttgaagccattttcccccaacctcccaccccag
agtgctggggaagaaacagaaggaaacgttgctgtccggaacagttttggcttccagtag
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