KEGG   Cavia porcellus (domestic guinea pig): 100719830
Entry
100719830         CDS       T07777                                 
Symbol
Polr2d
Name
(RefSeq) DNA-directed RNA polymerase II subunit RPB4
  KO
K03012  DNA-directed RNA polymerase II subunit RPB4
Organism
cpoc  Cavia porcellus (domestic guinea pig)
Pathway
cpoc03020  RNA polymerase
cpoc03420  Nucleotide excision repair
cpoc05016  Huntington disease
Brite
KEGG Orthology (KO) [BR:cpoc00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    100719830 (Polr2d)
  09124 Replication and repair
   03420 Nucleotide excision repair
    100719830 (Polr2d)
 09160 Human Diseases
  09164 Neurodegenerative disease
   05016 Huntington disease
    100719830 (Polr2d)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:cpoc03021]
    100719830 (Polr2d)
   03400 DNA repair and recombination proteins [BR:cpoc03400]
    100719830 (Polr2d)
Transcription machinery [BR:cpoc03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol II specific subunits
     100719830 (Polr2d)
DNA repair and recombination proteins [BR:cpoc03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      100719830 (Polr2d)
SSDB
Motif
Pfam: RNA_pol_Rpb4 Tfb4 Maelstrom
Other DBs
NCBI-GeneID: 100719830
NCBI-ProteinID: XP_003478808
Ensembl: ENSCPOG00000002571
UniProt: H0UYV9
LinkDB
Position
Unknown
AA seq 142 aa
MAAGGGDPRAGDVEEDASQLIFPKEFETAETLLNSEVHMLLEHRKQQNESAEDEQELSGV
FMKTLNYTARFSRFKNRETIASVRSLLLQKKLHKFELACLANLCPETAEESKALIPSLEG
RFEDEELQQILDDIQTKRSFQY
NT seq 429 nt   +upstreamnt  +downstreamnt
atggcggccggtggcggtgatccgcgggctggcgacgtggaagaggacgcctcacaactc
atcttccccaaagaatttgaaacagctgagacacttctaaattccgaagttcatatgctt
ttggagcatcggaagcaacagaatgagagtgcagaggatgagcaggagctctctggggtc
ttcatgaaaactttgaactacacagctcgattcagtcgattcaaaaacagagagaccatt
gccagtgtccgtagtttgctgctccagaaaaagctgcataagtttgaactggcctgtttg
gccaatctttgcccagagactgctgaggagtccaaggctcttatcccaagcctggaggga
cgatttgaagatgaagagctgcagcagattcttgatgacatccagacaaagcgtagtttt
cagtattaa

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