Cavia porcellus (domestic guinea pig): 100720812 Help Entry 100720812         CDS       T07777                                  Symbol Smarcc2 Name (RefSeq) SWI/SNF complex subunit SMARCC2   KO K11649   SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C Organism cpoc  Cavia porcellus (domestic guinea pig) Pathway cpoc03082   ATP-dependent chromatin remodeling cpoc04714   Thermogenesis cpoc05225   Hepatocellular carcinoma Brite KEGG Orthology (KO) [BR:cpoc00001]  09120 Genetic Information Processing   09126 Chromosome    03082 ATP-dependent chromatin remodeling     100720812 (Smarcc2)  09150 Organismal Systems   09159 Environmental adaptation    04714 Thermogenesis     100720812 (Smarcc2)  09160 Human Diseases   09162 Cancer: specific types    05225 Hepatocellular carcinoma     100720812 (Smarcc2)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03021 Transcription machinery [BR:cpoc03021]     100720812 (Smarcc2)    03036 Chromosome and associated proteins [BR:cpoc03036]     100720812 (Smarcc2) Transcription machinery [BR:cpoc03021]  Eukaryotic type   RNA polymerase II system    Coactivators     BAF/PBAF complex      100720812 (Smarcc2) Chromosome and associated proteins [BR:cpoc03036]  Eukaryotic type   Chromatin remodeling factors    BAF complex     100720812 (Smarcc2)    PBAF complex     100720812 (Smarcc2)    GBAF(ncBAF) complex     100720812 (Smarcc2) BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  SWIRM-assoc_2 SWIRM-assoc_3 SWIRM-assoc_1 SWIRM Myb_DNA-binding Myb_DNA-bind_6 Chromo CD99L2 Motif Other DBs NCBI-GeneID:  100720812 NCBI-ProteinID:  XP_013014542 Ensembl:  ENSCPOG00000033778 LinkDB All DBs Position Unknown AA seq 1248 aa AA seqDB search MRELIGTRTAAPTLKSYGGLRTPVTPVTTNVRLCLGKDLQGGYGGKGRSGRPCRDKRDRG PWRRPHPAAPRARRALCPGFAPCLPPAASAALSVALPALLRETAAGWTGCLVGVLRPRSV RATAPAWAPPRSQYIQAEPPTNKSLSSLVVQLLQFQEEVFGKHVSNAPLTKLPIKCFLDF KAGGSLCHILAAAYKFKSDQGWRRYDFQNPSRMDRNVEMFMTIEKSLVQNNCLSRPNIFL CPDIEPKLLGKLKDIIKRHQGTITEDKNNASHVVYPVPGNLEEEEWVRPVMKRDKQVLLH WGYYPDSYDTWIPASEIEASVEDAPTPEKPRKVHAKWILDTDTFNEWMNEEDYEVNDDKN PVSRRKKISAKTLTDEVNSPDSDRRDKKGGNYKKRKCSPSPSPTPEAKKKNAKKGPSTPY TKSKRGHREEEQEDLTKDMDEPSPVPNVEEVTLPKTVNTKKDSESAPVKGGTMTDLDEQE DESMETTGKDEDESSTGNKGEQTKNPDLHEDNVTEQTHHIIIPSYAAWFDYNSVHAIERR ALPEFFNGKNKSKTPEIYLAYRNFMIDTYRLNPQEYLTSTACRRNLAGDVCAIMRVHAFL EQWGLINYQVDAESRPTPMGPPPTSHFHVLADTPSGLVPLQPKTPQGRQVDADTKAGRKG KELDDLVPETAKGKPELQTSASQQMLSFPDKSKEKPTDMQNFGLRTDMYTKKNVPSKSKA AASATREWTEQETLLLLEALEMYKDDWNKVSEHVGSRTQDECILHFLRLPIEDPYLEDSE ASLGPLAYQPIPFSQSGNPVMSTVAFLASVVDPRVASAAAKSALEEFSKMKEEVPTALVE AHVRKVEEAAKVTGKADPAFGLESSGIAGTTSDEPERIEESGTDEARAEGQAADEKKEPK EPREGGGVVEEEAKEKTSEAPKKDEEKGKEGDSEKESEKSDGDPVVDPEKEKEPKEGQEE MLKEVMESEGERKTKVERDIGEGNLSTAAAAALAAAAVKAKHLAAVEERKIKSLVALLVE TQMKKLEIKLRHFEELETIMDREREALEYQRQQLLADRQAFHMEQLKYAEMRARQQHFQQ MHQQQQQPPPTLPPGSQPIPPTGAAGPPTVHGLAVAPASVAPAPAGSGAPPGSLGPSEQI GQAGPTTGPQQPQPAGALQPGAVPPGIPAPGPHGPSPFPSQQTPPSMMPGAVPGSGHPGV AAQSPAIVAAVQGNLLPSASPLPDPGTPLPPDPTAPSPGTVTSVPPPQ NT seq 3747 nt NT seq  +upstreamnt  +downstreamnt atgcgggaacttattggaacaaggaccgcggccccaacgttgaagtcatacggaggcctg cggacacccgtgaccccagttacgactaacgtgcgcctctgcctcggcaaggacctacaa ggagggtacggcggcaagggccgctctgggcgcccgtgccgggacaaaagggaccgcggc ccgtggcgccgcccccaccccgccgcgccccgcgcccgccgtgctctctgccccggtttt gctccctgcctgccgccagcagccagcgctgccctaagcgtcgccctcccggctttgctg agggagacagccgcggggtggacaggatgcctggtgggcgtcctccgcccccgcagcgtg cgggccacagcgcccgcctgggcgcccccacggagccagtatatacaagctgaaccaccc accaacaagtccttgtctagcctggtggtacagttgctacagtttcaggaagaagttttt ggcaaacatgtcagcaatgcaccactcaccaaactgccgattaaatgtttcctagatttc aaagcaggaggctccctgtgccacatacttgcagctgcttacaaattcaagagtgaccag ggctggcggcgttatgatttccagaacccatcacgcatggaccgaaatgtggaaatgttc atgaccattgagaagtccttggtacagaataattgcctgtctcggcctaacatttttctg tgcccagatattgagcccaaactactagggaaattaaaggatattatcaagagacaccag ggaacaattactgaagataagaacaatgcttcccatgttgtatatcctgtcccaggaaac ctagaagaagaggagtgggtacgaccagtcatgaagagagacaaacaggttcttctgcac tggggctactatcctgacagctacgacacgtggattccagccagtgaaattgaagcatct gtggaagatgctccaactccagagaaacctaggaaggttcatgcaaagtggatcctagat acagacacctttaatgaatggatgaatgaggaagactatgaagtaaatgatgacaaaaac cctgtctcacgacgaaagaagatttcagcaaagacactgacagatgaggtgaatagccca gattcagatcgacgtgacaagaaaggggggaactataaaaaaaggaagtgctccccctct ccttcaccaaccccagaagctaagaagaaaaatgctaagaaaggtccctcaacaccttac accaagtcaaagcgtggccacagagaagaggagcaagaagacttgacaaaggacatggat gagccctcaccggtccctaatgtagaagaagtgacgctacccaaaacagtcaacactaag aaggactctgagtcagccccagtcaaaggaggcaccatgactgacctggatgaacaggaa gatgaaagcatggagaccacgggcaaggatgaggacgagagcagtacggggaacaaggga gagcagaccaagaatccagacctacatgaggacaatgtaacagagcagacccaccacatc atcattcccagctatgctgcctggtttgactacaacagtgttcatgctattgagcggagg gctctacctgaattctttaatggcaagaacaagtccaagactccagaaatctatctggcc tatcgaaacttcatgattgacacataccggctgaatccccaggaatatctcacctccacc gcctgccgccgcaatctggcaggtgacgtctgtgccattatgagagtccatgccttccta gaacagtggggtcttattaactaccaagtggatgctgagagtcgaccaactccaatgggg cctccacccacctctcacttccatgtgttggctgacacaccatcagggctggtacccctg caacccaagaccccacagggccgccaggttgatgctgataccaaggctgggcggaagggc aaagagctggatgacctggtgccagagacggctaagggcaagccagagctgcagacctct gcttcccagcaaatgctcagctttcctgacaaaagcaaagagaaaccaacagatatgcag aacttcgggctacgcacagacatgtacaccaagaagaatgtcccttccaagagcaaagcc gcagccagtgccactcgagagtggactgaacaggagactctgctactcctggaggccctg gaaatgtacaaggatgattggaacaaagtgtctgagcatgtaggaagccgcacgcaggac gaatgcatcttgcattttcttcgccttcccattgaagacccgtatctggaggactcagag gcctctctgggccccctggcctaccagcccatccccttcagtcagtcgggcaaccctgtt atgagcactgttgccttcctggcttctgtcgtcgatccccgagtggcctctgctgctgca aagtcagccctagaggagttctccaaaatgaaggaagaggtacctacagccctggtggag gcccatgttcggaaagtggaagaagcagccaaagtgacaggcaaggcagacccagccttt ggtctggaaagcagtggtattgcaggaaccacctctgatgagcctgagcgtattgaggag agcgggactgatgaggcacgggcggagggccaggctgcagatgagaagaaggagcccaag gaaccccgagaaggaggaggggttgtagaggaggaagcaaaggagaaaactagtgaggct cccaagaaggatgaagagaaagggaaagaaggtgatagtgagaaggagtctgaaaagagt gatggagatcctgtcgttgatcctgagaaggagaaggagcccaaggaagggcaggaggaa atgttgaaggaagtaatggagtcggagggggaaaggaagacaaaggtggaacgggatatt ggtgagggcaacctctccaccgctgccgctgctgccctggcagctgctgcagtgaaagcc aagcacttggctgctgttgaagagagaaagattaaatcattggtggccctgctggtagag acccagatgaagaagttggagatcaaactccgtcactttgaggaactagagacgatcatg gaccgggagcgagaagcactggagtatcagaggcaacagctcctggctgaccggcaagcc ttccacatggagcagctgaagtacgcagagatgagggcccggcagcagcacttccagcag atgcaccaacagcagcagcagccaccaccaactctgcccccgggctcccagcctataccc cccacaggggctgctgggccacccacagtccatggcctggctgtggctccagcctctgtg gcccctgctcctgctggcagtggagcccctcctggaagcttgggcccttcagaacagatt gggcaggcagggccaacgactgggccacagcagccacaaccagctggcgcgctccagcct ggggcagtccctccagggatacccgcccctggaccccatggcccctcaccgttccccagc caacaaactcctccctcaatgatgccaggggcagtgccaggcagcgggcacccaggcgtg gcggcccagagccctgccattgtggcagctgttcagggcaacctcctgcccagtgccagc ccactgccagacccaggcacccccctacccccagaccccacagctccgagtccaggcaca gtcacctctgtgccacctccacagtga

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