Cavia porcellus (domestic guinea pig): 100720792
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Entry
100720792 CDS
T07777
Symbol
Abca1
Name
(RefSeq) ATP-binding cassette sub-family A member 1
KO
K05641
ATP-binding cassette, subfamily A (ABC1), member 1
Organism
cpoc
Cavia porcellus (domestic guinea pig)
Pathway
cpoc02010
ABC transporters
cpoc04148
Efferocytosis
cpoc04975
Fat digestion and absorption
cpoc04979
Cholesterol metabolism
cpoc05417
Lipid and atherosclerosis
Brite
KEGG Orthology (KO) [BR:
cpoc00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
100720792 (Abca1)
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
100720792 (Abca1)
09150 Organismal Systems
09154 Digestive system
04975 Fat digestion and absorption
100720792 (Abca1)
04979 Cholesterol metabolism
100720792 (Abca1)
09160 Human Diseases
09166 Cardiovascular disease
05417 Lipid and atherosclerosis
100720792 (Abca1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
cpoc02000
]
100720792 (Abca1)
Transporters [BR:
cpoc02000
]
ABC transporters, eukaryotic type
ABCA (ABC1) subfamily
ABCA1, 2, 3, 4, 7, 12, 13 subgroups
100720792 (Abca1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ABC_tran
R1_ABCA1
ABC2_membrane_3
AAA_21
DUF4162
AAA_23
Motif
Other DBs
NCBI-GeneID:
100720792
NCBI-ProteinID:
XP_023421175
Ensembl:
ENSCPOG00000009387
LinkDB
All DBs
Position
Unknown
AA seq
2203 aa
AA seq
DB search
MACWTQLRLLLWKNLTFRRRQTCQLLLEVAWPLFIFLILTSVRLSYPPYEQHECHFPNKA
LPSAGTLPWVQGIVCNANNPCFRYPTPGEAPGVVGNFNKSIVSRLFSDARRLLLYSQRDT
SMKDIHKVLRTLKQIENSSPKLKLQDFLMDNETFSGFLYHNLSLSRPTVDNILRANVRLR
KVFLQGYQLHLANLCNGSKLDVIKLGEPEISELCGLSRDKLDAAEWMLRSNIDILKPIVR
GLNSTLPYPTEQLAEATRTLLDSLGKLAQELFSMSSWSDMRQEVMFLTNVNSSSSSTQIY
QAVSRIVCGHPEGGGLQIKSLNWYEDNNYKALFGGNGTEEDADTFYDNSTTPYCNDLLKN
LESSPLSRIIWKALKPLLVGKILYTPDTPATRQVMAEVNKTFQELAVFHDVEGMWQELSP
KFWAFMENSQEMDLVRMLLDSKGNEPFWEQQLDGLNWTARDILAFLAKHPEDVQQVNRSV
YTWRDAFNETNRAIQTISRFMECVNLNKLEPIPTEVRLINKSMELLDERRFWAGIVFTGI
TPGSVELPHHVKYKIRMDIDNVERTNKIKDGYWDPGPRADPFEDMRYVWGGFTYLQDVVE
QAIIRVLTGTEKKTGVYVQQMPYPCYVDDIFLRVMSRSMPLFMTLAWIYSVAVIIKGIVY
EKEARLKETMRIMGLDNGILWFSWFISSLIPLLVSAGLLVVIMKLGNLLPYSDPSVVFLF
LCVFATVTILQCFLISTLFSRANLAAACGGIIYFTLYLPYVLCVAWQDYVGFTAKIFASL
LSPVALGFGCEYFALFEEQGIGVQWDNLFESPVEEDGFSLTSSVSMMLFDTFLYGVMTWY
IEAVFPGQYGIPRPWYFPCTKSYWFGEESDEKNHLASSQKGASEICMEEEPTHLKLGVSI
QNLVKVYRDGMKVAVDGLALNFYEGQITSFLGHNGAGKTTTMSILTGLFPPTSGTAYILG
KDIRSELSAIRQNLGVCPQHNVLFDMLTVEEHIWFYARLKGLSEKHVKAEVEQMALDVGL
PPSKLKSKTSQLSGGMQRKLSVALAFVGGSKVVILDEPTAGVDPYSRRGIWELLLKYRQG
RTIILSTHHMDEADILGDRIAIISHGKLCCVGSSLFLKNQLGTGYYLTLVKKDVESSLSS
CRNSSSTVSYLKKEDSVSQSSSDAGLGSDHESDTLTIDVSAISNLIRKHVSEARLVEDIG
HELTYVLPYEAAKEGAFVELFHEIDDRLSDLGISSYGISETTLEEIFLKVAEESGVDAET
SDGTLPARRNRRVFGDKQSCLRPFTEDDAIDPNDSDLDPESRETDLLSGMDGKGSYQVKG
WKLVQQQFVALLWKRLLIARRSRKGFFAQIVLPAVFVCIALVFSLIVPPFGKYPSLELQP
WMYDEQYTFVSNDAPEDMGIQKLLDALTKDPGFGTRCMEGNPIPNTPCLAGDKEWTTAPY
PQTIMNLFQKGNWTMQNPSPACQCSSDKIKKMLPVCPAGAGGLPPPQKKQNTADVLQDLT
GRNISDYLVKTYVQIIAKSLKNKIWVNEFRYGGFSLGVSNSQVFPPSQEVNDAIQQVKKH
LKLAKDSSADRFLNSLGRFMTGLNTKNNVKVWFNNKGWHAISSFLNVINNAILRANLQKG
ENPSQYGITAFNHPLNLTKQQLSEVALLHCNYVVPATLVIIIFICFQQKSYVSSTNLPVL
ALLLLLYGWSITPLMYPASFVFKIPSTAYVVLTSVNLFIGINGSVATFVLELFTNNKLNN
INDILKSVFLIFPHFCLGRGLIDMVKNQAMADALERFGENRFVSPLSWDLVGRNLFAMAV
EGVVFFLITVLIQYRFFFRPRPVNAKLPPLNDEDEDVRRERQRILDGGGQNDILEIKELT
KIYRRKRKPAVDRICVGIPPGECFGLLGVNGAGKSSTFKMLTGDTTVTRGDAFLNKNSIL
SNIDEVHQNMGYCPQFDAITELLTGREHVEFFALLRGVPEKEVGKVGEWAIRKLGLVKYG
EKYAGNYSGGNKRKLSTAMALIGGPPVVFLDEPTTGMDPKARRFLWNCALSIVKEGRSVV
LTSHSMEECEALCTRMAIMVNGRFRCLGSVQHLKNRFGDGYTIVVRIAGSNPDLKPVQEF
FGLAFPGSVLKEKHRNMLQYQLPSSLSSLARIFSILSQSKKRLHIEDYSVSQTTLDQVFV
NFAKDQSDDDHLKDLSLHKNQTVVDVTVLTSFLQDEKVKESYV
NT seq
6612 nt
NT seq
+upstream
nt +downstream
nt
atggcgtgttggactcagctgaggttgctgctgtggaagaacctgactttcagaagaagg
caaacatgtcagctgttgctagaagtggcctggcctctatttatcttcctgattttgacc
tctgttcggctgagctacccaccctacgaacaacatgaatgccactttccgaacaaagcc
ttgccctctgcaggaacgcttccttgggttcaggggatcgtctgtaatgccaacaacccc
tgtttccgttacccaactcctggtgaggctcctggagttgttggaaactttaacaaatcc
attgtgtctcgcctgttctcagatgctcggagacttcttttatacagtcagagagacacc
agcatgaaggatatacacaaagttctgaggacattaaagcagattgagaattcaagccca
aaattgaagcttcaggatttcctgatggacaatgaaaccttctctggattcctgtatcac
aatctctctctctcaagacctactgtggacaacatattaagggcgaatgtccgtctccgc
aaggtatttttgcaaggttaccagttacatttggccaatctgtgcaatggatcaaaatta
gatgtgattaaacttggtgaacctgaaatttccgagctttgtggtctatcaagggacaaa
ctggatgcagcagagtggatgcttcggtccaacatagacatcctgaagccaattgtgaga
ggactgaactctacacttccgtatccaactgagcagctggctgaagccacaagaactttg
ttagacagtcttgggaagctggcccaagagctgttcagcatgagtagctggagcgacatg
cggcaggaggtgatgtttctgaccaatgtgaatagctccagctcttccacccagatatac
caagctgtgtctcgcatcgtttgtggccatcccgagggcgggggactgcagatcaagtct
cttaactggtatgaggacaacaactacaaagctctttttggaggcaatggcacggaggaa
gatgctgacaccttctatgacaactctacgactccttattgcaatgatttgctgaagaat
ttggagtctagtcctctttcccgcattatttggaaagctctcaagcccctgcttgttggg
aagatcctgtatacaccagacactccagccacaaggcaggtgatggccgaggtgaacaag
accttccaggaactggctgtattccatgatgtggaaggcatgtggcaagagctcagtccc
aagttctgggccttcatggagaacagccaagaaatggaccttgtccggatgctgttggac
agcaaaggcaatgaacccttttgggagcagcagttggatggcttaaactggacagcccga
gatatcctggcatttctggccaagcacccggaggacgttcagcaggttaatcgctctgtg
tacacttggagagatgctttcaatgagaccaaccgggcaatccagaccatatctcgcttc
atggagtgtgtcaacctcaacaagctggagcccattcccacagaagtccggctcatcaac
aagtccatggagctgctggatgagaggaggttctgggctggaattgtgttcacgggaatc
actcctggcagtgttgagctgccccatcatgtcaaatacaaaattagaatggacattgac
aatgtggagaggacaaataaaatcaaggatgggtactgggaccctggtcctcgggctgac
ccctttgaggatatgcgctacgtatgggggggctttacctacttgcaagatgtagtggag
caggcaatcatcagggtgctgacaggcactgagaagaaaactggggtctatgtgcagcag
atgccctacccttgttatgttgatgacatcttcctgagggtaatgagccggtcaatgccc
ctcttcatgacactggcctggatttactctgtggctgtgatcatcaagggtattgtgtat
gagaaggaggcacggctgaaagagaccatgcggatcatgggcctggacaacggcatcctg
tggttcagctggttcatcagcagcctcatccctctgcttgtgagcgccggcctgctggtg
gttatcatgaagttgggaaacctgctgccctacagcgaccccagtgtggtgttcctcttc
ctctgtgtttttgccactgtgaccatcctgcaatgcttcctgattagcacgctcttctcc
cgggccaacctggctgctgcctgcgggggaatcatctacttcaccctgtacctgccctat
gtcctgtgtgtggcatggcaggactacgtgggcttcacagccaagatctttgcaagcctg
ctgtctcctgtggctttgggatttggctgtgaatactttgccctttttgaagagcagggc
ataggggtgcagtgggacaatctctttgagagcccagtggaggaggacggcttcagtctc
acctcttcagtctccatgatgctgtttgacaccttcctctatggggtgatgacgtggtac
atcgaagctgtctttccaggtcagtatggaattcccaggccctggtatttcccttgtacc
aagtcctactggtttggtgaggaaagtgatgagaagaatcaccttgcttccagccagaag
ggagcatcagaaatctgcatggaagaggaacccactcacctgaagctgggtgtgtccatt
cagaatctggtgaaggtttaccgagatggcatgaaagtggctgtcgatggcctggcactg
aatttttatgagggccagatcacctccttcctgggccacaacggagcagggaagacaacc
accatgtcaatcctgactggattgttccctcccacctctggcactgcctacatcctaggg
aaagacattcgctcggagttgagcgccatccggcagaacctgggggtctgtccccagcat
aatgtactatttgacatgctgactgtcgaagagcacatctggttctatgcccgcctgaag
gggctctcagagaagcacgtgaaagcggaggtggagcaaatggccctggatgttggtttg
ccacccagtaagctgaaaagcaaaacaagccagctgtctggtggcatgcagagaaagctg
tctgtggccttggcctttgtggggggatccaaggttgtcattctggatgagcctacagct
ggcgtggacccatattcccgcaggggaatctgggagctgctgctgaaatatcggcaaggc
cgcactattattctctccacccaccatatggatgaagcggacatcctgggggacaggatt
gccatcatttcccatgggaagctgtgctgtgtgggttcctccctgtttctgaagaaccag
ctgggaacaggctactacctgaccctggtgaagaaagatgtggaatcctccctcagttcc
tgcagaaacagcagcagcactgtgtcgtacttgaagaaggaggacagtgtttctcagagc
agttctgatgctggcctgggcagcgaccatgaaagtgacacgctgaccatcgatgtctct
gctatctccaacctcatcaggaagcacgtgtctgaagcccggcttgtagaagacattgga
cacgagctgacctatgtgctgccgtatgaagctgctaaggaaggagcctttgtggaactc
ttccatgagattgatgaccggctttcagatttgggcatctccagttatggcatttcagag
actaccctggaagaaatattcctcaaagtggctgaagagagtggggtggatgctgagacc
tcagatggtaccttgccagcaaggcgaaacagacgagtctttggagacaagcagagctgt
cttcgtccgttcaccgaagatgatgctattgatccaaatgattctgacctagacccagag
tccagagagacggatctgctcagtgggatggatggcaagggctcctaccaggtgaagggc
tggaaactcgtacaacagcagttcgtagccctgttgtggaagaggctgctgattgccaga
cggagtaggaaaggattctttgctcagattgtcctgccagctgtgtttgtgtgcattgcc
ctggtgttcagcctgattgtgccaccctttgggaagtaccccagcctggagcttcagccc
tggatgtacgatgagcagtacacgtttgtcagcaatgatgctcctgaggatatgggcatc
cagaaactcttggatgcgctcaccaaagaccccggctttgggaccagatgtatggaagga
aacccaatcccaaatacaccctgcttggcaggagataaagagtggaccactgccccatat
ccccagaccatcatgaacctcttccaaaaagggaactggacaatgcagaacccttcacct
gcctgccagtgtagcagtgacaaaatcaagaagatgctgcctgtgtgtcctgcaggggca
ggagggctgccaccaccacaaaaaaaacagaacactgcagatgtccttcaggacctgaca
ggaagaaacatttcagattatctggtgaagacgtatgtgcagatcatagccaaaagctta
aagaataagatctgggtgaatgagtttcggtacggtggattttcccttggtgtcagtaat
tctcaggtatttcctccaagtcaagaagtaaatgatgccatccaacaagtgaagaaacac
ttgaaactggctaaggacagttctgccgatcgatttctcaacagcttgggaaggttcatg
acaggattgaacaccaaaaacaatgtcaaggtgtggttcaataacaagggctggcatgcc
atcagctctttcctgaatgtgatcaacaatgccatcctccgggccaatctgcagaaggga
gagaatcctagccagtatgggattactgctttcaatcatcccctgaatctgaccaagcag
cagctgtcagaggtggctctattacattgcaattatgtggtccctgccacactggtcatt
atcatcttcatctgcttccagcagaagtcctatgtgtcctccaccaacctgcctgtcctc
gcccttctacttttgctgtatgggtggtcaatcacacctctcatgtacccagcctccttc
gtgttcaagatccccagcacagcctatgtggtgctcaccagtgtgaacctcttcatcggc
atcaatggcagtgtggcgactttcgtgctggagctcttcaccaacaataagctgaataac
atcaatgatatactgaagtctgtgttcctgatcttcccacatttttgcctgggacgaggg
ctgattgatatggtgaaaaatcaggcgatggctgatgccttggaaaggtttggggagaat
cgctttgtgtcaccactgtcttgggacctggtgggacgaaacctttttgccatggctgtg
gaaggggtcgtgttcttcctcattactgttctgatccagtacagattcttcttcaggccc
agacctgtgaatgcaaagcttcctcctttgaatgatgaggatgaagatgtaaggcgagaa
aggcagagaattttggatggtggaggacagaatgacatcttggaaatcaaggagttaact
aagatatatagacggaagaggaagcctgcggttgacaggatttgcgttggcattcctccc
ggtgagtgctttgggcttctgggagttaacggtgctggcaaatcatcaaccttcaagatg
ttaactggagacaccacggttacccgaggggatgcgttccttaacaaaaacagcatctta
tcaaacatcgatgaagtacatcagaacatgggttactgccctcagtttgatgccatcaca
gagctgctgacggggagggagcatgtggagttctttgccctcttgagaggagtcccagag
aaagaagttggcaaggttggtgaatgggcgattcgcaaactgggcctggtgaagtatgga
gaaaaatacgcgggtaactatagcggaggcaacaagcgcaagctgtcaacagccatggct
ttgatcggtgggcctcctgtggtgtttctggatgaaccaaccacaggcatggacccgaaa
gcccggagattcttgtggaattgtgctctcagcattgtcaaggaggggagatcagtagta
ctgacgtctcatagcatggaagaatgtgaagctctttgcactcggatggcaattatggtc
aatgggaggttcaggtgtcttggcagtgtccagcatcttaaaaataggtttggagatggt
tatacgatcgttgtcagaatagcagggtccaaccctgacctgaagcctgtccaggagttt
tttggactcgcctttccaggaagtgtcctaaaagagaaacaccggaacatgctgcagtat
cagcttccgtcttcgttatcttccctggcgaggatattcagcatcctctcccagagcaaa
aagcgactccacatagaagactactctgtttctcagacaacacttgaccaagtatttgtg
aactttgccaaggaccaaagtgatgatgaccacttaaaggacctgtcattacacaaaaac
cagacagtagtggatgtcacagttctcacatcttttctacaggatgagaaagtgaaagaa
agttatgtatga
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integrated database retrieval system
