Cavia porcellus (domestic guinea pig): 100720089
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Entry
100720089 CDS
T07777
Symbol
Nphp3
Name
(RefSeq) LOW QUALITY PROTEIN: nephrocystin-3
KO
K19360
nephrocystin-3
Organism
cpoc
Cavia porcellus (domestic guinea pig)
Brite
KEGG Orthology (KO) [BR:
cpoc00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
cpoc03037
]
100720089 (Nphp3)
Cilium and associated proteins [BR:
cpoc03037
]
Primary cilia and associated proteins
Nephronophthisis-related proteins
100720089 (Nphp3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_NPHP3
TPR_12
NPHP3_hel
TPR_10
NPHP3
TPR_1
TPR_8
TPR_7
TPR_2
TPR_MalT
TPR_16
TPR_19
TPR_17
TPR_14
TPR_3
TPR_11
NPHP3_N
ANAPC3
TPR_9
TPR_6
HAT_Syf1_CNRKL1_C
ARM_TT21_4th
AAA_16
KAP_NTPase
NACHT
DUF2225
MIT
AAA_22
AAA_19
AAA_14
RNPP_C
T2SSE
FliD_C
Viral_helicase1
TPR-S
14-3-3
DUF627
Motif
Other DBs
NCBI-GeneID:
100720089
NCBI-ProteinID:
XP_003476539
Ensembl:
ENSCPOG00000015737
LinkDB
All DBs
Position
Unknown
AA seq
1337 aa
AA seq
DB search
MGTASSLVSPAGGEVIEDTYGAGGGEACEIPVEVKPKARLLRSSFRRGAGAAAGTGPGSL
PRAAGGAGLLGASFKSTGSSVPELEYAAAEYERLKKEYEIFRVSKNQELLSMGRREAKLD
TENKRLRAELQALQKTYQKILREKESALEAKYQAMERAATFEHDRDKVKRQFKIFRETKE
NEIQDLLRAKRELESKLQRLQAQGIQVFDPGESDSDDNCTDVTASGTQCEYWAGGALGSE
PSLGSMIQLQQSFRGPEFAHSSVDVEGPFANVNRDDWDIAVASLLQVTPLFSHSLWSNTV
RCYLMYTDETQPEMDLFLKDYSPKLKRMCETMGYFFHAVYFPVDVENQYLTIRKWEIEKS
SLVILFIHSTLPRMIGIEAVFTGIMLAVMGKVEWEVSSDSVQQLIDQVCNLSKAHKAKII
DHSGDPAEGVYKTYICVEKIIKQDILGFENTDLESKDLGAEEPIPEEDDFGDVLWDIHDE
QEQMEAFQQASNSAHELGFEKYYQRLNDLVAAPAPIPPLLVSGGPGSGKSLLLSKWIQLQ
QKSSPNMLILSHFVGRPMSTSSESSLIIKRLTLKLMQHSWSVSTLTLDPAKLLEEFPHWL
EKLSARHQGSIIIIIDSIDQVQQVEKHMKWLIDPLPVNVRVIVSVNVETCPAAWRLWPTL
HLDPLNPKDAKSIIIAECHSVDIKLSKEQEKKLEQHCRCPATCNALYVTLFGKMMARAGK
RGNLDKILHQCLQCQDTVALYRLVLHSIQESMASDVEKELMRQVLCLINVSHNGLSESEL
MELYPETPWAILTSLIYSLYSMCLLTYGCGLLRFQHLQAWETVRLEYMNDPTVISSYRQK
LISYFTLQLSQDRVTWRSADELPWLFQQQGGRQKLHDCLLNLFVSQNLYKRGHFAELLSY
WQFVGKDKSAMATEYFDSLKQYEKNCEGEENMICLADLYETLGRFLKDLGLLSQAVVPLQ
RSLEIRETALDPDHPRVAQSLHQLASVYVQWKKFGNAEQLYKQALEISENAYGADHPHTA
RELEALATLYQKQNKYEQAEHFRKKSFKIRQKATRKKGNLYGFALLRRRALQLEELTLGK
DTPENARTLNELGVLYYLQNSLETADQFLKRSLEMRERVLGANHPDCAQSLNNLAALYHE
KKQYDKAEELYERALDIRRRALAPDHPSLAYTVKHLAILYKKMGKFDKAVPLYELAVEIR
QKSFGQKHPSVATALVNLAVLYSQMKKYNEALPLYERALKIYEDSLGQMHPRVGETLKNL
AVLSYEEGDFEKAAELYKRAMEIKEAEMSLLGGKAPSRHSSSGDTLSLKTTHSPNVFLPQ
GQSGLSQLSASKKTLKN
NT seq
4014 nt
NT seq
+upstream
nt +downstream
nt
atgggcactgcctcgtcgctcgtgagcccggcgggcggggaggtgattgaggacacgtac
ggggcgggcggcggcgaggcctgcgagatcccggtggaggtgaagcccaaggcccgcctg
ctgcgcagctcgttccgccggggcgcgggggcggcggcggggaccgggcccgggtctctg
ccccgcgcggcgggcggggccgggctgctgggcgccagcttcaagtccaccggctcgtcg
gtgccggagctggagtacgcggcggccgagtacgagcggctcaagaaggagtacgagatc
ttccgggtcagcaagaaccaggagctgttgtccatgggccgccgcgaggccaagctggac
accgaaaacaagcggctgcgggccgagctgcaggcgcttcagaaaacttaccagaagatt
cttcgggaaaaagaaagtgctttagaagcaaaataccaagcaatggagagagcagctacc
tttgaacatgacagagataaagttaaaaggcaattcaagatttttagggagaccaaagaa
aatgaaattcaggacttactgagagccaagcgagagctggagagcaaacttcagaggttg
caggctcaagggatccaagtatttgatcctggagagtcggattcagatgacaactgtaca
gatgttactgcttctggaacccagtgtgagtactgggccgggggagccttgggcagcgag
ccctccctggggagcatgatccaacttcagcagtccttccgaggcccggagtttgcacat
agttctgtggatgtggaagggccctttgcaaatgtcaacagagatgactgggatattgct
gtagctagtttgctgcaggttactcccttgttttcccattctctgtggagtaacactgtc
agatgttacctcatgtacacagacgaaacccagcccgaaatggatcttttcttgaaggac
tattcacctaaacttaaaagaatgtgtgagacaatgggatattttttccacgctgtttat
tttccagtagatgttgaaaatcagtacctcactataagaaaatgggaaattgagaagagt
tctttggttattttattcattcactcaactttaccaagaatgattgggattgaagcggtc
ttcacaggcatcatgttagctgtgatgggaaaagtagaatgggaagtcagttccgactct
gtccagcaattgattgatcaagtgtgtaacctcagtaaggcccacaaagccaagatcatt
gatcattctggagatcctgcagaaggagtatataaaacttatatttgtgtggagaagatt
attaaacaggacatactgggttttgagaacacagacctggagagtaaggatttgggtgct
gaagagcccattccggaagaggatgactttggggatgtcctgtgggacatacacgatgaa
caagaacagatggaagcttttcagcaggcctctaactcagcccacgagttgggattcgag
aaatattatcagcgccttaatgatctagtggcagcaccggccccgattccaccccttctg
gtgtctggaggaccaggttctggaaagtcccttcttttatccaagtggattcagttgcag
cagaagagttcccctaacatgctgatcctttcccattttgtggggaggcccatgtcaacc
agctcagagtcctccctaattattaaacggctgactctaaagttgatgcagcactcctgg
tcagtgtccacgctgacgcttgaccctgccaagctgctggaagaattcccacactggctg
gaaaagctttctgctcgacatcaaggcagcatcatcatcatcatcgactccatagatcag
gttcagcaagttgaaaaacacatgaaatggctcatagacccactgcccgtgaacgtcaga
gtgattgtctcggtgaacgtggaaacctgccctgcggcctggaggttgtggcctacactt
catctggatcccttaaatccaaaagatgcaaagtctattataattgcagagtgccactca
gtagatattaagttaagtaaggagcaggagaaaaagctagaacaacactgtcgttgtcct
gccacctgcaatgccctctatgttaccctgttcggcaaaatgatggcacgtgctgggaaa
agaggcaatttagataaaatccttcatcagtgcctgcagtgtcaggatactgtcgcgtta
tacagacttgttctacactccatccaggagtccatggccagcgatgtggagaaggagctg
atgagacaggttctgtgcctcatcaatgttagtcacaatggtctgagtgaatcagaacta
atggaactctatcctgaaacaccctgggccatcctgacctccctcatttacagtttatac
agcatgtgtttgttaacctatggttgtggcttgctcaggtttcagcatctgcaggcctgg
gaaacagtgagacttgagtacatgaatgaccccacggttatctcttcatacaggcaaaaa
ctcatcagctatttcaccctgcagctgagtcaggatagagtcacctggagaagtgcggac
gagctgccctggcttttccagcagcagggaggtagacagaagctgcatgattgccttctc
aatctcttcgtgtctcaaaacctttacaaaagaggacactttgctgagttgctgagttat
tggcagtttgttggcaaagacaaaagtgcgatggcaacagaatactttgattcattgaag
cagtatgaaaaaaactgtgaaggcgaggagaacatgatttgcttagctgatctctatgaa
accctggggcgatttctcaaggacctaggccttctcagtcaggcagtggtacctttgcag
agatctctggaaattcgagaaacggctttagatccagatcacccaagagtagcccagtct
cttcaccagctggcaagtgtatatgttcagtggaagaagtttggcaatgcagaacagctg
tataaacaggccttggaaatctcagaaaatgcttacggtgcagaccatccacatactgct
cgtgaacttgaagcacttgcaactttgtaccagaaacaaaataaatatgaacaagctgaa
catttcagaaaaaaatcctttaaaattcgtcagaaagctacaaggaaaaaaggcaacttg
tatggatttgcccttttacgcagacgagccctgcagttagaagagcttactctgggtaag
gacacacctgagaacgcgcggaccctcaacgaactgggtgttctctactatcttcagaat
agcctggaaacagcagaccagtttttgaagcgttccctagagatgagggagcgagttcta
ggagccaatcaccctgactgtgcccagtctctgaacaatctggcggctctgtaccatgag
aagaagcagtacgacaaagcagaggagctctatgagagagctttggacattcggagacga
gccttagctccagaccacccttctttagcatacacagtgaagcaccttgcaatcctgtat
aagaaaatggggaaatttgacaaagccgtaccgttgtatgaattggctgttgaaattcgg
cagaaatcctttggccagaagcaccctagtgtagctactgccctagtgaacctagcggtt
ctttatagccaaatgaaaaagtacaatgaagccttgccattatacgaaagagcattgaag
atttatgaggatagcctgggtcagatgcatcctagagttggagaaaccttaaaaaattta
gctgtgcttagctatgaagaaggggattttgaaaaagcagctgaactgtacaagagggca
atggaaataaaagaagcagaaatgtcactcttgggtggaaaagctccttcgaggcattca
tcaagtggagacacactcagcttaaaaacaactcattctcctaacgttttccttcctcaa
ggacaaagtggtctgtcccagctttctgcctcaaagaaaactttgaagaattaa
DBGET
integrated database retrieval system
