Cavia porcellus (domestic guinea pig): 100719584
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Entry
100719584 CDS
T07777
Symbol
Sox17
Name
(RefSeq) LOW QUALITY PROTEIN: transcription factor SOX-17
KO
K04495
transcription factor SOX17 (SOX group F)
Organism
cpoc
Cavia porcellus (domestic guinea pig)
Pathway
cpoc04310
Wnt signaling pathway
Brite
KEGG Orthology (KO) [BR:
cpoc00001
]
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
100719584 (Sox17)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cpoc03000
]
100719584 (Sox17)
Transcription factors [BR:
cpoc03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
100719584 (Sox17)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HMG_box
Sox17_18_mid
HMG_box_2
HMG_WDHD1
HTH_24
Motif
Other DBs
NCBI-GeneID:
100719584
NCBI-ProteinID:
XP_005002064
LinkDB
All DBs
Position
Unknown
AA seq
414 aa
AA seq
DB search
MSSPDAGYASDDQSQPRSALPTVMAGLGPCPWAESLSPLGDMKVKGEVAASSGVPGGTAG
RAKGESRIRRPMNAFMVWAKDERKRLAQQNPDLHNAELSKMLGKSWKALTLAEKRPFVEE
AERLRVQHMQDHPNYKYRPRRRKQVKRLKRVEGGFLHGLAEPQAAALGPEGGHVAMDGLG
LAFPEQGFPAGPPLLXPHMGGHYRDCQSLGAPPLRRATRCPRPDTSPLDTVEPRPGFFAA
PLPENCPAPSGYSYAQVSDYAVAPEPPAGPLHPRLGPEAAGPAVPGLLAPPSALHMYYGA
MGSPAAGGARGFHLQQQQPPPPPHAPPGPGQPSPPPEALPCRDGTDPGQPAAELLGEVDR
TEFEQYLHFVCKPEMGLPYQGHDSGVNLADSHGAISSVVSDASSAVYYCNYPDV
NT seq
1245 nt
NT seq
+upstream
nt +downstream
nt
atgagcagcccggatgcggggtacgccagtgacgaccagagccagccccggagcgcgctg
cccacggtgatggcagggctgggcccgtgcccctgggcagagtcgctgagccccctcggg
gacatgaaggtgaagggcgaggtggcagcgagcagcggagtgccggggggcaccgcgggc
cgggccaagggcgagtctcgcatccggcggccgatgaacgctttcatggtgtgggctaag
gacgagcgcaagcggctggcgcagcagaacccggatctgcacaacgcggagttgagcaag
atgctcggcaagtcgtggaaggcgctgacgctggcggagaagcggcccttcgtggaggag
gccgagcggctgcgcgtgcagcacatgcaggatcaccccaactacaagtaccggccgcgg
cggcgcaagcaggtgaaacggctgaagcgggtggagggaggcttcctgcacggcctcgcc
gagccgcaggccgccgcgctgggccccgagggcggccacgtggccatggacggcctgggc
ctggccttcccggagcagggcttccccgcggggccgccgctgctgnccccgcacatgggc
ggccactaccgggactgccagagcctaggcgcgcccccgctgagacgagctacccgctgc
ccacgcccagacacgtcccctctagacaccgtagagccgagacccggcttcttcgccgcg
ccgctgcccgagaactgcccagcgcccagcggctacagctacgcgcaagtctcggactac
gcggtggccccggagccgcccgccgggcccttgcacccgcgcctggggcccgaggcggcg
ggccccgccgtgccggggctcctggcgccccccagcgccctgcacatgtactacggcgcc
atgggctccccggcggcgggcggcgcgcgcggcttccacctgcagcagcagcagccgccg
ccgccgccgcacgcgcccccgggccccggccagccttcgccccctcccgaggcgctgccc
tgccgggacggcacggaccccggacagcctgctgccgagctcctcggggaggtggaccgc
acggaattcgaacagtacctgcatttcgtgtgcaaacccgagatgggcctcccctaccag
ggacacgactccggcgtgaatctcgcggacagccacggggccatctcctccgtggtgtcc
gatgccagctccgcggtatattactgcaactaccctgacgtctga
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