Cavia porcellus (domestic guinea pig): 100721234
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Entry
100721234 CDS
T07777
Symbol
Dhx15
Name
(RefSeq) pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15
KO
K12820
pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15/PRP43 [EC:
5.6.2.6
]
Organism
cpoc
Cavia porcellus (domestic guinea pig)
Pathway
cpoc03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cpoc00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
100721234 (Dhx15)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cpoc03041
]
100721234 (Dhx15)
03009 Ribosome biogenesis [BR:
cpoc03009
]
100721234 (Dhx15)
Enzymes [BR:
cpoc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
100721234 (Dhx15)
Spliceosome [BR:
cpoc03041
]
Complex A
U2 snRNP components
U2 related factors
100721234 (Dhx15)
Complex B
100721234 (Dhx15)
Complex C
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-SnRNP related factors
100721234 (Dhx15)
Ribosome biogenesis [BR:
cpoc03009
]
Eukaryotic type
90S particles
Helicases
100721234 (Dhx15)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
Helicase_C
HA2_N
DEAD
AAA_22
AAA_19
SRP54
nSTAND3
AAA_29
Flavi_DEAD
AAA_25
Motif
Other DBs
NCBI-GeneID:
100721234
NCBI-ProteinID:
XP_003467455
Ensembl:
ENSCPOG00000006467
UniProt:
H0V7U8
LinkDB
All DBs
Position
Unknown
AA seq
795 aa
AA seq
DB search
MSKRHRLDLGEDYPSGKKRAGTDGKDRDRDRDREDRSKDRDRERDRGDREREREKEKEKE
LRASTNAMLISAGLPPLKASHSAHSTHSAHSTHSTHSAHSTHAGHTAHTSLPQCINPFTN
LPHTPRYYDILKKRLQLPVWEYKDRFTDILVRHQSFVLVGETGSGKTTQIPQWCVEYMRS
LPGPKRGVACTQPRRVAAMSVAQRVADEMDVMLGQEVGYSIRFEDCSSAKTILKYMTDGM
LLREAMNDPLLERYGVIILDEAHERTLATDILMGVLKEVVRQRSDLKVIVMSATLDAGKF
QIYFDNCPLLTIPGRTHPVEIFYTPEPERDYLEAAIRTVIQIHMCEEEEGDLLLFLTGQE
EIDEACKRIKREVDDLGPEVGDIKIIPLYSTLPPQQQQRIFEPPPPKKQNGAIGRKVVVS
TNIAETSLTIDGVVFVIDPGFAKQKVYNPRIRVESLLVTAISKASAQQRAGRAGRTRPGK
CFRLYTEKAYKTEMQDNTYPEILRSNLGSVVLQLKKLGIDDLVHFDFMDPPAPETLMRAL
ELLNYLAALNDDGDLTELGSMMAEFPLDPQLAKMVIASCDYNCSNEVLSITAMLSVPQCF
VRPTEAKKAADEAKMRFAHIDGDHLTLLNVYHAFKQNHESVQWCYDNFINYRSLMSADNV
RQQLSRIMDRFNLPRRSTDFTSRDYYINIRKALVTGYFMQVAHLERTGHYLTVKDNQVVQ
LHPSTVLDHKPEWVLYNEFVLTTKNYIRTCTDIKPEWLVKIAPQYYDMSNFPQCEAKRQL
DRIIAKLQSKEYSQY
NT seq
2388 nt
NT seq
+upstream
nt +downstream
nt
atgtccaagcggcaccggttggatctgggggaggattacccctccggcaagaagcgtgcg
gggaccgatgggaaagatcgggatcgtgaccgggatcgtgaagatcggtctaaagatcga
gaccgagaacgtgatagaggagatagagagcgggagagggagaaagaaaaggagaaagaa
ttgcgagcttcgacaaatgctatgcttatcagtgctggattaccacctttaaaagcttcg
cattcagctcactcaacccactctgctcattcaacacattcgacacattctgctcattca
acacacgctggacatacagcacacacatcacttccacagtgcattaatccattcaccaat
ttaccccatacccctcgatattacgatattctaaagaaacggcttcagctccctgtttgg
gagtataaggataggtttacagatattctggttagacatcagtcatttgtactggttggc
gagactgggtctggtaaaacaacacagattccacagtggtgtgtggagtacatgcgatca
ttacctggacccaagcgaggagttgcctgtacccaacccaggagagtagctgcaatgagt
gtggctcagagagttgctgatgaaatggatgttatgttgggccaggaagttggttactcc
attcgatttgaagactgcagtagtgcaaaaaccattcttaagtatatgactgatgggatg
ttacttcgtgaagctatgaatgatcccctcctggagcgttatggtgtaataattcttgat
gaggctcatgaaagaacattggctacagatattctcatgggtgttctgaaggaagttgta
aggcaaagatcagatttaaaggttatagttatgagtgctactctagatgcaggaaagttc
cagatttattttgataactgtcccctcttaactattcctggacgtacacatcctgttgag
atcttttatactccagaaccagagagagattatcttgaagcagctattcgaacagtgatc
cagatacatatgtgtgaagaggaagaaggggatctcctacttttcctaactggtcaagag
gaaattgatgaagcctgtaagagaataaagcgtgaggttgatgatttgggtcctgaagtt
ggtgacattaaaatcattccattgtactctacgcttccacctcagcagcagcaacgtatt
tttgagcctccacctcccaaaaagcagaatggagcaattggaagaaaggtggttgtgtca
actaacattgcagagacatctttgacaatagatggtgtagtgtttgtgattgatccagga
tttgcaaaacaaaaggtatacaatcctcgaatcagagttgaatctcttttggtgacagcc
attagtaaagcctcagctcagcaaagggctggtcgagctggacgtaccagacctggaaaa
tgcttcagactatacacagagaaagcttacaaaacagaaatgcaggataacacctatcct
gaaattctgcgttctaatttaggatcagtagtgttgcagttgaagaaacttggtattgat
gatttggtacattttgattttatggatccaccagctcctgaaactttgatgagagcctta
gaacttttgaattatctggctgctttaaatgatgatggagatctgactgaattggggtcc
atgatggcagagtttcctctagatccacagctggctaaaatggttattgcaagttgtgac
tacaactgttctaatgaggtcctatctattactgctatgttgtcagtcccacagtgtttt
gttcgccccacggaagccaagaaagctgcagatgaggccaagatgagatttgcccacata
gatggagatcatcttacactgctgaatgtctaccacgcttttaaacaaaatcatgaatcg
gttcagtggtgttatgacaacttcattaactacaggtccctgatgtctgcagacaatgta
cgccagcagctatctagaattatggacagatttaatttgcctcgtcgaagtactgacttc
acaagcagagactattacattaatataagaaaagctttggttactgggtatttcatgcag
gtggcacacttagaacgaacaggacattacttaactgtgaaagacaaccaggtggttcag
ttgcacccctcaactgttcttgaccacaagcctgaatgggtgctttataatgagtttgtt
ttaacaacaaagaattacatccggacatgtacagatatcaagccagaatggttggtgaaa
attgcccctcaatattatgacatgagcaatttcccacagtgtgaagcaaaaagacagttg
gaccgcattattgccaaacttcaatccaaggaatattcacagtactga
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