Cavia porcellus (domestic guinea pig): 100719487
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Entry
100719487 CDS
T07777
Symbol
Ercc6
Name
(RefSeq) DNA excision repair protein ERCC-6 isoform X1
KO
K10841
DNA excision repair protein ERCC-6
Organism
cpoc
Cavia porcellus (domestic guinea pig)
Pathway
cpoc03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
cpoc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
100719487 (Ercc6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
cpoc03036
]
100719487 (Ercc6)
03400 DNA repair and recombination proteins [BR:
cpoc03400
]
100719487 (Ercc6)
Chromosome and associated proteins [BR:
cpoc03036
]
Eukaryotic type
Chromatin remodeling factors
B-WICH complex
100719487 (Ercc6)
DNA repair and recombination proteins [BR:
cpoc03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
Other TCR factor
100719487 (Ercc6)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
DEAD
SesA
FapA
Motif
Other DBs
NCBI-GeneID:
100719487
NCBI-ProteinID:
XP_005002108
Ensembl:
ENSCPOG00000009484
UniProt:
H0VEQ8
LinkDB
All DBs
Position
Unknown
AA seq
1473 aa
AA seq
DB search
MPSEGSPHCCQTQEQEPVRSPRVGAEEGAPVEQEQEHGGAAEAGECPPSPSSACGPSTSA
EDCTSAAVRRGPALLHIDRHQIPAVEPSAQALELQGLGVDVYDQAVLEQGVLQQVDSALH
EASRATQLADAEKEYHAVLDDLTSCTTSLRQIDKIIEQLSPQAATNRDVNRKLDSVKRQK
HNKEQQLKKITAKQKRLQAVLGGAAVRVELDHGSLEQEDAEPGPSCLGSMLMPAQETAWE
ELIRTGQMTPFGTQVPQKTEKKPRKLMLNEASGFEKYLADQAKLSFERRKQAASRRASRK
APASAQSEPGAPARESEPKPRSKALSQADRRLQKHLRKLQRRALQLQFQGRPGQPRGKRP
PEGDSKGGSEGEEPRACPPEPLELDRAAEGAGEEVGASPSAEGADCEPRPVPRAQKRRRK
ALVQGSDDDFSPSSGEEAEAEAAGKGGGPSRKAVRCRDDGDGEHYKQRLRRWNKLRLRDK
EERLKLEDDSEESDAEFDEGFKVPGFLFRKLFKYQQTGVRWLWELHCQQAGGILGDEMGL
GKTIQIIAFLAGLSYSKIRTRGSNYRFEGLGPTMIVCPTTVMHQWVKEFHTWWPPFRVAI
LHETGSYAHRKEKLIRDIAHCHGILITSYSYVRLMQDDISRHDWHYVILDEGHKIRNPNA
AITLACKQFRTPHRIILSGSPMQNNLRELWSLFDFVFPGKLGTLPVFMEQFSVPITMGGY
ANASPVQVKTAYRCACVLRDTINPYLLRRMKSDVKMSLSLPDKNEQVLFCRLTDEQHKVY
QNFIDSKEVYQILNGEMQIFSGLVALRKICNHPDLFSGGPKNLGGLPDEELEEGQFGYWK
RSGKMIVVESLLKIWHRQGQRVLLFSQSRQMLHILEVFLRARGYSYLKMDGSTTIASRQP
LITRYNQDTSIFVFLLTTRVGGLGVNLTGANRVIIYDPDWNPSTDTQARERAWRIGQKRQ
VTVYRLLTAGTIEEKIYHRQIFKQFLTNRVLKDPKQRRFFKSNDLYELFTLTSPDSTQST
ETSAIFAGTGSDVPTPRRHLKRRTPPAFGADQDAPKCGRFPDSATRTGAATPAKAKPKAI
GAEGSTVASGAGGLGDAHPGGGVTAGDGAGEETGAGSGPEAPLVTSGHGGSAASLRVSRA
PGPPAEEDPTTDQAPSAAGHSGQVPAEPPWENGQAGSRSWKHKSKTKHQAVAEEGALEQQ
RKPGSARHRRDAKFEGTRVPHLVKRRPYHRADAEPEPAAGARSGDDYVLEKLFKKSVGVH
SVVRHDAIMDGASPDYVLVEAEANRVAQDALKALRLSRQQCLGAASGIPTWTGRQGSRVR
GRFGQKRNSSLSGQRPPSSSAEKCQDGVEHFSGRVQDPDSSPAALASSSLLARMRARNHL
TLPERPESRATAEAPTPPPCATEHDELLVEMRNFIAFQARVDGQASTREILQEFESRLST
SQSCVFRELLRNLCSFHRTPSGEGVWRLKPEYC
NT seq
4422 nt
NT seq
+upstream
nt +downstream
nt
atgccgagtgaggggagcccccactgctgtcagacccaggagcaggagcctgtgcggagt
ccgcgggtcggagctgaggagggtgcgcctgtggagcaggagcaggagcatgggggtgcc
gccgaggccggggagtgcccgccctccccttcctctgcctgtgggccgtccacctctgcc
gaggactgcacctcagcagccgtgaggagaggcccggccctgctgcacatcgacagacat
cagatcccggcagtggagcccagtgcgcaggccctggagctgcagggcctgggcgtggat
gtgtatgaccaggccgtgctggagcagggtgtgcttcagcaggtggacagcgccctgcac
gaggccagccgtgccacccagctcgcagatgctgagaaggagtatcatgcggtcctggat
gacctcacgtcatgtacgacatctctgaggcaaattgataaaattattgagcaactcagc
cctcaggctgccaccaacagagacgtcaacaggaaactggattctgtaaagcgacagaag
cataataaggagcagcagctgaagaagatcacagcaaagcagaagcgcctccaggccgtc
ctcgggggagcggccgtgagagtggagctggaccacggcagcctagagcaggaggatgca
gagccaggcccgtcctgccttggcagcatgctcatgcccgcccaggagaccgcatgggag
gagctcatccgcaccggccagatgacgccgttcggtacccaggtccctcagaaaacagag
aagaagcctaggaagctcatgctcaacgaggcgtcaggcttcgagaagtacctggcggac
caagccaagctgtcttttgagaggaggaagcaagctgccagtaggagagcatccaggaaa
gccccggcctcggcccagtccgagccaggcgcgccagccagggaaagcgagccgaagccc
aggagcaaggctctgtcgcaggcagaccggcgcctgcagaagcacctcaggaagctccag
aggagggcgctgcagctgcagttccagggcaggccggggcagcccagggggaagaggccc
ccggagggagactccaagggaggctcggagggtgaggagccccgggcctgccccccggag
cccctggagctcgatcgggcggcagagggagccggggaggaggtcggggccagcccgtcc
gcagaaggcgcggactgtgagccgaggcctgtgcccagggcccagaagcgccggcggaaa
gccctggtgcagggcagcgatgatgacttttcgccgagttccggggaagaggccgaggcc
gaggccgcaggaaagggaggaggacccagtcgcaaggcggtgcgctgccgggacgatggc
gatggagagcattacaagcagcggctgaggaggtggaataaacttagattgcgggacaaa
gaggaacgtctgaagcttgaagatgactcagaagagagtgatgcagaatttgacgaaggc
tttaaagtaccaggttttctgttcagaaagctctttaagtaccagcagacaggtgttagg
tggctgtgggaattgcactgccagcaggcaggaggaattctgggagacgagatgggattg
ggcaagaccatccagataattgccttcttggcaggtctgagctacagcaagatcaggact
cgcggttcaaattacaggttcgaggggctgggccccaccatgatcgtctgcccgacgacg
gtgatgcaccagtgggtgaaggagttccacacgtggtggcctcccttccgagtggcgatt
ctacacgaaaccggctcctatgcccacaggaaggagaagctaattcgagacattgctcat
tgtcacggaatcttgatcacttcttactcctacgtccggctgatgcaggatgacattagc
aggcacgactggcactatgtgatcttggacgaagggcacaaaattcgaaaccccaacgct
gccatcaccctggcttgcaaacagttccgcacgcctcatcggatcatcttgtccggctca
ccaatgcagaacaacctccgagagctgtggtcgctctttgactttgtcttccccggaaag
ttgggcaccttgcccgtgtttatggagcagttctccgtccccatcaccatggggggatac
gccaatgcttctcctgtgcaggtgaaaactgcttacagatgtgcctgtgtcttacgggac
accatcaacccgtacctgctgcggaggatgaagtcggacgtgaagatgagcctgtctttg
ccagataaaaacgaacaggtcttattttgccgccttacagatgagcagcataaagtctac
cagaatttcattgattctaaagaagtttaccagattctcaatggggagatgcagattttt
tctggacttgtagccctgagaaaaatctgcaaccaccctgacctcttttctggaggcccc
aagaatctcggcggtctccccgatgaggagctggaagagggtcaattcgggtactggaag
cgttcggggaagatgattgttgtcgagtctttgctgaaaatatggcacagacagggtcag
cgagtactgctcttctctcagtccagacagatgctgcacatcctggaagtgttcctgaga
gcccgggggtactcctatctcaagatggatgggagcaccaccatcgcctctcggcagccg
ctgatcaccagatacaaccaggacacgtccatcttcgtgtttctcctgaccacgcgtgtg
ggcggcctaggcgttaacctgaccggggccaacagggtgatcatctacgaccctgactgg
aacccgagcactgatacacaggcccgggagcgagcgtggaggatcggccagaagcggcag
gtgactgtgtaccggctcctgacggcgggcaccatcgaggagaagatctaccaccggcag
atcttcaagcagtttctgaccaacagagtgctaaaagatccaaagcagaggcggtttttc
aagtccaatgacctttacgagctgtttactctgacaagccccgactcgacccagagcacg
gaaacaagcgctatttttgcaggaactggctcggatgttccaacgcccagacgccatctg
aaaaggaggactccgccggccttcggggcagaccaggatgctccgaagtgcgggaggttc
ccagattctgccacacgtacaggcgcagccactccggccaaggctaaacccaaggcaatc
ggggctgaaggaagcacggtagcttccggtgcaggtggccttggtgacgcccacccaggt
ggcggggtgactgctggtgatggggctggagaggaaacaggtgcagggtctggaccagag
gcaccgctggtgaccagcggacatgggggcagcgccgcatccctgagggtcagcagggcg
cctgggccacctgctgaggaggaccccaccacggatcaggcgccttctgctgccggacac
agcggccaggtcccagcagagcccccttgggagaacggccaggcggggagtcggtcctgg
aagcacaagtccaagacgaagcaccaggcagtggcggaagagggggccctggagcagcag
cggaagcccgggagcgccaggcaccgcagggacgccaagtttgagggcacccgagtgccg
cacctggtgaagcggaggccgtaccatcgggccgacgctgagcctgagcctgcggctggg
gctcgcagtggtgacgactacgtcctggaaaagctcttcaagaagtcagtgggcgtgcac
agcgtggtgaggcacgatgccatcatggacggggccagcccagactacgtgctggtggag
gcagaagccaaccgtgtggcgcaggacgccctgaaagccctgcggctgtcccgtcagcag
tgcctgggtgctgcgtctggcattcccacctggacaggccgccagggctccagagtgagg
ggtagatttgggcagaagaggaactccagcctctccgggcagcgccctccatcgtcttca
gcagagaaatgccaggatggtgtggagcacttcagcgggagagtgcaggacccggactcc
tcccctgccgccctggcgtcctcctccctcctggccaggatgcgggcgagaaaccacctg
accctgcccgagcgcccggagagcagggccacagcggaggcgcccacgccgccaccctgc
gccactgagcacgatgagctgctggtggagatgcggaacttcatcgccttccaggcccgc
gtggacggccaggccagcactcgcgagatcctgcaggagttcgagtcccggctgtccacc
tcgcagtcctgcgtcttccgggagctgctgcggaacttgtgcagcttccacaggacgccg
agcggggagggggtgtggagactcaagccggagtactgctga
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integrated database retrieval system
