Cavia porcellus (domestic guinea pig): 100718211
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Entry
100718211 CDS
T07777
Symbol
Drosha
Name
(RefSeq) LOW QUALITY PROTEIN: ribonuclease 3
KO
K03685
ribonuclease III [EC:
3.1.26.3
]
Organism
cpoc
Cavia porcellus (domestic guinea pig)
Pathway
cpoc03008
Ribosome biogenesis in eukaryotes
cpoc05205
Proteoglycans in cancer
Brite
KEGG Orthology (KO) [BR:
cpoc00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
100718211 (Drosha)
09160 Human Diseases
09161 Cancer: overview
05205 Proteoglycans in cancer
100718211 (Drosha)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cpoc03019
]
100718211 (Drosha)
03009 Ribosome biogenesis [BR:
cpoc03009
]
100718211 (Drosha)
03036 Chromosome and associated proteins [BR:
cpoc03036
]
100718211 (Drosha)
Enzymes [BR:
cpoc01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.3 ribonuclease III
100718211 (Drosha)
Messenger RNA biogenesis [BR:
cpoc03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
100718211 (Drosha)
Ribosome biogenesis [BR:
cpoc03009
]
Eukaryotic type
90S particles
RNase
100718211 (Drosha)
Prokaryotic type
rRNA processing factors
100718211 (Drosha)
Chromosome and associated proteins [BR:
cpoc03036
]
Eukaryotic type
Gene silencing
microRNA pathway
Microprocessor complex
100718211 (Drosha)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ribonuclease_3
Ribonucleas_3_3
dsrm
RM44_endonuclase
YcaO
Motif
Other DBs
NCBI-GeneID:
100718211
NCBI-ProteinID:
XP_005003847
Ensembl:
ENSCPOG00000015051
LinkDB
All DBs
Position
Unknown
AA seq
1376 aa
AA seq
DB search
MQGNTCHRMSFHPGRGCPRGRGGHGARPSAPAFRPQNLRLLHPQQPPVQYQYEPPSAPST
NFSNSPAPNFLPPRPDFVPFPPPMPPSAQGPLPPCPIRPPFPNHQMRHPFPVPPCFPPMP
PPMPCPNNPPSXGAPPGQGTFPFMVPPPSMPHPPPPPVMPQQVNYQYPPGYSHHNFPPPN
FNSFQNNPSSFPPSANNSSSPHFRHLPPYPLPKXPSERRSPERLKHYDDHRHRDHRDHSH
GRGERHRSLDRRERGRSPDRRRPDSRYRSDYDRGRTPSRHRSYERSRERERERHRHRDSR
RSPSLEKSYKKEYKRSGRSYGLPVVPEPAGCAPELPGEISKNTDSWAPPPEIVNHRSPSR
EKKRARWEEEKDRWSDSQGSGKEKNYTSVKEKEPEETLPDKNEEEDEELLKPVWIRCTHS
ENYYSNDPMDQVGDSTVVGTSRLRDLYDKFEEELGSRQEKAKAARPPWEPPKTKLDEDLE
SSSESECESDEDSTCSSSSDSEVFDVIAEIKRKKAHPDRLHDELWYNDPGQMNDGPLCKC
SAKARRTGIRHSIYPGEEAIKPCRPMTNNAGRLFHYRITVSPPTNFLTDRPTVIEYDDHE
YIFEGFSMFAHAPLTNIPLCKVIRFNIDYTIHFIEEMMPENFCVKGLELFSLFLFRDILE
LYDWNLKGPLFEDSPPCCPRFHFMPRFVRFLPDGGKEVLSMHQILLYLLRCSKALVPEEE
IANMLQWEELEWQKYAEECKGMIVTNPGTKPSSVRIDQLDREQFNPDVITFPIIVHFGIR
PAQLSYAGDPQYQKLWKSYVKLRHLLANSPKVKQTDKQKLAQREEALQKIRQKNTMRREV
TVELSSQGFWKTGIRSDVCQHAMMLPVLTHHIRYHQCLMHLDKLIGYTFQDRCLLQLAMT
HPSHHLNFGMNPDHARNSLSNCGIRQPKYGDRKVHHMHMRKKGINTLINIMSRLGQDDPT
PSRINHNERLEFLGDAVVEFLTSVHLYYLFPSLEEGGLATYRTAIVQNQHLAMLAKKLEL
DRFMLYAHGPDLCRESDLRHAMANCFEALIGAVYLEGTLEEAKQLFGRLLFNDPDLREVW
LNYPLHPLQLQEPNTDRQLIETSPVLQKLTEFEEAIGVIFTHVRLLARAFTLRTVGFNHL
TLGHNQRMEFLGDSIMQLVATEYLFIHFPDHHEGHLTLLRSSLVNNRTQAKVAEELGMQE
YAITNDKTKRPVALRTKTLADLLESFIAALYIDKDLEYVHTFMNVCFFPRLKEFILNQDW
NDPKSQLQQCCLTLRTEGKEPDIPLYKTLQTVGPSHARTYTVAVYFKGERIGCGKGPSIQ
QAEMGAAMDALEKYNFPQMAHQKRFIERKYRQELKEMRWEREHQEREPDETEDIKK
NT seq
4131 nt
NT seq
+upstream
nt +downstream
nt
atgcaaggcaatacatgtcacagaatgtccttccacccaggacgagggtgtccccgaggg
cgaggaggacatggagccagaccctcagcaccagccttcagacctcaaaatctgcggctg
cttcaccctcagcagcctcctgtgcaatatcagtatgaacctccaagtgcgccatccacc
aacttctccaactctccagcacccaattttctgcctccgcgaccagactttgtacccttc
cctccgccgatgcctccatcagcacaaggccctctgcccccctgccccatcaggccccct
ttccccaaccaccagatgaggcacccgttcccagtgcccccctgcttcccacccatgccc
cctccgatgccttgtcctaacaaccctccgtccnctggagcacctcctggacaaggcact
ttccccttcatggtgccccctccttccatgccccaccctccgccccctccagtcatgcca
cagcaggtcaattatcagtacccaccggggtactcacaccacaatttcccacctcccaat
ttcaacagtttccagaacaatcccagttctttcccgcccagcgctaacaacagcagtagc
cctcattttaggcatctccctccttacccactgccaaagnctcccagtgagcggaggtcc
ccagaaaggctcaagcactatgatgatcacaggcaccgagatcacagagatcacagtcac
gggcgaggtgagaggcatcggtccctggatcggcgagagcgaggccgcagccccgacagg
aggagaccagacagccgctaccgctcggattatgaccgagggaggacaccgtcccgccac
cgcagctacgagcgcagcagagagcgggaacgtgagagacacaggcaccgtgacagccga
cgatcaccgtctctggaaaagtcgtacaaaaaggagtataagagatctggaaggagttat
ggtttaccagttgttcctgaacctgctggatgtgcaccagaactacctggggagattagt
aaaaatacagattcttgggccccacccccggagattgtgaatcatcgctccccaagcagg
gagaagaagagagctcgctgggaggaggaaaaagacagatggagtgatagccagggctca
ggcaaagagaagaactatacttcagtcaaggaaaaagagccagaggaaacactgccagac
aaaaatgaagaggaagatgaagaacttcttaaacctgtgtggattcgatgtacccattca
gaaaactactactccaatgaccctatggaccaggtgggagactctactgtagttggaaca
agtagactccgtgacctgtatgataaattcgaggaagagctggggagtcggcaggaaaaa
gccaaggctgcccggccaccgtgggagcctccgaagacgaaactggatgaagatttagag
agctccagcgaatctgaatgtgagtccgacgaggacagcacctgttccagtagctcagac
tcagaggtgtttgacgtgattgcagaaattaaacgcaagaaagcccaccccgaccggctt
cacgatgagctttggtacaatgacccaggccagatgaatgatggaccactctgcaaatgc
agcgcaaaagcaagacgcacaggaattcggcacagcatttatcccggagaggaggccatc
aagccctgtcgtcctatgaccaacaacgctggcagacttttccactatcggattactgtc
tcccctcctactaactttttaactgacaggccaactgtgatagagtatgatgatcacgag
tacatctttgaaggattctctatgtttgcacatgcccccctgaccaatattccactgtgt
aaggtaattagattcaacatagactacacaattcatttcattgaagagatgatgcccgag
aatttttgtgtgaaagggcttgaactcttttcactgttcttattcagagatattttggaa
ttatatgactggaatcttaaaggtcctttgtttgaagacagccctccctgctgcccaaga
tttcatttcatgccacgttttgtgagatttcttccagatggaggtaaggaagtgctgtcc
atgcaccagattcttctgtacctgttacggtgtagcaaagccctggtgccggaagaggag
attgctaatatgcttcagtgggaggagctggagtggcagaagtatgcagaagaatgcaaa
ggcatgatcgttaccaaccccggaacgaaaccaagttctgtccgcattgatcaactggat
cgtgagcagttcaatcccgacgtgattacttttccaattattgtccattttgggatacgc
cctgcacagttgagttatgcaggagacccacagtaccagaaactatggaagagttacgtg
aaactccgccacctccttgcaaacagtcccaaagttaaacaaactgacaaacagaagctg
gcacagagggaggaagcactccaaaagatacgacagaagaatacaatgaggcgagaggta
accgtggagctcagtagccaaggattctggaaaactggcattcgttctgatgtctgtcag
catgcaatgatgctgcctgttttgacccatcatatacgctaccaccagtgcctaatgcac
ctggacaagttgataggatatacttttcaagatcgttgcctgttacagctggccatgact
catccgagtcatcatttaaattttggaatgaatcctgatcatgccaggaattctttatct
aactgtggaattcggcagcccaaatacggagacagaaaagttcatcacatgcatatgcgg
aaaaaaggaattaatactttaattaatattatgtcacgccttggccaagatgacccaaca
ccttccaggattaatcacaatgaacggttggagtttctaggtgatgctgttgtggagttc
ctgaccagtgtccacttgtactatttgtttcctagcctggaagaaggaggattggcaacg
tatcggactgcgatagtccagaatcagcaccttgccatgctagcaaagaaacttgaactg
gatcgattcatgctgtatgctcatggccctgacctttgtagagaatcagacctccgacat
gcaatggctaattgttttgaagcattgataggagctgtttacttggagggaaccttggag
gaggccaagcagttatttggacgcttactctttaatgatccggacctgcgcgaagtctgg
ctcaattatcctctccacccactccaactacaagagccaaatactgatcgacaacttatt
gaaacttctccagttctacagaaacttactgagtttgaagaagcaattggagtaattttt
actcacgttcgacttctggcaagggcattcacattgagaactgtgggatttaaccatctg
accctaggccacaatcagaggatggaatttctaggtgattccataatgcaactggtggct
acagagtacctgttcattcatttcccagatcatcatgaaggacacttaactttgttgcga
agctctttagtgaataacagaactcaagccaaggtggcagaggagctgggcatgcaggag
tacgccataactaacgacaaaaccaagaggcccgtggccctgaggaccaagacgctggca
gacctcttggaatcatttattgcagcgctgtacattgataaggatttggaatatgttcat
actttcatgaatgtctgtttctttccacgactaaaagagttcattttgaatcaggattgg
aatgaccccaaatcccagctgcagcaatgttgtttgacacttaggacagaaggaaaagag
ccagacattcccctgtacaagactctgcagacggtggggccatcccacgctagaacctac
accgtggctgtgtatttcaagggagaaagaataggttgtgggaaaggaccaagtattcag
caagcggaaatgggagcggcaatggatgcacttgaaaaatataactttccccagatggcc
catcagaagcggttcattgaacggaaatacagacaagagttaaaagaaatgaggtgggaa
agagagcatcaagagagagagccagatgagactgaagacataaagaagtaa
DBGET
integrated database retrieval system
