Cavia porcellus (domestic guinea pig): 100720739 Help Entry 100720739         CDS       T07777                                  Symbol Smarcc1 Name (RefSeq) SWI/SNF complex subunit SMARCC1   KO K11649   SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C Organism cpoc  Cavia porcellus (domestic guinea pig) Pathway cpoc03082   ATP-dependent chromatin remodeling cpoc04714   Thermogenesis cpoc05225   Hepatocellular carcinoma Brite KEGG Orthology (KO) [BR:cpoc00001]  09120 Genetic Information Processing   09126 Chromosome    03082 ATP-dependent chromatin remodeling     100720739 (Smarcc1)  09150 Organismal Systems   09159 Environmental adaptation    04714 Thermogenesis     100720739 (Smarcc1)  09160 Human Diseases   09162 Cancer: specific types    05225 Hepatocellular carcinoma     100720739 (Smarcc1)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03021 Transcription machinery [BR:cpoc03021]     100720739 (Smarcc1)    03036 Chromosome and associated proteins [BR:cpoc03036]     100720739 (Smarcc1) Transcription machinery [BR:cpoc03021]  Eukaryotic type   RNA polymerase II system    Coactivators     BAF/PBAF complex      100720739 (Smarcc1) Chromosome and associated proteins [BR:cpoc03036]  Eukaryotic type   Chromatin remodeling factors    BAF complex     100720739 (Smarcc1)    PBAF complex     100720739 (Smarcc1)    GBAF(ncBAF) complex     100720739 (Smarcc1) BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  SWIRM-assoc_2 SWIRM-assoc_3 SWIRM-assoc_1 SWIRM Myb_DNA-binding Myb_DNA-bind_6 HEAT_GCN1 Chromo BRCT_2 DUF919 SpeFL Motif Other DBs NCBI-GeneID:  100720739 NCBI-ProteinID:  XP_003477090 Ensembl:  ENSCPOG00000010153 UniProt:  H0VG91 LinkDB All DBs Position Unknown AA seq 1104 aa AA seqDB search MAAAAGGGAGAAAGAVGAGGAGASAAGLAVYRRKDGGPASKFWESPETVSQLDSVRVWLG KHYKKYVHADAPTNKTLAGLVVQLLQFQEDAFGKHVTNPAFTKLPAKCFMDFKAGGTLCH ILGAAYKYKNEQGWRRFDLQNPSRMDRNVEMFMNIEKTLVQNNCLTRPSIYLIPDIDLKL ANKLKDIIKRHQGTFTDEKSKASHHIYPYPSSQEDEEWLRPVMRKDKQVLVHWGFYPDSY DTWVHSNDVDAEIEDPPIPEKPWKVHVKWILDTDVFNEWMNEEDYEVDESRKPVSFRQRI STKNEEPVRSPERRDRKASANARKRKHSPSPPPPTPAESRKKSGKKGQASLYGKRRSQKE EDEQEDLTKDMEDPTPVPNIEEVVLPKNVNPKKDSENTPVKGGTVADLDEQDEETVTTGG KEDEDPSKGDQSRSVDPGEDNVTEQTNHIIIPSYASWFDYNCIHVIERRALPEFFNGKNK SKTPEIYLAYRNFMIDTYRLNPQEYLTSTACRRNLTGDVCAVMRVHAFLEQWGLVNYQVD PESRPMAMGPPPTPHFNVLADTPSGLVPLHLRSPQVPAAQQMLNFPEKNKEKPIDLQNFG LRTDIYSKKTLAKSKGASAGREWTEQETLLLLEALEMYKDDWNKVSEHVGSRTQDECILH FLRLPIEDPYLENSDASLGPLAYQPVPFSQSGNPVMSTVAFLASVVDPRVASAAAKAALE EFSRVREEVPLELVEAHVKKVQEAARASGKVDPTYGLESSCIAGTGPDEPEKLEGAEEDK METDTDGQQPEKAENKGENETDEGDKAQDGENEKHNEKEQDGEVTEDTKSEEKETEENKE LTDACKDRENDTVKKKVEHEISEGNVATAAAAALASAATKAKHLAAVEERKIKSLVALLV ETQMKKLEIKLRHFEELETIMDREKEALEQQRQQLLTERQNFHMEQLKYAELRARQQMEQ QQHGQNPAQVHQHAGGPGLAPLGAAGHPGMMPHQQPPPYPLMHHQMPPPHPPQPGQMPGP GSMMPGQPMPGRMMPTVAANIHPAGSGPTPAGMPPMAGNILGPRGPLTAPNGMYPPPPQP PPPPPPADGVTPPPAPGPPAPAAP NT seq 3315 nt NT seq  +upstreamnt  +downstreamnt atggccgcggcggcgggcgggggcgcgggagcggcggcaggagcagtgggggccgggggc gcgggggcgtcggccgcgggcctggctgtataccggcggaaggacgggggcccagcgagc aagttctgggagagcccggagacggtgtcgcagctggactcggtgcgcgtctggctgggc aagcattacaagaagtatgttcacgccgatgctcctaccaataaaacactggctggcctg gtggtgcaacttctccagttccaggaagatgccttcgggaagcatgtcaccaaccccgcc ttcaccaaactacctgcaaagtgtttcatggacttcaaagctggaggcaccttgtgtcac attcttggggctgcttacaagtacaaaaatgaacaggggtggaggagatttgatttacag aatccttccagaatggatcgtaatgttgaaatgtttatgaacattgaaaagacattggtg cagaacaattgtctgaccagacccagcatctacctcattccagacattgatctgaagttg gctaacaaactgaaggatatcatcaagcggcatcagggaacattcacagatgagaagtcg aaggcttcccaccacatatacccatacccttcctcacaagaggatgaagaatggttgcga cccgtgatgagaaaggacaagcaggtgttagtgcactggggattttacccagacagctat gatacttgggtgcatagtaatgacgttgatgcagaaatcgaagacccaccaattccagaa aagccgtggaaggttcatgtgaaatggatcttggatactgatgttttcaatgagtggatg aatgaagaagattacgaagtggatgagagcaggaagccagtgagtttccgtcagcgaatt tcaacaaagaatgaagagccagtcagaagcccagagcggagagaccgaaaggcctccgcc aatgcccggaagaggaagcactcaccctcgccgccaccccccacgcccgctgagtcgcgc aagaaaagcggcaagaagggccaagctagtctgtacgggaagcgcagaagtcagaaagag gaagatgagcaagaagatcttaccaaggacatggaggacccaacaccagtacccaatata gaggaagtggtgcttcccaaaaatgtaaacccaaagaaagatagtgaaaataccccggtt aaaggaggaactgtagccgatctagatgagcaggatgaagaaaccgttacaacaggagga aaggaagatgaagatcctagcaaaggggatcagagtcggtcggttgaccctggtgaagat aatgtcaccgagcaaaccaatcacattattatccccagctacgcctcgtggtttgattat aactgtattcatgtgattgaacggcgcgcacttcctgaatttttcaatggaaaaaataaa tccaagactccagaaatatacctggcgtatcgaaactttatgatcgacacgtatcgtctg aatcctcaagaatatctgaccagcactgcctgtcggaggaacttgactggagatgtgtgt gccgtgatgagggttcatgccttcctagagcagtggggcctggtcaattaccaagttgat ccagaaagtcgacccatggcaatgggaccccctccgactcctcacttcaatgtattagct gacaccccctcagggcttgtgcctctgcatcttcgatcacctcaggtccctgctgctcag cagatgttaaatttccctgagaagaacaaggaaaaaccaatagatttgcagaattttggt cttcgtactgacatttattccaagaaaacattagcaaagagtaaaggtgctagcgctgga agagagtggacagaacaggagacccttctcctcctggaggccctggagatgtacaaggat gattggaacaaagtgtctgaacatgtaggaagtcgcactcaagatgagtgcatccttcac tttttgaggctccccatcgaggacccatacctcgagaattcggatgcctcccttgggccg ctggcctaccaacctgtccctttcagtcagtcgggaaacccagtcatgagcactgtggct ttcttagcatctgtggtggaccctcgtgtagcatctgctgcagcgaaagcagctctggaa gagttttctcgagtacgggaggaggttccactggagttggttgaagcacatgtgaagaaa gttcaagaagctgcacgagcctccggaaaggtggatcccacttatggcctggaaagcagc tgcattgcaggcactgggcccgatgagccggagaagctggaaggagctgaagaggacaaa atggaaacggatactgacggtcagcagccggaaaaggcagagaacaaaggagaaaatgaa acagatgaaggtgataaagcacaagatggagaaaatgaaaaacacaatgagaaggaacaa gatggtgaagttactgaagataccaaatcagaagaaaaggagactgaagagaacaaggaa ctcactgatgcatgtaaagacagagaaaatgacaccgtgaagaagaaagtagagcatgag atttccgaaggaaatgttgccaccgctgcggcagctgctcttgcctcagctgccaccaaa gccaagcacctggctgctgtggaagagagaaagatcaagtctctggtagctctgctggtt gagacgcaaatgaagaaactagagatcaaactccggcatttcgaggagcttgaaacgatc atggacagagagaaagaggctctggaacagcagaggcagcagttgcttactgaacgacag aacttccacatggagcagctgaaatacgctgagttacgtgcccgccagcaaatggaacag cagcagcatggccagaaccctgcacaggtgcatcagcatgcagggggccctggcctggcc ccactcggagccgctggtcacccgggcatgatgccccatcagcagccccctccctaccca ctgatgcaccaccagatgccaccacctcacccgccccagccaggtcagatgccaggccca ggttccatgatgcccggccagcccatgccaggccgcatgatgcctaccgttgcagccaac atccaccctgcgggaagtggtcctacccctgctggtatgcctccgatggcagggaacatc ttaggaccccgagggcctctcacagcgcccaatggcatgtatccccctccgccacagccg ccaccgccaccgccgcctgcagatggggtcactcccccgcctgctccaggtccgccggcc ccggccgctccttag

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