Cavia porcellus (domestic guinea pig): 100720967
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Entry
100720967 CDS
T07777
Name
(RefSeq) uncharacterized protein LOC100720967 isoform X1
KO
K14416
elongation factor 1 alpha-like protein
Organism
cpoc
Cavia porcellus (domestic guinea pig)
Pathway
cpoc03015
mRNA surveillance pathway
cpoc05134
Legionellosis
Brite
KEGG Orthology (KO) [BR:
cpoc00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
100720967
09160 Human Diseases
09171 Infectious disease: bacterial
05134 Legionellosis
100720967
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cpoc03019
]
100720967
Messenger RNA biogenesis [BR:
cpoc03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
100720967
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HBS1_N
bCoV_S1_N
Motif
Other DBs
NCBI-GeneID:
100720967
NCBI-ProteinID:
XP_003468500
LinkDB
All DBs
Position
Unknown
AA seq
622 aa
AA seq
DB search
MARHRNVRGYNYDEDFEDDDFYGQSVEDDYCISPSTAAQFIYSQRDKPSVVEPVEECYDD
LKDSANSVSDQQLSGLDQARLYSCLDHMREVLGDAVPDEILIEAVMKNKFDVQKALSFVL
ERDNGQNLKDKSGRVMSTGKIPKGVLFSSSGVLADNTQCSYPQSENHLDCINKSFDFSSS
VAKDGSYTSSVTPSQYLLHRKKTLDRPKSEKELELCKLPKEFSLADLIHDIPRDSCESQP
SVRLSSTDNLESVLSKNVDAELLRPHASECVSKDNFVFKEISDLKSLAKGSVTDNSLSDF
QSIPAQNSLGKNPLHLPNSLENTTLDNLNLSKRTEVGNVSLVEQRAKNYVFKNDSLQFSH
CESPSLIELVQQHKENDPSQYFGLADLCNQSSASFTDLSLGIFPLSQLANHCQPSTGISE
LTGSLSSLAFHKASPTRDLENLSLSDLIAETIDIDSAQIKKDPFESSLSEMRSSGIDSNI
DLSVLIKTPDFVTKPRVNQLVAPTSGIKVPSSKLGKNFNSFKESKKSSKSSLTRTPPFSV
SWTKALAARPSAFASTLCLRYPLKSCKRRTLDLYKTFLYSRQVQDVKDKEMSPFVAITPF
DFKSASPDDIVKANQKKAFTRE
NT seq
1869 nt
NT seq
+upstream
nt +downstream
nt
atggcccggcatcggaatgtccgaggctataactacgatgaagattttgaagatgatgat
ttctatggccaatcagtagaggatgattattgtatttcaccatcaacagctgctcagttt
atttattcacagcgtgacaaaccttcagttgttgagcctgtagaagagtgttatgatgat
ttgaaagattctgctaattctgtttcagaccaacagctaagtggacttgatcaagctcgt
ctctattcctgtcttgatcacatgcgagaggtgctgggggatgccgtgccagatgaaata
ctgattgaagcagttatgaagaacaagtttgatgtgcagaaggccttgtcatttgttttg
gaacgagataatgggcagaatttgaaggacaagagtgggagagtcatgtctacaggaaag
ataccaaaaggagtcttattttcttcctctggagttttagctgataatactcagtgttct
tatcctcaatcagaaaatcatttggattgcattaacaaatcctttgacttttctagctca
gtagcaaaagatggatcttacacttcttcagttacaccaagtcaatacttacttcatagg
aaaaagacacttgacagacctaaaagtgaaaaggaactagaattatgtaagttaccaaaa
gagttttcattagctgacctaattcatgatataccaagagattcttgtgaaagtcagcca
tcagtgagactgtcatccacagataatttggaaagtgtgctttcaaagaatgtggatgct
gaattgttaagacctcatgcatctgaatgtgtttccaaagacaattttgttttcaaagaa
atatcagatttaaagtctttagcaaaagggagcgtaacagacaatagtttatctgatttc
cagagcattccagcacaaaacagcttgggaaaaaatcctttacacttacctaactcattg
gaaaatacaactcttgataatttaaaccttagtaaaaggactgaagttggaaatgtttct
ttagttgaacaaagagccaagaactacgtttttaaaaatgacagtttgcagttttcgcac
tgtgaaagtccatccctaattgaactggttcagcaacacaaagaaaacgatccaagccag
tactttggtttagctgatctttgtaatcaatcttctgccagttttacagatctaagtttg
ggaatttttcccctgtcacagttagcaaatcattgtcagccttctactggaatatcagaa
ttaacaggatccctgtcatctttggcatttcataaagcttctcccacaagagaccttgag
aatttgtccctttctgatttgattgcagaaaccatcgatatagacagtgctcagataaag
aaagatccctttgagtccagtttatctgaaatgagatcttctggaatagattcaaatatt
gatctcagtgtcctaataaaaactccagattttgttacaaagcctagagtcaaccaattg
gttgctccaacatcaggaattaaagttccaagttcaaagttagggaagaatttcaattct
tttaaagaaagcaaaaaaagcagtaaaagctccctgactaggacaccacctttttctgtc
tcttggaccaaggcccttgctgctagaccttcagcttttgcttcaacactgtgtcttcgt
tacccactgaaaagctgcaagcggcgcacccttgacctttataagacttttctgtatagt
agacaagttcaagatgtaaaggacaaagaaatgagcccttttgtagcaataacaccattt
gacttcaaatcagcctctcctgatgacattgtaaaagctaatcaaaagaaagcatttact
agagaatag
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