Cavia porcellus (domestic guinea pig): 100717787
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Entry
100717787 CDS
T07777
Symbol
Ercc3
Name
(RefSeq) TFIIH basal transcription factor complex helicase XPB subunit
KO
K10843
DNA excision repair protein ERCC-3 [EC:
5.6.2.4
]
Organism
cpoc
Cavia porcellus (domestic guinea pig)
Pathway
cpoc03022
Basal transcription factors
cpoc03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
cpoc00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
100717787 (Ercc3)
09124 Replication and repair
03420 Nucleotide excision repair
100717787 (Ercc3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cpoc03021
]
100717787 (Ercc3)
03400 DNA repair and recombination proteins [BR:
cpoc03400
]
100717787 (Ercc3)
Enzymes [BR:
cpoc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
100717787 (Ercc3)
Transcription machinery [BR:
cpoc03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
100717787 (Ercc3)
DNA repair and recombination proteins [BR:
cpoc03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
100717787 (Ercc3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ERCC3_RAD25_C
Helicase_C_3
ResIII
Helicase_C
DEAD
SNF2-rel_dom
AAA_22
AAA_34
Motif
Other DBs
NCBI-GeneID:
100717787
NCBI-ProteinID:
XP_003478801
Ensembl:
ENSCPOG00000002144
UniProt:
H0UXU8
LinkDB
All DBs
Position
Unknown
AA seq
781 aa
AA seq
DB search
MGKRDRADRDKKKSKKRHYECEEEDEDDAAGNDSQEAVPSAAGKQVDESGTKVDEYGAKD
YRSQMPLKDDHSSRPLWVLLMPHLLGAFSPVYKYAQDFLVAIAEPVCRPTHVHEYKLTAY
SLYAAVSVGLQTSDITEYLRKLSKTGVPDGILQFIKLCTVSYGKVKLVLKHNRYFVESSH
PDVIQHLLQDPVIRECRLRNAEGEATELITETFTSKSAISKTAEGSSGPSASRATDPQGK
SDIPMDLFDFYEQMDKDEEEEEETQTVSFEVKQEMIEELQKRCIHLEYPLLAEYDFRNDS
VNPDINIDLKPTAVLRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTAACTVRKRC
LVLGNSAVSVEQWKAQFKMWSTIDDSQICRFTSDAKDKPIGCSIAISTYSMLGHTTKRSW
EAERVMEWLKTQEWGLMILDEVHTIPAKMFRRVLTIVQAHCKLGLTATLVREDDKIVDLN
FLIGPKLYEANWMELQNNGYIAKVQCAEVWCPMSPEFYREYVAIKTKKRILLYTMNPNKF
RACQFLIKFHERRNDKIIVFADNVFALKEYAIRLNKPYIYGPTSQGERMQILQNFKHNPK
INTIFISKVGDTSFDLPEANVLIQISSHGGSRRQEAQRLGRVLRAKKGMVAEEYNAFFYS
LVSQDTQEMAYSTKRQRFLVDQGYSFKVITKLAGMEEEELAFSTKEEQQQLLQKVLAATD
LDAEEEVVAGEFGSRSSQASRRFGTMSSMSGADDTVYMEYHSSRSKPSTKHVHPLFKRFR
K
NT seq
2346 nt
NT seq
+upstream
nt +downstream
nt
atgggcaaaagagaccgggcagaccgcgacaagaagaagtccaagaaacggcactatgag
tgtgaggaggaagatgaagatgacgccgctgggaacgactctcaggaggcggtgccttcg
gccgccgggaagcaggtggatgagtccggcaccaaagtggacgaatacggagcgaaggac
tacaggtcgcagatgcccctgaaggacgaccactcctcccggcccctctgggtgctcctg
atgccacatcttcttggagccttctctccagtttacaaatatgctcaggacttcctggtg
gcaattgcagagccagtgtgccgaccaacccatgtgcatgaatacaagctaactgcttac
tccctgtatgcagctgtcagcgttgggctgcaaaccagtgacatcactgagtacctcagg
aagctcagcaagactggagtccctgatggaattcttcagtttattaagttgtgtactgtc
agctatggaaaagtcaagctggtcctgaagcacaacaggtacttcgttgaaagctcccat
cccgatgtcatccagcacctccttcaagacccagtgatccgggagtgccgcctgaggaat
gctgagggggaagccactgaactcatcacagagactttcacgagcaaatctgctatatct
aagactgcagaaggcagtagtgggccttctgcttcccgagcgacagatccacagggcaag
tcggacatccctatggacctgtttgacttttatgagcaaatggacaaggatgaggaggag
gaagaagagacacagacggtatcctttgaagtcaagcaggaaatgattgaggaactccag
aaacgttgcatccacctagagtacccattgttggcagaatatgacttccggaatgattct
gtcaaccctgatatcaacatcgatctgaaacccacagccgtcctcaggccctatcaggag
aagagtctgcggaagatgtttgggaatgggcgtgcacgttctggtgtcattgtgcttcct
tgtggtgctgggaagtccttggttggtgtgactgctgcatgcacagtcaggaaacgctgt
ctggtgctgggcaactcagctgtgtctgtggagcagtggaaagcccagttcaagatgtgg
tccaccatcgatgacagccagatatgccgcttcacttcggatgccaaggacaagcccata
ggctgctccattgctatcagcacttattccatgctgggccacaccaccaagaggtcctgg
gaggctgaacgagtcatggagtggctcaaaacccaggagtggggccttatgatccttgac
gaggtgcataccattccagccaagatgttccgacgggtgctcaccattgtgcaggcccac
tgcaagctgggtttgactgcaacccttgtccgggaagatgacaaaattgtcgacttaaat
tttttgattgggcccaaactctatgaagccaactggatggagctgcagaacaatggctac
attgcaaaagtccagtgtgctgaggtttggtgcccaatgtcgcctgagttttatcgggag
tatgtggcgatcaaaaccaagaaacgaatcttgctatataccatgaaccccaacaagttc
cgagcttgccagtttctgatcaagtttcatgaaagaaggaatgataagattattgtcttt
gctgacaatgtgtttgccttgaaggaatatgctattcggctgaacaaaccctatatctat
gggcctacatcccagggagaaaggatgcaaattctccaaaatttcaagcacaaccccaaa
atcaacaccatcttcatatccaaggtaggtgacacatcatttgatctgccagaagcaaac
gtcctcattcagatctcctctcatggtggctccaggcgacaggaggcccagaggctaggg
cgagtgctcagagccaaaaaagggatggttgcagaggagtacaatgcctttttctactcg
ctggtgtcccaggacacacaggaaatggcttactccaccaagcgacagagattcttggtc
gatcagggttatagctttaaggtaatcacaaagcttgctggcatggaggaggaagagtta
gcattttccacaaaagaggagcagcagcagctcctacagaaagtcctggcggccactgac
ctggatgcagaggaggaggtggtggcaggagagtttggctccagatccagccaggcgtcc
cggcgctttggcaccatgagctccatgtctggggcagacgacactgtatacatggagtac
cattcgtcacggagcaaaccttccaccaagcatgtgcacccgctcttcaagcgctttagg
aagtaa
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integrated database retrieval system
