Cavia porcellus (domestic guinea pig): 100720211
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Entry
100720211 CDS
T07777
Symbol
Mms19
Name
(RefSeq) MMS19 nucleotide excision repair protein homolog isoform X1
KO
K15075
DNA repair/transcription protein MET18/MMS19
Organism
cpoc
Cavia porcellus (domestic guinea pig)
Brite
KEGG Orthology (KO) [BR:
cpoc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
cpoc03036
]
100720211 (Mms19)
03400 DNA repair and recombination proteins [BR:
cpoc03400
]
100720211 (Mms19)
Chromosome and associated proteins [BR:
cpoc03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
100720211 (Mms19)
DNA repair and recombination proteins [BR:
cpoc03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
Other NER factors
100720211 (Mms19)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MMS19_C
MMS19_N
HEAT_EZ
Motif
Other DBs
NCBI-GeneID:
100720211
NCBI-ProteinID:
XP_003479820
Ensembl:
ENSCPOG00000006715
LinkDB
All DBs
Position
Unknown
AA seq
1028 aa
AA seq
DB search
MAAAAPEAGVPTGALWGLVQDFVMGQQDGPAEQVVADVKSGSYTVLQVVEALGSSLENPE
PQTRARGIQLLSQVLLQCHSLLLEKEVVHLILFYENRLKDHHLVIPSVLQGLRALSLCVT
MPPGLAVSVLKAIFQEVHVQSLLQVDRHTVYNIIINFMRTREEELKGLGADFTFGFIQVM
DGEKDPRNLLVAFRIVHDLISREYSLGPFVEELFEVTSCYFPIDFTPPPNDPHGIQRDDL
ILSLRVVLASTPQFAEFLLPLLIEKVDSEILSAKLDSLQTLNACCAIYGQKELKDFLPSL
WASIRREVFQTASEQVEAEGLAALHSLTACLSRSVLSADAEDLLDPFLSNILQDCRHHLC
EPDMKLVWPSAKLLQAAAGASARACDHITSHVLPLLLEQFHKHSQSNQRRTILEMILGFL
KLQKWSYDDKDERPLCGFKDQLCLLVFMALADSSAQLQLVGIRALTVLGAQPDFLSSEDL
EQTVDHLYRLSFLEEDSQRCRVAALEASGALATLYPGAFSNHLIPKLAEELHRGESDFAR
GDGSPKCSPHLRCLQALSAVSTNPSIVKETLPLLLEHLGRINKGNVVTGPSDIIAVCQSL
QQVAEKCQQDPESYWYFHQTAVPCLFALAVQASMPEKEPSVLREVLLEDEVLAAMVSVIG
TATTHLSPELAAQSVTHIVSLFLDGNTSFLPENSFPSRFQPFQDGSSGQRRLVALLMAFV
CSLPQNVEIPRLNQLMRELLELSCCRSCPFSSNAAAKCFAGLLNKHPAGQQLDEFLQLAV
DTVEAGLGSGPTRHQAFTLLLWVTKALVLRYHPHSSSLTTQLMGLLSDPELGPAAADGFS
LLMSDCTDVLTRAGHAEVRIMFRQRFFTDNVPALVQGFHAAPQDVKPNYLKGLSHVLHRL
PKPVLLPELPTLLSLLLEALSCSDSVVQLCTLSCLQPLLLEAPQVMSLHVDTLVTKFLNL
SSSPSMAVRIGALQCMHALTRLPTPVLLPYKPQVIRALAKPLDDKKRLVRKEAVSARGEW
FLLGSPGS
NT seq
3087 nt
NT seq
+upstream
nt +downstream
nt
atggccgccgccgctccagaggcgggcgtgcctacaggcgccctgtgggggctcgtgcaa
gacttcgtcatgggtcagcaggacggccctgctgaacaggtggttgcagatgtgaaatcc
ggcagctatacagtgttacaagtggtggaagcccttgggtcctctctggagaatccagag
ccccaaactcgggcacgaggtatccagcttttgtcacaggtgttactccagtgtcactcc
ttgcttctggagaaagaagtggttcatctgatcctgttctatgagaaccggttgaaggac
catcatcttgtgatcccatctgtccttcagggcttgagagcacttagcctgtgtgtgact
atgccaccagggctggctgtctctgtgcttaaagccatcttccaagaagtacatgtacag
tctctgctgcaggtagaccgacatacagtctacaatatcatcatcaacttcatgagaact
cgagaagaagagctaaaaggtctaggagctgacttcacatttggcttcatccaggtgatg
gatggggaaaaagatccccgcaacctcctggtggctttccgcattgttcatgacctcatc
tccagggagtatagcctgggaccttttgtggaagagttgtttgaagtgacatcctgttat
ttccccattgattttactcctcctccaaatgatccccatggtatccagagagacgatctt
atcctgagtctacgagtggtgctggcttctacaccacagtttgctgagttcctactgccc
ctattgattgagaaagtagattctgagattttgagtgccaagctggattctctgcagact
ctgaatgcttgctgtgctatatatgggcaaaaggaactgaaggacttccttcccagcctt
tgggcttctatccgcagagaggtgttccagacggccagcgagcaggtggaggcagaaggc
ctggcagccctgcactccctgactgcgtgtttgtcccgatctgtgctgagcgctgatgcc
gaggaccttcttgaccccttccttagcaacattctacaagactgcaggcaccatctgtgt
gagccggacatgaaactggtgtggcctagtgccaagctgttgcaggcagctgcaggtgca
tctgcccgggcctgtgaccacattaccagccacgttctgcctttactgctggagcagttt
cacaagcatagtcagagcaaccagcggcggacaatccttgaaatgatcctgggtttcttg
aaactgcagaagtggagctatgatgataaagatgaaaggcctctgtgtggcttcaaggac
cagctgtgtttattggtcttcatggctctagcagactccagtgcccagcttcagcttgtt
ggcatccgagcactcacagtcttgggtgcccagccagatttcctatcttctgaggacttg
gagcagacagtggatcacctgtatagactgagcttcttggaggaggattcccagcgttgc
agggtagcagcactggaagcatcaggagccctggccaccctctaccctggggccttcagc
aaccatctaatacccaagcttgctgaggagctgcacagaggggagtctgactttgctaga
ggggatgggtcacccaagtgctcaccgcatttgcgctgtctgcaagctttgtcagctgtt
tcaacaaatcccagcatcgtcaaggagacgctgcctctgctgctggagcatcttgggagg
ataaataaaggcaatgtggttacaggacccagtgacattattgccgtctgtcagagtctc
cagcaggtggcagaaaaatgccagcaggaccctgagagctactggtatttccatcagaca
gctgtaccttgcttgtttgccttggctgtacaggcttccatgccagagaaggagccctca
gttttgagagaagtgctattggaagatgaggtcttggctgccatggtgtctgtcattggt
actgccactactcacttgagccctgagttagcagcccagagtgtcacccacatagtgtcc
ctcttcttagatggcaacacctcctttctgcctgaaaacagcttcccaagcagattccag
ccattccaggatggctcctcaggccagaggcggctggttgcattgcttatggcttttgtg
tgttccctgcctcagaatgtggaaatccctcggctgaaccagctcatgcgagagcttctg
gagttaagctgctgccgtagctgtcccttctcctccaacgctgctgcgaagtgttttgca
ggactcctcaacaagcatcctgcagggcagcagctggatgaattcctgcagttggctgtg
gatacggtggaagctggactgggctctgggcccactcgtcatcaggccttcacactgctg
ctctgggtaacaaaggctctagtactcagataccatcctcacagctcctcccttacaact
cagctcatgggcctcctgagtgacccagagttaggtccagcagcagctgatggcttttct
ctgctcatgtctgactgcactgatgtgctgactcgcgctggccacgctgaagtgcggatc
atgtttcgccagcggttcttcacagacaatgtgcctgctctggtccagggcttccatgct
gctccccaagatgtgaagccaaactacctgaagggtctgtctcatgtacttcacaggctg
cccaagcctgtgctcttgccagagctgcccacacttctttccctgctgctagaggccctg
tcctgctctgactctgtggttcagctctgtaccctcagctgccttcagcctcttctactg
gaagcacctcaagtcatgagtcttcatgttgacacgctggtcaccaagtttctgaacctc
agctccagcccttccatggctgtccggatcggtgcactgcagtgtatgcatgctctcact
cgcctgcccactcctgtgttgctgccatataaaccacaggtgatccgggcattagccaag
ccactggatgacaagaagagactggtgcgtaaggaagcagtgtcagccaggggagagtgg
tttttgctagggagccccggcagctga
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integrated database retrieval system
