KEGG   Cavia porcellus (domestic guinea pig): 100719104
Entry
100719104         CDS       T07777                                 
Symbol
Exosc1
Name
(RefSeq) exosome complex component CSL4
  KO
K07573  exosome complex component CSL4
Organism
cpoc  Cavia porcellus (domestic guinea pig)
Pathway
cpoc03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:cpoc00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    100719104 (Exosc1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:cpoc03019]
    100719104 (Exosc1)
Messenger RNA biogenesis [BR:cpoc03019]
 Eukaryotic type
  mRNA degradation factors
   3'-5' decay
    Core exosome factors
     100719104 (Exosc1)
 Prokaryotic type
  Archeal mRNA degradation factors
   Exosome components
    Core exosome
     100719104 (Exosc1)
SSDB
Motif
Pfam: EXOSC1 ECR1_N RRP4_S1
Other DBs
NCBI-GeneID: 100719104
NCBI-ProteinID: XP_003479815
Ensembl: ENSCPOG00000001173
UniProt: A0A286XJU9
LinkDB
Position
Unknown
AA seq 195 aa
MVPPVRYCIPGERLCNLEEGSPGSGTYTRHGYIFSSLAGCLTKRSENGALPVVSVMRETE
SQLLPDVGAIVTCKVSSINSRFAKVHILYVGSTPLKNSFRGTIRKEDVRATEKDKVEIYK
SFRPGDIVLAKVISLGDAQSNYLLTTAENELGVVVAHSESGVQMVPISWCEMQCPKTHTK
EFRKVARVQPEFLQT
NT seq 588 nt   +upstreamnt  +downstreamnt
atggtgccaccggtgagatactgcatccctggcgaacgtctgtgtaacttggaagagggt
agccctggcagcggcacctacacccggcatggctacatcttttcgtcgctggccggctgc
ctgacaaagaggagcgagaatggcgcgcttcctgtggtatctgtgatgagagaaacagag
tcccagttactgccagatgtgggagctattgtcacctgtaaggtctctagcatcaattca
cgttttgctaaagtgcacatcttatatgtaggctctacaccactgaagaactcttttcga
ggaactatccggaaagaagatgttcgagcgactgaaaaagacaaggttgaaatttataag
agtttccgcccaggtgacattgtcttggccaaagtgatatccctaggtgatgcacagtcc
aattacttgctgaccactgctgaaaatgagcttggggtggtggtggcccacagtgaatca
ggtgtccagatggttcccatcagctggtgtgagatgcagtgcccgaagacccacaccaaa
gaattccggaaagtggcccgagtacagccggaattcttacagacctag

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