Cavia porcellus (domestic guinea pig): 100719330
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Entry
100719330 CDS
T07777
Symbol
Myo5c
Name
(RefSeq) unconventional myosin-Vc isoform X1
KO
K10357
myosin V
Organism
cpoc
Cavia porcellus (domestic guinea pig)
Pathway
cpoc04814
Motor proteins
Brite
KEGG Orthology (KO) [BR:
cpoc00001
]
09140 Cellular Processes
09142 Cell motility
04814 Motor proteins
100719330 (Myo5c)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cpoc03019
]
100719330 (Myo5c)
04131 Membrane trafficking [BR:
cpoc04131
]
100719330 (Myo5c)
03029 Mitochondrial biogenesis [BR:
cpoc03029
]
100719330 (Myo5c)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
cpoc04812
]
100719330 (Myo5c)
Messenger RNA biogenesis [BR:
cpoc03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Cargo complex
100719330 (Myo5c)
mRNA cycle factors
P-body specific factors
100719330 (Myo5c)
Membrane trafficking [BR:
cpoc04131
]
Others
Actin-binding proteins
Myosins
100719330 (Myo5c)
Mitochondrial biogenesis [BR:
cpoc03029
]
Mitochondrial quality control factors
Mitochondrial dynamics
Retention of mitochondria
100719330 (Myo5c)
Cytoskeleton proteins [BR:
cpoc04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Myosins
100719330 (Myo5c)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Myosin_head
DIL
IQ
Myosin_N
Csm1_N
nSTAND3
AAA_16
AAA_22
Motif
Other DBs
NCBI-GeneID:
100719330
NCBI-ProteinID:
XP_003471832
Ensembl:
ENSCPOG00000007212
LinkDB
All DBs
Position
Unknown
AA seq
1730 aa
AA seq
DB search
MAVAELYTKYNRVWIPDPEEVWRSAEIVQDYRAGDKVLHLRLEDGTELEYPSELGTLPPL
RNPDILVGENDLTALSYLHEPAVLHNLRVRFAEARLIYTYSGIILVAINPYKQLPIYGDA
IIHAYSGQNMGDMDPHIFAVAEEAYKQMARNNRNQSVIVSGESGAGKTVSARYAMRYFAT
VSKSSSNTQVEDRVLASNPITEAVGNAKTTRNDNSSRFGKYTEISFDERNQIVGANMRTY
LLEKSRVVFQSENERNYHIFYQLCASARRSEFRHLKLDRAEEFSYTRMGGSAVIEGVDDE
ADMVETQKTFALLGFHEDFQLDVFTVLAAILHLGNVQVTAAGAERSSISEDDCHLKVFCE
LLGLERSQVAQWLCHRKIVTTSETVVKPMTRLQAINARDALAKKIYAHLFDFIVDKINGA
LGFSGRRHSFIGVLDIYGFETFDVNSFEQFCINYANEKLQQQFNLHVFKLEQEEYMKEDI
PWTLIDFYDNQPVIDLIEAKMGILELLDEECLLPHGTDENWLQKLYNNFVNKNPLFEKPR
MSNTAFLIQHFADKVEYQCEGFLEKNRDTVYETLVETMQASTFHLCALFFQEGPAPSSPF
GSAITVKPAKQVLKSSCKHLRTSVGSKFRSSLALLMETLNATTPHYVRCIKPNDQKLPFE
FDSRRIVQQLRACGVLETIRISAQSYPSRWTYIEFYSRYGVLMTRQELAAGDKKRVCVAV
LHRLIQDSNQYQLGKTKIFFRAGQVAYLEKLRLDTLRQACVVIQKRVRGWLQRKKFLRAR
HAAVIIQRYCRGQLTVRKAVTARALKETWAAIVLQRHCRGYLVRSLYQLIRVAAITLQAH
TRGLLARRKYRKMLEEHKAVILQKHARAWLARRRFQSIRRLVLNVQLAHRVQRLQKKLED
QNRENHGLVEKLTSLAALRAGDTDKVQKLEQELERAAAQRRSTEEKERKYRDAVEQKLAA
LQKHNSELEIQKAQVQLRLQEKTQELEEQMDKLTKQLLDDVQKEERQRALLEKSFELKAQ
DYEKQLQSLREETLALQREKAQLQRELEEERVAREGLKGEVARLSQQAKTISEFEKEIEL
LQMQKIDVEKLVQSQKREMREKMSKVTRQLLESYDIEDVRSRLSAEDLGRLNEDGELWFA
YEGLKKATRVLESHFQSQKDSYEKEIEALNFKVEHLSQEIGRLQKLFREESDVHENVRLE
VARLTLENMMIPDFKQQISELEKQKQELELRLQEQTEKMKGKTEELWDLLSREEEEEEGA
PRRALDSQSERDTAVEEQLRGRQGAGELRQPSEARGEASGLLLENRGLEEELDMKDRVIK
KLQDQVKTLTKTIEKAQDAHPSSGPTEYLGMLQYRREDEARLLQNLILDLKPRGVVVNML
PGLPAHILLMCLRYADAQDDAAMVRSLLDGAISAIKQVVKEHLEDFEMLSFWLSNTCHFL
NCLKQYSGEEEFMRQNSPSQNKNCLSNFDLSEYRQILSDVAIRIYHQFIIVMENSIQPII
VPGMLEYESLQGLSGLKPTGFRKRSSSIDDTDAYTMTSVLQQLSYFHCTMCQSGLDAELV
RQAVKQLFYLIGAVTLNSLFLRKDMCSCRKGMQIRCNISYLEEWLKDKNLQASAAKDTLE
PLSQVAWLLQVKKTTDSDAQEIAERCTSLSTVQIIKILNSYTPIDDFEKRVTLSFVRKVQ
ALLSGREDSVQLMLDTKYLFPATFPFSASPHALEQLQIPSSLKLGFLRRL
NT seq
5193 nt
NT seq
+upstream
nt +downstream
nt
atggcggtagctgagctatacacgaagtacaacagggtctggattccggatcctgaggaa
gtctggaggtcggctgagatagtgcaggactacagagccggggacaaggtcctgcacctg
cggctggaggatggcacggagctggagtacccatctgagctgggcacgctgcccccgctg
aggaaccctgacatcctggtgggcgagaatgacctcacggccctcagctacctgcatgag
ccggccgtcctgcacaacctgcgcgtacgctttgccgaggcccggctcatctacacctac
agtggcatcatcctggtggccattaacccatacaagcagctgcccatctacggagacgcc
atcatccatgcatacagtgggcagaacatgggtgacatggacccacacatcttcgctgtg
gcggaggaggcctataagcagatggccaggaacaacaggaaccagtcggtgatcgtgagt
ggcgagtccggggccggcaagaccgtgtctgcccgctatgccatgcgctactttgccacg
gtcagcaagtccagcagcaacacccaggtggaggacagggtcctggcatccaatcccatc
acagaggccgttggcaatgccaagaccacccgcaacgacaacagcagccgattcgggaaa
tacacagagatcagcttcgatgagaggaaccagatcgtaggcgccaacatgaggacgtac
ctgctggagaagtccagggtggtcttccagtcagagaatgagcggaattaccacattttc
taccagctctgtgcatctgcacggcggtcagagttcagacacctgaagctggatcgtgct
gaagaattcagttacaccaggatgggcggcagtgctgtcattgagggcgtggatgatgag
gcggacatggtggagacacagaagaccttcgcactgctgggcttccacgaggacttccag
ctggacgtattcacagtcctggctgccatcctccacctgggcaacgtgcaggtcactgcg
gcgggtgctgagaggtcctccatcagcgaggacgactgtcacctaaaggtgttctgcgag
ctcctgggcctggagcgcagccaggtggcccagtggctgtgccaccggaaaattgtcacc
acctcagagacggtggtgaaacccatgaccaggctgcaggccatcaacgccagggatgcg
ctggccaagaagatctatgcacacctgtttgacttcattgtggacaagattaatggggcg
ctgggcttctccggcaggcggcactccttcatcggtgtcctggacatttatggttttgaa
acctttgatgtgaacagcttcgaacaattctgcatcaattacgccaatgaaaagctgcag
caacagtttaacctgcacgtcttcaagctggagcaggaggagtacatgaaggaggacatc
ccctggacgctgattgacttctacgacaatcagcctgtcatcgacctgatcgaagcaaag
atgggcattttggagttgctggatgaagaatgcttgctgcctcacggcactgatgagaac
tggcttcaaaagttgtacaataatttcgtcaacaagaaccctctgtttgagaagcctcgg
atgtcaaacacagccttcctcatccagcacttcgccgacaaggtggagtaccagtgcgag
ggcttcctggagaagaacagagacaccgtctacgagacactggtggagaccatgcaggcg
agcacgttccacctctgcgccctctttttccaagaaggcccggctccctcctctcctttc
ggttcggccatcactgtcaagcccgcaaagcaagtgctcaagtccagctgcaagcacctg
cgcacctctgtggggagcaagttccgaagctcgctggccctgctcatggagaccctcaat
gccaccacacctcactacgtccgctgcatcaagcccaatgaccagaagttgcccttcgaa
tttgactccaggagaatcgtgcagcagctgcgggcctgtggcgtcctggagaccatccgc
atcagcgcgcagagctacccgtccaggtggacatatatcgagttctatagtcgctatggt
gtcctcatgacgcggcaggagctggcggccggtgacaagaagcgggtgtgcgtggcagtg
ctgcacagactcatccaggactcgaatcagtaccagctcggcaagaccaagatcttcttc
cgggcggggcaggtggcttacctggagaagctgcggctggacacgctgaggcaggcctgc
gtggtcatccagaagcgcgtgcgcggctggctgcagaggaagaagttcctccgcgcccgg
cacgcggccgtcatcatccagcgctactgccggggccagctgaccgtgaggaaagcagtc
acagcgcgggccttgaaggagacctgggcggccatcgttctccagcgccactgccgcggg
tacctggtccgcagcctgtaccagctgatccgcgtggccgccatcaccctccaggcccac
acccgaggcctcctggccagaaggaagtaccggaagatgctggaggagcacaaggcagtg
atcctgcagaaacacgcgcgggcctggctggccaggcgcaggttccagagtatccgacgc
ctcgtgctcaacgtgcagctggcccacagggtccagcgtctgcagaagaagctggaggac
cagaacagggagaaccacgggctggtggagaagctgaccagcctggctgccctgcgggct
ggcgacacagacaaggttcaaaagctggaacaggagctggagcgggcagcagcccagcgg
cgcagcaccgaggagaaggagaggaaatacagggatgctgtggagcagaaactggcagcc
ctgcagaagcacaattcagagctggaaatccagaaagcgcaagtacagctgcggcttcag
gagaagacgcaggagctggaagaacaaatggacaagctcaccaagcagctcctggacgac
gtgcagaaagaggaacggcagcgggcccttcttgagaaaagctttgagctgaaggcgcag
gactacgagaagcagctgcagtctctgagagaagagaccctagctctgcagcgagagaag
gcgcagctgcagcgggagctggaggaggagcgcgtggcccgggaaggcctgaagggggag
gtggctcggctaagccagcaggcaaagaccatctctgagttcgagaaggagatcgagctg
ctgcagatgcagaagatcgacgtggaaaagctggtgcagtcgcagaaacgggagatgaga
gagaagatgtccaaggtcaccaggcagcttctcgagagctacgacattgaagacgtgagg
agcaggctgtctgcagaggacctggggcgcctgaacgaggacggggagctctggtttgca
tacgaagggctcaagaaggccacgagggtcctggaaagccacttccagtcccagaaggac
agctatgagaaggagatcgaggctctgaacttcaaagtggagcacctcagccaggagatc
ggccgcctgcagaagctgttccgagaggagagcgatgtgcatgagaacgtccggctcgag
gtggcccggctgaccttggagaacatgatgattccagactttaaacagcagatttcagag
ctggagaaacagaagcaagagctcgaactccgcctccaggagcaaacggagaagatgaaa
gggaagacagaagagctgtgggacctgctcagccgtgaggaggaggaggaagaaggggcc
ccgagaagggccctggactcccagagtgaaagagacaccgcggtggaggagcagctgaga
gggcggcagggggctggggagctgaggcagccttcagaggctagaggggaagcgtccggg
cttcttttggaaaacaggggtctcgaggaagagctggacatgaaggacagagtgattaaa
aagctgcaggaccaagtgaagaccttaaccaagaccattgaaaaagcccaggacgcacac
ccatcatcgggacccacggagtacctgggcatgctgcagtaccggagggaagatgaggcc
aggctcctccagaacctcatccttgacctgaagccccgtggcgtggtggtgaacatgttg
cccgggctgccggcgcacatcctgctcatgtgcctgcggtacgctgacgctcaggacgac
gcggccatggtgcgctccctcctggacggcgccatcagcgccatcaagcaggtggtaaag
gaacatctggaagacttcgaaatgctgtccttttggctctccaatacctgtcatttcctc
aactgcctgaagcagtacagtggagaagaggaattcatgagacagaacagtccgagtcag
aacaagaactgcttgagcaactttgacctttcagagtacagacagattcttagcgacgtg
gccatacggatctatcatcagttcatcatcgtcatggagaatagcatccagcccataata
gtgccgggcatgctggagtacgagagcctgcagggcctctcgggcctcaagcccaccggc
ttccggaagcgctcctccagcatcgacgacacggatgcctacaccatgacctcggtcctg
cagcagctgagctacttccattgcaccatgtgccagagcgggctggatgccgagctggtg
cggcaggcagtgaagcagctcttctacctcatcggggccgtgaccctgaacagcctcttc
ctgcgcaaggacatgtgctcctgcaggaaggggatgcagatcagatgcaacatcagctac
ctggaggagtggctgaaagacaagaacctgcaggccagcgcagccaaggacaccttggag
ccgctttctcaggtggcctggctgctgcaggtcaagaagaccacggacagtgatgcccag
gagatcgccgagcgctgcacctcgctgtccaccgtgcagatcatcaagatcctcaactcc
tacacacccatagatgactttgagaagagagtgaccctgtccttcgtgcgcaaagtgcag
gccctgctgagtggccgggaggactctgtgcagctgatgctggacaccaagtacctgttc
cctgccacctttcccttcagcgcctcgccgcatgcactggagcagctgcaaatccccagc
agcctcaagctgggcttcctgcgtcgtctttag
DBGET
integrated database retrieval system
