Cavia porcellus (domestic guinea pig): 100721277
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Entry
100721277 CDS
T07777
Name
(RefSeq) ATP-dependent RNA helicase DDX1-like
KO
K13177
ATP-dependent RNA helicase DDX1 [EC:
5.6.2.7
]
Organism
cpoc
Cavia porcellus (domestic guinea pig)
Brite
KEGG Orthology (KO) [BR:
cpoc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cpoc03041
]
100721277
03016 Transfer RNA biogenesis [BR:
cpoc03016
]
100721277
Enzymes [BR:
cpoc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
100721277
Spliceosome [BR:
cpoc03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
100721277
Transfer RNA biogenesis [BR:
cpoc03016
]
Eukaryotic type
tRNA spricing factors
tRNA splicing ligase complex
100721277
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SPRY
Helicase_C
DEAD
CMS1
DUF5766
ResIII
Paramyxo_PNT
Motif
Other DBs
NCBI-GeneID:
100721277
NCBI-ProteinID:
XP_003460792
Ensembl:
ENSCPOG00000009816
LinkDB
All DBs
Position
Unknown
AA seq
661 aa
AA seq
DB search
TLISDVVYVGPVLRSSVYSFSNPAIGPDGVCCQSREVKEWHGCRATKGLMKGKHYYEVSC
HDQGLCRVGWSTMQASLDLGTDKFGFGFGGTGKKSHNKQFDNYGEEFTMHDTIGCYLDIE
KGHVKFSKNGKDLGLAFEIPAHMKNQALFPACVLKNAELKFNFGEEDFKFPPKDGFVALC
KAPESYIVKSQHTGNAQVTQTKFLPNAPKALIVEPSRELAEQTLNNVKQFKKYVDNPKLR
ELLIIGGVAARDQLSVLENGVDIVVGTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQG
YSDFISRMHSQIPQITSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPD
TVHHVVVPVNPKTDRLWERLGKNHIRTDDVHAKDNTRPGANSAEMWSEAVKVLKGEYTVR
AIKEHKMDQAIIFCRTKIDCDNLEQYFMQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLE
RFKKGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLV
ATEKEKVWYHVCSSRGKGCYNTRLKEDGGCTIWYNEMQLLSEIEEHLNCTISQVEPDIKV
PVDEFDGKVTYGQKRALGGGSYKGHVDILAPTVQELAALEKEAQTSFLHLGYLPNQLFRT
F
NT seq
1986 nt
NT seq
+upstream
nt +downstream
nt
acgctgatttcagatgtggtgtatgtggggcctgtactgagaagttctgtgtattctttc
tcaaacccagcaattgggccggatggggtttgttgtcaaagcagagaagtaaaggagtgg
catggatgccgagctaccaaaggactgatgaaagggaaacactactatgaggtatcttgt
cacgaccaagggctctgcagagtcgggtggtctaccatgcaggcatccttagaccttggt
actgacaagtttggatttggctttggtggaacaggaaagaaatcccacaataaacagttt
gataattatggagaggaattcactatgcatgataccattggctgttacctagatattgag
aaaggacacgtaaagttctccaaaaacggaaaagacctggggctggcctttgaaatcccc
gcacacatgaaaaaccaggccctctttcctgcctgtgttctgaagaatgctgagctgaaa
tttaactttggtgaagaagacttcaagtttccacccaaagatggatttgttgctctttgc
aaggccccagagagttacatcgtcaagtcacagcacacaggtaatgcacaggtgacacag
acgaagtttctccccaatgctccaaaggcactcatcgttgaaccctcccgggagctcgct
gaacaaactttgaataatgtcaagcagtttaagaaatacgttgataaccctaaattaagg
gagcttctcataattggaggggttgccgcacgggaccagctctctgttttggaaaacggg
gtggatattgtcgtaggaactccgggaaggctggatgacttggtgtcaactggaaagctg
aacctgtctcaagtccggttcctggtcctggacgaagcagatggtcttctttctcaaggt
tattctgactttataagtcggatgcacagccagattcctcagattacttctgatggaaaa
agactccaggtgatcgtttgctctgctaccttgcattctttcgatgtgaagaagctgtct
gagaagataatgcattttcccacctgggtggatttaaaaggagaagattctgttccagac
accgtgcaccatgtggtggtccccgtgaaccccaagaccgacaggctctgggagcggctg
gggaagaaccacatccggactgatgatgtccatgcaaaagataacacgagacctggagcc
aacagtgcagagatgtggtctgaagctgtcaaagtcctgaagggggagtacactgtccgg
gccatcaaggagcacaagatggatcaagcaatcatcttctgcaggaccaagatcgactgt
gacaacttggagcagtacttcatgcagcagggaggaggccctgacaagaaaggacaccag
ttctcctgtgtttgtcttcatggtgacaggaaacctcacgagaggaagcagaacttggaa
agattcaagaaaggagatgtaagattcttgatctgcacagatgtagctgctagagggatt
gatattcatggtgttccttacgttataaatgtgaccctgcctgatgagaaacagaactac
gtgcaccgcatcggccgcgtgggaagagcagagaggatgggtctggccatttccctggtg
gcgacagaaaaagaaaaggtctggtaccacgtgtgcagcagtcgcggcaagggctgctac
aacaccaggcttaaggaggacggtggctgtaccatctggtacaacgagatgcagttgctc
tcagagatagaagagcacctgaactgcaccatttcccaggtggagcccgacatcaaggtc
ccagtggatgaatttgatgggaaggttacctacggccagaagagggctcttggcggtgga
agctacaaaggccatgtagacatcctggcccctactgtccaggagctggccgccctggag
aaggaggcccagacgtccttcctgcacctgggctacctccccaaccagctcttccggacc
ttctga
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