Cavia porcellus (domestic guinea pig): 100718624 Help Entry 100718624         CDS       T07777                                  Symbol Col4a1 Name (RefSeq) collagen alpha-1(IV) chain   KO K06237   collagen type IV alpha Organism cpoc  Cavia porcellus (domestic guinea pig) Pathway cpoc04151   PI3K-Akt signaling pathway cpoc04510   Focal adhesion cpoc04512   ECM-receptor interaction cpoc04820   Cytoskeleton in muscle cells cpoc04926   Relaxin signaling pathway cpoc04933   AGE-RAGE signaling pathway in diabetic complications cpoc04974   Protein digestion and absorption cpoc05146   Amoebiasis cpoc05165   Human papillomavirus infection cpoc05200   Pathways in cancer cpoc05222   Small cell lung cancer Brite KEGG Orthology (KO) [BR:cpoc00001]  09130 Environmental Information Processing   09132 Signal transduction    04151 PI3K-Akt signaling pathway     100718624 (Col4a1)   09133 Signaling molecules and interaction    04512 ECM-receptor interaction     100718624 (Col4a1)  09140 Cellular Processes   09144 Cellular community - eukaryotes    04510 Focal adhesion     100718624 (Col4a1)   09142 Cell motility    04820 Cytoskeleton in muscle cells     100718624 (Col4a1)  09150 Organismal Systems   09152 Endocrine system    04926 Relaxin signaling pathway     100718624 (Col4a1)   09154 Digestive system    04974 Protein digestion and absorption     100718624 (Col4a1)  09160 Human Diseases   09161 Cancer: overview    05200 Pathways in cancer     100718624 (Col4a1)   09162 Cancer: specific types    05222 Small cell lung cancer     100718624 (Col4a1)   09172 Infectious disease: viral    05165 Human papillomavirus infection     100718624 (Col4a1)   09174 Infectious disease: parasitic    05146 Amoebiasis     100718624 (Col4a1)   09167 Endocrine and metabolic disease    04933 AGE-RAGE signaling pathway in diabetic complications     100718624 (Col4a1)  09180 Brite Hierarchies   09183 Protein families: signaling and cellular processes    04147 Exosome [BR:cpoc04147]     100718624 (Col4a1)    00536 Glycosaminoglycan binding proteins [BR:cpoc00536]     100718624 (Col4a1) Exosome [BR:cpoc04147]  Exosomal proteins   Exosomal proteins of other cancer cells    100718624 (Col4a1) Glycosaminoglycan binding proteins [BR:cpoc00536]  Heparan sulfate / Heparin   Extracellular matrix molecules    100718624 (Col4a1) BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  Collagen C4 Motif Other DBs NCBI-GeneID:  100718624 NCBI-ProteinID:  XP_003477630 Ensembl:  ENSCPOG00000026271 LinkDB All DBs Position Unknown AA seq 1670 aa AA seqDB search MGPRLGLWLLLLPVALLLHEERSRAAAKGGCDGSGGCGKCDCHGVKGQKGERGLPGLQGV IGFPGMQGPEGPHGPPGLKGDTGEPGLPGTKGTRGPPGASGYPGNPGLPGIPGQDGPPGP PGIPGCNGTKGDRGPAGPPGLPGFTGNPGPPGLPGMKGDPGEILGHVPGMLLKGERGFPG PQGMPGPPGQPGLQGPMGPPGFTGPPGPPGPPGPPGEKGQMGSSFQGPKGDKGEQGVSGP PGVPGQAQVQQKGDFAPTGEKGQKGEPGFQGVPGVGEKGEPGKPGPRGKPGKDGEKGERG SPGFPGDSGYPGLPGQPGLKGEKGEAGLPGPPGTVIGTGPLGEKGERGYPGAPGLKGEPG PKGYPGIQGQPGPPGLPIPGQTGPPGFPGDRGEKGDQGLPGVSLPGPKGKDGIPGPPGPP GPPGQPGYTNGIVECQPGPPGDQGPPGAPGQQGLTGEIGEKGQKGDSCLICDTEGLRGPP GPQGPPGEIGFPGQPGAKGDRGLPGRDGVEGVPGPKGAPGLIGQPGAKGEPGEIIFDSRL KGDKGAPGFPGQPGLPGRAGTPGRDGHPGLPGPKGSPGSIGLKGERGPPGEVGFPGSRGD IGPPGLPGFGPIGPIGDKGQIGFPGSPGVPGPPGPKGEAGRTFPLPGPPGADGLPGSPGF PGPQGDRGFPGTPGRPGLPGEKGAMGQPGIGFPGPPGPKGVDGIPGDMGPPGIPGRPGFN GLPGSPGAPGQKGEPGVGLPGLKGLPGVPGIPGTPGEKGSIGGPGVPGEHGAIGPPGLQG IRGDPGPPGVQGPAGPPGAPGLGPPGAMGPPGGPGLPGSSGPPGVKGEKGFPGFPGLDMP GPKGDKGAQGLPGLTGQSGMPGPPGQQGTPGLPGFQGPKGEMGIMGTPGQPGAPGPVGAP GFPGEKGEHGFPGSSGPRGDPGFKGEKGDVGLPGKPGSMDPVDMGTMKGQKGDQGEKGQT GPTGDKGSRGDPGTPGVPGKDGQAGHPGQPGPKGDPGISGTPGAPGLPGPKGAVGGMGLP GTPGEKGVPGIPGQQGFPGSPGEKGAKGEKGQAGLPGIGIPGRPGDKGDQGLAGFPGIPG EKGEKGSAGMPGVPGSPGPKGAPGSIGYQGSPGLPGEKGDKGLPGLDGIPGVKGEAGLPG TPGLIGPTGQKGEPGSDGIPGSAGEKGEPGLPGRGIPGFQGAKGDKGSKGEVGFPGLAGS PGIPGPKGEQGFMGPPGPQGQPGIPGAPGRAVEGPKGDRGPQGQPGVPGLPGPMGPAGLP GLDGRKGEKGNPGWPGPPGVPGPKGDPGFQGLPGIGGSPGITGSKGDMGLPGVPGFQGQK GLPGIQGLKGDQGDQGVPGPKGLPGPPGPPGPYDVIKGDPGLPGPEGPPGLKGLQGPPGP KGQQGVTGSAGIPGPPGSPGYDGAPGQKGETGPFGPPGPRGFPGPPGPDGLPGSMGPPGT PSVDHGFLVTRHSQTTEDPLCPPGTKVLYHGYSLLYVQGNERAHGQDLGTAGSCLRKFST MPFLFCNINNVCNFASRNDYSYWLSTPEPMPMSMAPISGENIRPFISRCAVCEAPAMVMA VHSQTIQIPQCPSGWSSLWIGYSFVMHTSAGAEGSGQALASPGSCLEEFRSAPFIECHGR GTCNYYANAYSFWLATIERNEMFKKPTPSTLKAGELRTHVSRCQVCMRRT NT seq 5013 nt NT seq  +upstreamnt  +downstreamnt atggggccccggcttggcctctggctgctgctgctgcccgtcgcccttctgctccacgag gaacgcagtcgggccgccgccaagggcgggtgcgatggctctggtggttgtggaaagtgt gactgccatggagtgaaaggacagaagggagagagaggcctcccgggactgcagggtgtc attgggtttcctggaatgcagggacctgaggggccacacggacctccaggactgaagggt gacaccggagaaccagggcttcccggcacaaaaggcacgcgagggcccccaggagcatcc gggtaccctggaaacccaggacttccgggtatacccggccaggatggtcccccgggaccc cctggaatcccaggatgcaatggtacaaagggtgacagaggaccagctgggccccctggc ttgcctgggttcacgggaaacccgggaccaccaggactcccagggatgaagggagaccca ggggagatactcggccatgtgcccggcatgctgttgaaaggagagcgagggtttccggga ccccaggggatgcccggccctcctggacagccaggcctccagggacccatgggccctccg ggatttactggaccaccaggtcccccgggccctcctggccctccaggtgaaaagggacag atgggttcgagtttccaggggccgaaaggtgacaagggtgagcagggtgtcagcgggcct cctggggttcctggccaggcacaggtgcagcagaaaggggacttcgctcccacaggagaa aagggtcagaaaggtgaacctggatttcagggagtaccaggcgtcggggagaaaggcgaa cccgggaagccagggcctcgagggaaacctgggaaggacggcgagaagggggagcggggc agtccgggcttccctggtgactcaggatacccaggactcccaggccagccgggcctcaag ggagagaaaggcgaagccggtcttcctggcccacccgggactgtcataggcaccgggcct ctgggagaaaaaggagagcgtggctacccgggcgctcctgggctgaaaggggagccgggc cccaaaggttaccccggaattcaaggccagccgggccccccaggccttcccatcccaggg cagacgggccctcccggcttccccggggatagaggagaaaaaggtgaccaaggattgcca ggcgtgtctctgccgggacccaaggggaaggatggaatcccaggccctccgggtccccct ggacctcctgggcagccaggctacacaaatggcatcgtggagtgccagccaggaccgcca ggcgaccagggtccccccggcgccccaggacaacagggattgacgggggaaatcggagag aaaggccagaaaggagacagctgcctcatctgcgacacagaaggactccgaggcccccct gggccacaggggcccccaggagaaatcggtttcccgggacagccaggggccaaaggcgac aggggcctgccaggccgggatggcgttgaaggggtgcctggtcccaaaggtgcaccaggg ctgataggccagccgggagccaagggagagcccggagagatcatcttcgactcacgactg aaaggcgacaaaggagccccaggttttccaggacagcccggcctccctggaagagcagga acccctggaagagatggtcaccccggacttcctggccccaaaggctccccgggctccata ggactgaagggagaacgcggtccccctggagaagttggcttccctggcagtcgtggtgac attggcccccctggacttccaggatttggtccgattggccccattggtgacaaaggacaa atagggtttcctggaagtcccggggtgccaggcccaccaggtccgaaaggcgaagcagga aggacctttcccttacctgggccccctggtgcagatgggctcccagggtctcccggattc ccaggaccccaaggtgacagaggcttccctgggaccccaggacggccaggcctccctgga gagaagggtgctatgggccagccaggaattggatttccagggcctccaggccccaaaggt gtggacggcatacccggagacatgggtcctccagggatcccaggccgcccgggatttaac ggcttacctggcagccctggtgcacctggccagaagggggagcctggagttggtcttcct gggctcaaaggcctgcctggtgtccctggcattcctggcacccctggagagaaaggcagc atcgggggacctggtgttcccggggagcatggagcaattggcccccctgggcttcagggc atcagaggcgatcctggacctcctggagtacagggacccgcaggcccacctggggctccg ggacttggcccccctggagccatgggcccccctggaggaccaggactaccagggtcatca ggtcctcctggagtaaaaggagagaagggcttccctggattcccaggactggatatgccc ggtcctaaaggagacaaaggggcccaaggacttcctggcctaacaggacagtcagggatg cctggccctcctggacaacagggcacacctggacttccaggcttccaaggtcccaaggga gaaatgggtatcatgggcacccctgggcagccaggggctccaggaccagtgggcgcccca ggatttcctggtgaaaaaggggagcacggcttcccaggctcttcaggacccaggggagac cctggcttcaaaggtgaaaaaggtgatgtcggactccctggcaagccggggtccatggat ccagtagacatgggcacaatgaaaggacagaagggagaccaaggagagaaaggacaaact ggacccactggtgacaaaggatcccgaggcgatcctgggacccccggtgtgcctggcaaa gatggacaggcagggcaccctggacagccaggacccaagggcgacccaggcataagtggc acaccaggcgcacccgggctgcccggacctaaaggagcggttggtggaatgggcctgcca ggaacccctggagaaaagggcgtgcctggcatccccggccagcagggcttccccggctca cctggagagaaaggggccaagggagagaagggacaggcaggtctgcctggcatcgggatt cccgggcggcctggggacaagggagaccaagggctcgcgggcttccctggtatccccgga gagaagggggagaagggcagtgccgggatgccaggtgtgccggggtctccgggccccaag ggggctccgggcagcattggctaccaaggaagcccgggtttgcctggggagaagggtgac aagggtcttccaggactggatggcattcctggcgtcaaaggagaagcaggtctccctggg acacctggcctcataggccccactggccagaagggtgagcccggcagtgacggcatcccg ggctcggcaggggagaagggcgagccaggtctacctggacgaggcatcccaggattccaa ggggccaaaggagacaaaggctcaaagggtgaagtgggtttccccggattggctgggagt cccggaattcctggacccaaaggcgaacaaggatttatgggtcccccggggccgcaaggg cagcccggcattcctggtgcccccggccgtgctgtagagggtcccaagggagaccgagga ccgcagggacagcccggcgttccagggcttccgggacccatggggcctgcagggctccct gggctggacggacggaaaggggaaaaggggaatccaggctggccaggaccgcctggcgtt ccagggcccaagggagaccccggattccagggcctgccgggtattggtggctctccggga atcacaggctccaagggtgatatggggctgccaggagttccaggattccaaggtcagaaa ggtcttcctggtatccagggactgaaaggcgatcagggcgatcaaggtgtccccggccct aaaggtcttccagggccccctggccccccaggtccttacgacgtcatcaaaggtgaccca gggcttcctggccccgagggtcccccaggtctgaaagggctccagggacctccaggaccg aaagggcagcaaggtgtgactggctcagcaggcattcctgggcctcccggaagcccgggc tatgatggtgctcctggccagaaaggagagacaggtcccttcgggccaccaggtcccaga gggttccccggtcccccagggcccgatgggctgcctggatccatggggccccccggcacc ccgtctgtggaccacggcttcctggtgaccaggcacagtcagacgacagaagatccactg tgtccacccgggaccaaggtcctgtaccacggctactctctgctctacgtgcagggcaat gaacgggcacacggtcaggacctgggcacagctggcagctgcctgcgcaagttcagcacc atgcccttcctcttctgcaacatcaacaacgtctgcaacttcgcctcccgcaacgactac tcctactggctgtccacgcctgagcccatgcccatgtccatggcacccatctccggggag aacatccggcccttcatcagcaggtgcgcggtgtgtgaggcgcccgccatggtgatggct gtgcacagtcagaccatccagatcccgcagtgccccagcggctggtcatcactctggatc ggctactccttcgtgatgcacaccagcgcgggtgctgagggctctggccaagccctggct tcccccgggtcctgcctggaggagttcaggagcgcgcccttcatcgagtgccacggccgg gggacctgcaattactatgccaatgcctacagcttctggctcgccaccatcgagaggaac gagatgttcaagaagcccacgccgtccaccttaaaggcgggagagcttcgcacccacgtg agccgctgccaagtatgcatgcgaagaacatag

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