Cavia porcellus (domestic guinea pig): 100718573
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Entry
100718573 CDS
T07777
Symbol
Ddx5
Name
(RefSeq) probable ATP-dependent RNA helicase DDX5
KO
K12823
ATP-dependent RNA helicase DDX5/DBP2 [EC:
5.6.2.7
]
Organism
cpoc
Cavia porcellus (domestic guinea pig)
Pathway
cpoc03040
Spliceosome
cpoc05202
Transcriptional misregulation in cancer
cpoc05205
Proteoglycans in cancer
Brite
KEGG Orthology (KO) [BR:
cpoc00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
100718573 (Ddx5)
09160 Human Diseases
09161 Cancer: overview
05202 Transcriptional misregulation in cancer
100718573 (Ddx5)
05205 Proteoglycans in cancer
100718573 (Ddx5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cpoc03041
]
100718573 (Ddx5)
03009 Ribosome biogenesis [BR:
cpoc03009
]
100718573 (Ddx5)
Enzymes [BR:
cpoc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
100718573 (Ddx5)
Spliceosome [BR:
cpoc03041
]
Complex A
U1 snRNP components
U1 related factors
100718573 (Ddx5)
Complex B
100718573 (Ddx5)
Ribosome biogenesis [BR:
cpoc03009
]
Eukaryotic type
Pre-60S particles
Helicases
100718573 (Ddx5)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
P68HR
ResIII
Helicase_C_2
Cas3-like_C_2
ERCC3_RAD25_C
BNIP2
Motif
Other DBs
NCBI-GeneID:
100718573
NCBI-ProteinID:
XP_003465980
Ensembl:
ENSCPOG00000007133
UniProt:
H0V9E4
LinkDB
All DBs
Position
Unknown
AA seq
614 aa
AA seq
DB search
MSSYSSDRDRGRDRGFGAPRFGGSRAGPLSGKKFGNPGEKLVKKKWNLDELPKFEKNFYQ
EHPDLARRTAQEVETYRRSKEITVRGHNCPKPVLNFYEANFPANVMDVIARQNFTEPTAI
QAQGWPVALSGLDMVGVAQTGSGKTLSYLLPAIVHINHQPFLERGDGPICLVLAPTRELA
QQVQQVAAEYCRACRLKSTCIYGGAPKGPQIRDLERGVEICIATPGRLIDFLECGKTNLR
RTTYLVLDEADRMLDMGFEPQIRKIVDQIRPDRQTLMWSATWPKEVRQLAEDFLKDYIHI
NIGALELSANHNILQIVDVCHDVEKDEKLIRLMEEIMSEKENKTIVFVETKRRCDELTRK
MRRDGWPAMGIHGDKSQQERDWVLNEFKHGKAPILIATDVASRGLDVEDVKFVINYDYPN
SSEDYIHRIGRTARSTKTGTAYTFFTPNNIKQVSDLISVLREANQAINPKLLQLVEDRGS
GRSRGRGGMKDDRRDRYSAGKRGGFNTFRDRENYDRGYSSLLKRDFGAKTQNGVYSAANY
TNGSFGSNFVSAGIQTSFRTGNPTGTYQNGYDSTQQYGSNVANMHNGMNQQAYAYPATAA
APMIGYPMPTGYSQ
NT seq
1845 nt
NT seq
+upstream
nt +downstream
nt
atgtcgagttactcgagcgaccgggaccgcggccgggatcgaggctttggggcacctcga
tttggaggaagtagagcaggtccactgtctggaaagaagtttggaaatcctggggagaaa
ctagtaaaaaagaagtggaatcttgatgagcttcccaaatttgagaagaacttttaccaa
gaacacccagatttggctaggcgcacagcacaagaggtggagacctatagaagaagcaaa
gaaattacagttcgaggtcacaattgtccaaaaccagttctaaatttctatgaagcaaac
ttccctgcaaacgtcatggatgtgattgcaaggcagaacttcactgaaccaactgctatt
caagctcagggatggccagttgctctaagtggattggatatggttggagtagcccagact
ggatctgggaagacattgtcttatttgctgcctgccatcgtccacatcaatcatcagcca
ttcctagagagaggtgatggacctatttgtttggtgctggcaccaactcgagaattggcc
cagcaagtgcagcaggtagctgctgaatactgtagagcttgtcgcttgaagtctacttgc
atctatggtggtgctcccaagggaccacagatacgtgatttggagagaggtgtggagatc
tgtattgcaacacctgggagactgattgactttttagaatgtggaaaaaccaatctgaga
agaacaacctatcttgtccttgatgaagcagatagaatgcttgatatgggctttgaacct
caaataaggaagattgtggatcagataagacctgataggcaaaccctaatgtggagtgca
acttggccaaaagaagtgcgacagcttgctgaagatttcctaaaagactatattcatatt
aacattggtgcactggaactaagcgcaaaccacaacattcttcagattgtggatgtatgt
catgacgtagaaaaggatgaaaagcttattcgtctaatggaagagatcatgagtgagaag
gagaacaaaaccattgtgtttgttgaaacaaaaagaagatgtgatgagcttaccagaaag
atgaggagagatgggtggcctgccatgggtatccatggtgacaagagtcaacaggagcgt
gactgggttctaaatgaattcaaacacggaaaagctcctattctgattgctacagatgtg
gcctccagagggctagatgtggaagatgtgaaatttgtcatcaattatgactaccctaac
tcctcagaggattatattcatcgaattggaagaactgctcgcagtaccaaaacaggcaca
gcatacactttctttacacctaataacataaagcaagtgagcgaccttatctctgtgctt
cgtgaagctaatcaagcaattaatcccaagttgcttcagttggtcgaagacagaggttca
ggtcgttccaggggtagaggaggcatgaaggatgaccggcgggacagatactctgcaggc
aaaaggggtggatttaatacctttagagacagggaaaattatgacagaggttactctagt
ctacttaagagagattttggggcaaaaactcagaatggtgtttacagtgctgcaaattac
accaatgggagctttgggagtaattttgtgtctgctggtatacagaccagttttaggacc
ggtaatccaacagggacttaccagaatggttatgatagcactcagcaatatggaagtaat
gttgcaaatatgcacaatggtatgaatcaacaggcatatgcatatcctgctactgcagct
gcacctatgattggctatccaatgcctacaggatattctcaataa
DBGET
integrated database retrieval system
