Cavia porcellus (domestic guinea pig): 100721004
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Entry
100721004 CDS
T07777
Symbol
Vps16
Name
(RefSeq) vacuolar protein sorting-associated protein 16 homolog isoform X1
KO
K20180
vacuolar protein sorting-associated protein 16
Organism
cpoc
Cavia porcellus (domestic guinea pig)
Pathway
cpoc04140
Autophagy - animal
cpoc04148
Efferocytosis
cpoc05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
cpoc00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
100721004 (Vps16)
04148 Efferocytosis
100721004 (Vps16)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
100721004 (Vps16)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cpoc04131
]
100721004 (Vps16)
Membrane trafficking [BR:
cpoc04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
100721004 (Vps16)
Hops complex
100721004 (Vps16)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Vps16_N
Vps16_C
Motif
Other DBs
NCBI-GeneID:
100721004
NCBI-ProteinID:
XP_003476673
Ensembl:
ENSCPOG00000003602
UniProt:
H0V193
LinkDB
All DBs
Position
Unknown
AA seq
839 aa
AA seq
DB search
MDCYTANWNPLGDSAFYRKYELYSMDWDLKEELRECLVAAAPYGGPIALLRNPWRKEKAA
SVRPVLEIYSASGVPLASLLWKSGPVMSMGWSAEEELLCVQEDGAVLVYGLHGDFRRHFS
MGNEVLQNRVLDARIFHTELGSGVAILTGAYRFTLSANVGDLKLRRMPEVPGLQSAPSCW
TTLFQERVAHILLAVGPDLYLLDHATCSAVTPPGLPSGVTSFLQMAVSFTYRHLALFTDT
GYIWMGTASLTEKLCEFNCNIRAPPKQMVWCSRPRSKERAVVVAWERRLMVVGNAPESIQ
FVLDEDSYLVPELDGVRIFSRSSHEFLHEVPVASEEIFKIASMAPGALLLEAQKEYEKES
QKADEYLREIQELGQLTQAVQQCIEAAGHEHGPDMQKSLLRAASFGKCFLDRFPPDSFVR
MCQDLRVLNAVRDYHIGIPLTYSQYKQLTIQVLLDRLVLRRLYPLAIQICEYLRLPEVQG
VSRILAHWACYKVQQKDVSDEDVARAINQKLGDTPGVSYSDIAARAYGCGRTELAIKLLE
YEPRSGEQVPLLLKMKRSKLALNKAIESGDTDLVFTVLLHLKNELNRGDFFMTLRNQPMA
LSLYRQFCKHQELETLKDLYNQDDNHQELGSFHLRASYAAEERIEGRVAALQTAADAFYK
AKNEFAAKATEDQMRLLRLQRRLEDELGGQFLDLSLHDTVTTLIVGGHNKRAEQLARDFR
IPDKRLWWLKLTALADLEDWEELEKFSKTKKSPIGYLPFVEICMKQHNKYEAKKYASRVG
PEQKVKALLLVGDVAQAADVAIEHRNEAELSLVLSHCTGASDGATADKIQRARAQAQKK
NT seq
2520 nt
NT seq
+upstream
nt +downstream
nt
atggattgctacacagcgaactggaacccgctcggagattctgccttttaccggaaatat
gaactgtacagcatggactgggacctgaaggaggaactcagagaatgcttggtggctgct
gcaccctacgggggccccattgcactgctaaggaacccctggcgaaaggagaaagctgcc
agcgtgcggccagtgcttgagatctattcagcttctggtgtgcccctggccagcctgctg
tggaagagtggtcctgtgatgtccatgggctggtctgctgaggaagaactgctctgtgtg
caggaagatggtgcagtactggtttatgggcttcatggtgacttccggaggcactttagc
atgggcaatgaagtgctgcagaaccgggttctagatgcccggatctttcacactgagctt
ggttctggagtggccatcctcacaggggcctatcgctttacccttagtgccaatgtgggc
gacctcaaactccgccggatgccagaggtgccaggcctgcaaagtgcaccctcatgttgg
accacattgttccaggaacgagtggcacacattcttctggctgtggggcccgatctctat
ctcctggatcacgcaacctgttctgcagtgacaccccctggcctaccctcaggagtgacc
agcttcctgcagatggctgtctcctttacctatcgacacctagcactcttcacagacaca
ggctacatctggatggggacagcatcacttacagagaagctgtgtgagttcaactgcaac
atccgggcacccccaaagcaaatggtctggtgcagtcgccctcgaagcaaggagagggct
gtcgtggtggcctgggagaggcggctaatggtggtgggcaatgcacctgagagcatccaa
tttgtgctagatgaggactcttacctggttcctgagctcgatggagtccgtatcttctcc
cgcagcagtcacgagtttctgcatgaggttccagtggccagtgaggagatcttcaaaatt
gcttcaatggcccctggagcactgctgttggaagcccagaaagaatatgagaaagagagc
cagaaggcagatgagtacctgcgagagattcaggagctgggccagctgacccaggctgtg
cagcagtgcattgaagccgcaggacatgagcatgggccagacatgcagaagagtctgctc
agggcggcctcctttggaaagtgtttcctcgacagatttccacctgacagctttgtacgc
atgtgtcaggacctgcgtgtgctcaatgctgttcgggactaccacattgggatccccctc
acctacagccaatataagcaacttaccatccaggtgttactagacaggctcgtgttacgg
agactttacccccttgccatccagatatgcgagtacttgcgccttccagaagtacagggt
gtcagcaggatcctggctcactgggcctgctataaggtacaacagaaggatgtgtcagat
gaggatgttgcacgagccattaatcagaaactgggagacactcctggtgtctcatattca
gacattgctgcacgggcctatggctgtggccgcacagagctggccatcaagctcctggag
tatgaaccacgttcaggggagcaagtacccctcctcctcaagatgaaaaggagcaaactg
gcactaaacaaggccattgagagtggggacacagacctggtgttcacggtgttgctgcac
ctgaagaatgagctgaaccgaggagactttttcatgaccctccggaaccagcccatggcc
ctgagtttgtaccgacagttttgtaagcatcaggagctagagacactgaaggacctctac
aatcaagatgacaatcaccaggaattgggcagcttccacctccgagccagctatgctgca
gaagagcgcattgaggggcgagttgcagctctgcagacagcagctgatgccttttacaag
gccaagaatgagtttgcagccaaggccacagaggatcaaatgcgcctccttcggctacaa
cggcgcctagaagatgagctgggaggccagttcctagacctgtctctacatgacacagtc
acgaccctcattgttggtggtcacaacaagcgtgcagagcagctggcacgtgacttccgc
atccctgacaagaggctctggtggctgaagctcactgccctggcagatttggaagactgg
gaggagctggagaagttttccaagaccaaaaaatcaccgattggttacctgcccttcgtg
gaaatctgcatgaagcagcacaacaaatatgaagccaagaaatatgcatcccgagtgggt
cctgagcagaaggtcaaggccttgcttcttgttggagacgtggcccaggctgcagatgtg
gccattgaacaccggaatgaggctgagttgagccttgtgttgtcccactgcactggagcc
tctgatggagccacagctgacaagattcaacgggccagagcacaagcccagaagaagtga
DBGET
integrated database retrieval system
