Cavia porcellus (domestic guinea pig): 100720743
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Entry
100720743 CDS
T07777
Symbol
Pan3
Name
(RefSeq) PAN2-PAN3 deadenylation complex subunit PAN3 isoform X3
KO
K12572
PAB-dependent poly(A)-specific ribonuclease subunit 3
Organism
cpoc
Cavia porcellus (domestic guinea pig)
Pathway
cpoc03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cpoc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
100720743 (Pan3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cpoc03019
]
100720743 (Pan3)
Messenger RNA biogenesis [BR:
cpoc03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
100720743 (Pan3)
mRNA degradation factors
3'-5' decay
Pan complex
100720743 (Pan3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Pan3_PK
Pkinase
Motif
Other DBs
NCBI-GeneID:
100720743
NCBI-ProteinID:
XP_003477456
Ensembl:
ENSCPOG00000013349
UniProt:
A0A286XZ61
LinkDB
All DBs
Position
Unknown
AA seq
741 aa
AA seq
DB search
MDGGALTDTSLTDSYFSTSFIGVNGFGSPVETKYPLMQRMTNSSSSPSLLNDSAKPYTGH
DPLTSPASSLFNDFGALNISQRRKPRKYRLGMLEERLVPVGSKARKAKTPIGCLADRCKS
GVPINMVWWNRVTENNLQTPNPTASEFIPKGGSTSRLSNVSQSNMSAFSQVFSHPSMGSP
ATAGLAPGMSLSAGSSPLHSPKITPHTSPAPRRRSHTPNPASYMLPSSASTPVNNPVSQT
PSSGQVIQKETVGGTTYFYTDTAPTPLTGMVFPNYHIYPPTAPHVAYMQPKANAPSFFMA
DELRQELINRHLITMAQIDQADMPAVPTEVDSYHSLFPLEPLPPPNRIQKSSNFGYITSC
YKAVSSKDDLPYCLRRIHGFRLVNTKCMVLVDMWKKIQHSNIVTLREVFTTKAFTEPSLV
FAYDFHAGGETMMSRHFNDPNADAYFTKRKWGQHDGPLPRQHAGLLPESLIWAYIVQLSS
ALRTIHTAGLACRVMDPTKILITGKTRLRVNCVGIFDVLTFDNSQNNNPLAIMAQYQQAD
LISLGKVVLALACNSLAGIQRENLQKAMELVTINYSSDLKNLILYLLTDQNRMRSVNDIM
PMIGARFYTQLDAAQMRNDVIEEDLAKEVQNGRLFRLLAKLGTINERPEFQKDPTWSETG
DRYLLKLFRDHLFHQVTEAGAPWIDLSHIISCLNKLDAGVPEKISLISRDEKSVLVVTYS
DLKRCFENTFQELIAAANGQL
NT seq
2226 nt
NT seq
+upstream
nt +downstream
nt
atggatggaggtgctttaactgatacaagtctcacagattcctatttcagcaccagcttt
attggagtcaatggatttggaagcccagtagagacaaagtatcccttaatgcagagaatg
actaatagtagcagctctccaagccttctaaatgacagtgccaagccatatacaggccat
gatcctctaacttcacctgcttcatccttgtttaatgactttggtgccctcaacatctct
cagagaagaaagccaaggaagtatcgcctggggatgctggaggagaggctagttccggtg
ggatcaaaggcacgaaaagcaaagacccctattggctgccttgctgacaggtgtaaatca
ggagtacccatcaatatggtttggtggaacagagtcacagaaaacaatttacagacacca
aatcctactgcaagcgagtttattcctaaaggaggatcaacctccaggctgagtaacgtg
tcccagtcaaatatgtctgccttctctcaagttttctctcacccatccatgggaagccct
gctactgctggattagcgccaggaatgtcactgtctgctggatcttcccctcttcactcc
cccaagattactccgcatacttctcctgctccaagaagaagaagccacactccaaatcca
gcgagttacatgctgccttctagtgcctctacacctgttaacaatcctgtttctcagact
ccgtcttctggtcaggtgattcagaaggaaactgttggtgggacgacttacttctataca
gacacagctccaacacctttgactggaatggtatttccaaactatcacatttaccctcca
actgcacctcatgttgcttatatgcaaccaaaagcaaatgctccttcttttttcatggcg
gacgaactccgacaggagctgatcaacagacatttaataacaatggctcaaattgatcaa
gcagatatgccagcagttcctacagaagttgacagctaccatagcctattccctctagaa
ccactgccaccccccaaccgtatacagaaatcaagtaattttggatacattacatcttgt
tacaaagctgtgagtagcaaagatgatctgccatattgccttcggaggatacatggtttt
cgtcttgttaacacaaagtgtatggtgttggttgatatgtggaaaaaaattcagcactca
aatattgtaaccctgcgtgaagtatttaccactaaagcattcacagaaccttcacttgta
tttgcatatgatttccatgctggaggagaaactatgatgagcagacactttaatgaccct
aatgctgatgcctatttcacaaagagaaagtggggccaacatgatggaccattacccagg
cagcatgctggactattgccagaatccctcatttgggcgtacattgtccagctgagttct
gcattgcgtaccattcacacggcaggtttggcatgtcgagtcatggacccaacaaagatc
ctgataactggcaaaacaaggttgcgagtaaattgtgttggaattttcgatgttttaaca
tttgataacagtcaaaataataatccattggcaataatggcacagtaccagcaagcagat
ctgatatcattaggaaaagttgtgttggctttggcttgcaactctttggcaggaattcag
agagagaatttacagaaagccatggaattggtgacaatcaattactcttctgacctgaag
aatctgatcttgtatctgttgactgaccaaaataggatgcgaagtgtaaatgacatcatg
cccatgattggtgctcgattttatactcagttggatgctgctcagatgagaaatgatgtc
attgaagaagaccttgcaaaggaggttcagaatggaagactgtttaggctcctagcaaaa
ttgggaacaatcaatgagaggccggagttccaaaaggatcctacttggtcagagactgga
gaccgttatctgttgaaactctttagggatcatctttttcatcaggtgacagaagcgggt
gctccttggattgacctcagtcatatcatttcttgtcttaacaagctagatgctggtgtg
ccagaaaaaataagcctgatttccagagatgagaagagcgtccttgtagtgacgtacagt
gacttaaagcgctgctttgaaaatacttttcaagaactgatcgcagctgcaaatggtcag
ttgtag
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