Cavia porcellus (domestic guinea pig): 100718466
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Entry
100718466 CDS
T07777
Symbol
Shank1
Name
(RefSeq) LOW QUALITY PROTEIN: SH3 and multiple ankyrin repeat domains protein 1
KO
K15009
SH3 and multiple ankyrin repeat domains protein
Organism
cpoc
Cavia porcellus (domestic guinea pig)
Pathway
cpoc04724
Glutamatergic synapse
Brite
KEGG Orthology (KO) [BR:
cpoc00001
]
09150 Organismal Systems
09156 Nervous system
04724 Glutamatergic synapse
100718466 (Shank1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ank_2
Ank
Ank_4
SAM_1
Ank_5
SH3_2
SAM_2
PDZ_6
PDZ
SH3_1
SH3_9
FERM_f0
SAM_PNT
Motif
Other DBs
NCBI-GeneID:
100718466
NCBI-ProteinID:
XP_003465455
Ensembl:
ENSCPOG00000025493
LinkDB
All DBs
Position
Unknown
AA seq
1797 aa
AA seq
DB search
MTHSPATSEDEERHSVSECPEGGSESDSSPDGPGQGLRGTRGRGSGAPGNLASVRGLQGR
SMSVPDDAHFSMMVFRIGIPDLHQTKCLRFNPDATIWTAKQQVLCALSESLQDVLNYGLF
QPATSGRDANFLEEERLLREYPQSFEKGVPYLEFRYKTRVYKQTNLDEKQLAKLHTKTGL
KKFLEYVQLGTSDKVARLLDKGLDPNYHDSDSGETPLTLAAQTEGSVEVIRTLCLGGAHI
DFRARDGMTALHKAACARHCLALTALLDLGGSPNYKDRRGLTPLFHTAMVGGDPRCCELL
LYNRAQLGISDENGWQEIHQACQRGHSQHLEHLLFYGAEPGAQNASGNTALHICALYNKE
TCARILLYRGANKDVKNNSGQTPFQVAVIAGNFELGELIRNHREQDVVPFQESPKYAARR
RGPPGAGLTVPPALLRANSDTSMALPDWMVFSAPGTSSSAAPGPTSGPQGQSQPSAPTTK
LSSGTLRSASSPRGARARSPSRGRHPEEAKRQPRGRPSSSGTPRDGPTGGTGGSGGPGGS
LGSRGRRRKLYSAVPGRSFMAVKSYQAQGEGEISLSKGEKIKVLSIGEGGFWEGQVKGRV
GWFPSDCLEEVANRSQEGKQESRSDKAKRLFRHYTVGSYDSFDAPSLMDGIGPGSDYIIK
EKTVLLQKKDSEGFGFVLRGAKAQTPIEEFTPTPAFPALQYLESVDEGGVAWRAGLRMGD
FLIEVNGQNVVKVGHRQVVNMIRQGGNTLMVKVVMVTRHPDMDEAVHKKAPQQAKRLPPP
AISLRSKSMTSELEEMVSPWKKKSEYEQQPAPVPSMEKKRTVYQMALNKLDEILAAAQQT
ISASESPAPGGLASLGKHRPKGFFATESSFDPHHRSQPSYERPSFLPPGPGLMLRQKSIG
AAEDDRPYLAPPAMKFSRSLSVPGSEDIPPPPTTSPPEPPYSTPPAPSSSGRLTPSRGGG
PFNPGSGGPLPASSPASFDGPSPPDTRVGTRDKGLYHGGPLPPAHHHPPHHHHHHVPPPQ
PHHHHAHPPHPPEMETGGAPDDPPPRLALGPQPSLRGWRGGGPSPGPGAPSPSHHAGGGA
AGGPAGPRPCRYFQLPPRAASAAMYVPARSGRGRKGPLVKQTKVEGEPHKGALPAPAPAS
PASPQPPPASARGIPPPSPRRSVPASPTSPRAXEENGLPLLVLPPPAPSVDVDDGDFLFV
EPLPPPLEFSNSFEKPESPLTPGPPHPLPDPPTPVTPLPPVPAPAAAAPAPPTLDSTASS
LTSYDSEVATLTQGAPAAPGDPPPPGPPAPAAPAPPAPQPGPDPPPGTDSGIEEVDSRSS
SDHPLETISSASTLSSLSAEGGGSAGGGGRGQRAGATVHPTXHTWTARSFGGSGAPGPSY
PPQLMTPLXASRPGAGGGGGGLRPGPAGTPRPCHPTSPTVSVAGAGNDGLLALSACSGSS
AAGVAGGPVAVEPEVPPVPLPTASSLPRKLLPWEEGPGPPPPPLPGPLSQPQASALATVK
ASIISELSSKLQQFGGSSAAGGALPWARGGSGGSGDSHHGGASYVPERTASLQRQRLSDD
SQSSSLLSKPVSSLFQNWPKSPLPPLPTGTGVSPSATAAPGAISPSASSSSTSSRHLQGV
EFEMRPPLLRRAPSPSLLPASEHKVSPAPRPSSLPILPSGPLYPGLFDIRGSPTGGAGGS
ADPFAPVFVPPHATAGMSGGLGGALSGASRSLSPTRLLSLPPDKPFGAKPLGFWTKFDVA
DWLEWLGLAEHRARFLDHEIDGSHLPALTKEDYVDLGVTRVGHRMNIDRALKFFLER
NT seq
5394 nt
NT seq
+upstream
nt +downstream
nt
atgacccacagccctgcgacaagcgaggacgaggaacgtcacagtgtcagcgagtgtccc
gaggggggctcagagtccgacagctccccagacggaccagggcaaggcctccgggggacc
cggggccggggcagtggggcacctggtaacctggcctcagtccgaggcctccagggccgc
tccatgtctgtccctgacgacgcccacttcagcatgatggtcttcaggattggcatccca
gacctgcaccagacaaaatgcctgcgcttcaatcccgatgccaccatctggacagccaag
cagcaagtgctctgtgccctgagcgagagcctgcaggatgtgctcaactatgggctcttc
cagccggccacctcaggtcgagatgccaatttcctggaggaagagcggctgctgcgagag
tacccccagtccttcgagaagggggtcccctacctggagttccgatacaagacccgagtt
tacaaacagaccaacctggatgagaagcagctggccaagttgcacacgaagacgggcttg
aagaaatttctggagtatgtgcagcttggaacgtctgacaaggtggcacggctgctggac
aaggggctggaccccaactaccatgactcggattcaggagagacccctttgaccctggcg
gcccagaccgaaggctccgtagaggtgattcgaaccctgtgcctgggcggggcccacatt
gacttccgggcccgagacggcatgacagcactacacaaggccgcctgcgcccgacactgc
ctggcgctcacggcactcctggacctcgggggctcccccaactacaaggaccgccgtggg
ctgacccctctgttccacacggctatggtggggggcgatccccgatgctgcgagctgctt
ctgtacaacagggcccagctgggcatctcggacgagaatggctggcaggaaatccaccag
gcctgtcagcggggccactcccagcacctggaacacctgcttttctacggagctgagcct
ggagcccagaatgcctccgggaacacagccctgcacatctgtgctctctacaacaaggag
acctgcgctaggatcctcctctaccgaggggccaacaaagacgtgaagaataacagtgga
cagacgcccttccaggtggcagtgattgctgggaacttcgagctgggggagcttatccga
aaccatcgggaacaggacgtggtgcccttccaggaatccccaaagtatgcagcccggcga
cggggacccccaggagccgggctgacggtgccccctgcactgctcagggccaacagtgac
accagcatggcgctgcctgactggatggtattttccgccccggggacatcgtcctcggcg
gcccctggccctacctcggggccccagggccagtcacagccctcagcccccacaaccaag
ctcagcagcgggaccctccgaagtgccagcagcccccggggtgcccgggcccgctcccca
tcccgagggagacacccagaggaagccaagaggcagccccgaggacggcccagctccagc
gggacgccccgggacggacccaccgggggcacagggggctctgggggccctggggggtcc
ctgggcagccgagggcggcgacggaagctctactcagcagttcccggacgctccttcatg
gctgtgaagtcctaccaggcccagggcgagggggagatctccctgagcaagggcgagaag
atcaaagtgctcagcattggggaaggaggattctgggaaggccaggtcaaaggtcgagtt
ggctggttcccctctgactgcctggaagaggtggcaaaccgatcccaggaaggaaagcaa
gaaagccgcagcgacaaggcgaagagactcttccgacattatactgtgggctcctacgac
agctttgatgccccaagcttgatggatgggattggcccagggagcgattacatcattaag
gagaaaacagtcttgctgcagaagaaagacagcgaagggtttgggttcgtgctccggggg
gccaaggcgcagacccccatcgaggagttcacccccactccggccttcccggcactgcag
tacctggagtctgtggacgaggggggcgtggcatggcgggctggactgcgaatgggagac
ttccttatcgaggtgaatgggcagaatgtggtgaaggtcggccaccgccaggtggtgaac
atgatccgtcagggcggcaacacgctcatggtgaaggtggtgatggtcaccaggcacccg
gacatggatgaggctgtccataagaaagcccctcagcaggctaagcgactcccgcccccg
gccatctccctgcgttccaagtccatgacctcagagctggaggaaatggtctccccctgg
aagaagaaaagtgagtatgagcagcagcctgcaccggtgcccagcatggagaaaaagcgg
actgtgtatcagatggcgctcaacaaactggacgagatcctggctgcagcccagcaaacc
atcagcgccagcgagagccctgcaccgggtggccttgcatccctgggcaagcatcggccc
aaaggcttcttcgccaccgagtcaagcttcgatccccatcaccggtcccagccaagttac
gaacgtccttctttcctgcctccgggacctgggctcatgctccgacagaaatctatcggg
gccgcagaggacgacagaccgtacctagcgcccccagccatgaagttcagccgcagcctg
tccgtgccgggttcggaggacatccccccgccgcccaccacgtccccgccagagcccccg
tacagcaccccgccggccccctcctcctcgggccgcctcaccccctcccgcgggggaggc
cccttcaaccccggctccgggggacccctcccggcctcctcaccggcgtccttcgacggc
ccctctcctccagacacacgcgtgggaacccgagacaagggcctgtaccatggcgggccc
ctgccccccgcgcaccaccatccgccccaccaccatcaccaccacgtgccgccgccccag
ccgcaccaccaccacgcgcatccgccgcaccccccggagatggagacaggcggcgccccc
gacgaccccccgccgcgcctggccctggggccccagcccagcctgcgaggttggaggggc
ggcgggcccagtcccggccccggagcgccgtcgccctcgcatcacgcggggggtggtgcc
gcgggcggcccggcaggcccccggccctgccgctacttccagctgccgccgcgcgccgcc
agcgctgccatgtacgtgcccgcgcgctccggccgcggccgcaaggggccgctggtcaag
cagaccaaggtggagggcgagccgcacaagggcgccctgcccgcccccgcgcccgcgtcc
cccgcgtcgccgcagccgccgccagccagcgcccgcgggatcccgccgcccagcccgcgc
cgctccgtacccgcctcgcccacgtccccgcgggcgnccgaggagaacgggctcccgcta
ctcgtgctgccgccgcctgccccgtcggtggacgtggacgacggcgacttcctcttcgtg
gagccactgcccccgcctctcgagttttccaacagttttgagaagcccgagtcgccgctc
acgcctggaccccctcacccgctcccggacccccctactccggtcacccctttgccccct
gtgccagccccagcggcagctgcccctgccccgcccaccctggactccaccgcatccagc
ctgacgtcctatgatagtgaggtggccacactgacccagggggctcctgcagctcccggc
gatcccccgccaccaggcccaccggccccagcagccccagcgcccccggccccgcagcca
ggcccagatccaccaccgggcacggactctggaatcgaggaggtggacagtcgcagcagc
agtgaccaccccctggagaccatcagtagcgcgtctacgctaagcagtctgtcggcagag
ggaggcggcagcgctgggggcggggggcgtggccagcgggccggagctactgtacaccct
acgtagcatacttggactgccaggtctttcgggggcagcggggcgccaggcccatcgtac
cccccacagctcatgacccctctctaagcttcgaggccgggcgctgggggtgggggtgga
ggcttacgacccggcccagcggggactccgagaccctgtcaccccaccagccccaccgtc
tctgtggctggggccggcaacgatgggctgctggccctgagcgcctgttcagggtcctct
gcagcaggcgtggctgggggcccggtagcagtagagccagaagtccctccggtgccattg
cccaccgcctcttccttgcctcggaagctgctgccctgggaggagggcccgggcccgccg
ccaccaccccttcccgggcctctgtcccagcctcaggcctctgccttggccaccgtcaaa
gccagcatcatcagtgaactcagctccaagctccagcagttcgggggctcctcagcagct
ggaggggctctgccttgggcccggggaggcagcggaggaagcggggacagccaccacggc
ggagccagctatgtccctgagaggactgcctccctgcagcggcagaggctctccgatgac
tcccagtcctcctcgctcctctccaaacccgtcagcagcctgtttcagaactggcccaag
tcacccctgccaccactccccaccggaacgggcgtgtcgccttctgccaccgcagccccc
ggggccatctcaccctcggcctcctcctcctccacctcctcccgccacctccagggtgtg
gagttcgagatgcggcccccgctgctccgccgggcccccagcccctcgctgctgcccgct
tcggagcacaaggtcagccccgcacccaggccctcctccctgcccatcctgccttccgga
cccctctatccaggcctcttcgacatccgaggctcccccaccggaggggcaggcggctcc
gcggacccctttgccccggtctttgtgccaccgcacgctactgcggggatgtccgggggc
ctcggaggagccttgtcgggggcctcacgctccctgtcgcccacccgtctgctgtctttg
cccccggacaagccatttggcgctaaacctctgggcttctggaccaagttcgatgtggcc
gactggctcgagtggctgggcttggctgagcaccgcgcccggttcctggaccacgagatc
gacggctcccacctgccggccttgaccaaggaggactatgtcgacctgggagtcaccagg
gtgggccaccgcatgaacattgaccgggctctcaaatttttcctggagaggtga
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integrated database retrieval system
