Cavia porcellus (domestic guinea pig): 100721308
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Entry
100721308 CDS
T07777
Symbol
Ercc2
Name
(RefSeq) TFIIH basal transcription factor complex helicase XPD subunit
KO
K10844
DNA excision repair protein ERCC-2 [EC:
5.6.2.3
]
Organism
cpoc
Cavia porcellus (domestic guinea pig)
Pathway
cpoc03022
Basal transcription factors
cpoc03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
cpoc00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
100721308 (Ercc2)
09124 Replication and repair
03420 Nucleotide excision repair
100721308 (Ercc2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cpoc03021
]
100721308 (Ercc2)
03036 Chromosome and associated proteins [BR:
cpoc03036
]
100721308 (Ercc2)
03400 DNA repair and recombination proteins [BR:
cpoc03400
]
100721308 (Ercc2)
Enzymes [BR:
cpoc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
100721308 (Ercc2)
Transcription machinery [BR:
cpoc03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
100721308 (Ercc2)
Chromosome and associated proteins [BR:
cpoc03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
100721308 (Ercc2)
DNA repair and recombination proteins [BR:
cpoc03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
100721308 (Ercc2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HBB
DEAD_2
Helicase_C_2
ResIII
DEAD
AAA_22
SesA
SNF2-rel_dom
Motif
Other DBs
NCBI-GeneID:
100721308
NCBI-ProteinID:
XP_003464723
Ensembl:
ENSCPOG00000015600
UniProt:
A0A286XIK9
LinkDB
All DBs
Position
Unknown
AA seq
760 aa
AA seq
DB search
MKLNVDGLLVYFPYDYIYPEQFSYMLELKRTLDAKGHGVLEMPSGTGKTVSLLALIMAYQ
RAYPLEVTKLIYCSRTVPEIEKVIEELRKLLSFYEKQEGEKLSFLGLALSSRKNLCIHPE
VTPLRFGKDVDGKCHSLTASYVRAQYQQDTSMPHCRFYEEFDAHGRQVPLPAGIYNLDDL
KALGQRQGWCPYFLARYSILHANVVVYSYHYLLDPKIADLVSKELARKAVVVFDEAHNID
NVCIDSMSVNLTRRTLDRCQANLDTLQKTVLRIKETDEQRLRDEYRRLVEGLREASVARE
TDAHLANPVLPDEVLQEAVPGSIRTAEHFLGFLRRLLEFVKWRLRVQHVVQESPPAFLSS
LAQRVCIQRKPLRFCAERLRSLLHTLEIADLADFSPLTLLANFATLVSTYAKGFTIIIEP
FDDRTPTIANPVLHFSCMDASLAIKPVFERFQSVIITSGTLSPLDIYPKILDFHPVTMAT
FTMTLARVCLCPMIIGRGNDQVAISSKFETREDIAVIRNYGNLLLEMSAVVPDGIVAFFT
SYQYMESTVASWYEQGILENIQRNKLLFIETQDGAETSVALEKYQEACENGRGAILLSVA
RGKVSEGIDFVHHYGRAVIMFGVPYVYTQSRILKARLEYLRDQFQIRENDFLTFDAMRHA
AQCVGRAIRGKTDYGLMVFADKRFARADKRGKLPRWIQEHLTDANLNLTVDEGVQVAKYF
LRQMAQPFHQEDQLGLSLLSLEQLESEEMLRRIEQIAQQL
NT seq
2283 nt
NT seq
+upstream
nt +downstream
nt
atgaagctcaacgtggacgggctgctggtctacttcccgtacgactacatctacccggag
cagttctcctatatgcttgagctcaagcgcacgctggacgccaagggtcatggagtcctg
gagatgccctcaggtactgggaagacagtgtctctgctagccctgatcatggcctaccag
cgggcatatccactggaggtgaccaaactcatctactgctcgaggactgtgcctgagatt
gagaaggtgatcgaagagctgcgcaagttgctcagcttctacgagaagcaggagggggag
aagctgtcatttttggggctggctttgagttcccgcaagaacctgtgtattcatcccgag
gtgacacctctgcgctttgggaaggatgtggacgggaaatgccacagcctcacagcctcc
tacgtgcgcgcgcagtatcagcaggataccagcatgccccactgccgcttctatgaggag
tttgatgcccatgggcgccaggttcccctccctgctggcatctataaccttgatgacctg
aaggctctggggcagcgtcagggttggtgcccatacttcctggcccgctactcgatcctg
cacgccaatgtggtggtatacagctaccactacctcctggaccccaagattgctgaccta
gtgtccaaggagctggcccgcaaggccgtcgtggtctttgatgaggcccacaacatcgac
aatgtctgcatcgactccatgagcgtcaacctcactcgccgcaccctcgaccgatgccag
gccaacctggacaccctgcagaagacggtgctcaggatcaaggagacagatgagcagcgg
ctgcgggatgagtaccggcggctggtagaagggctgcgggaggccagcgtagcccgggag
acagatgcccacctggccaaccccgtgctgcccgatgaggtgctgcaggaggcggtccct
ggctccatccgcacggccgagcacttcctgggcttcctgcggcggctgctggagtttgtc
aagtggcggctgcgcgtgcagcacgtggtgcaggagagtccccccgccttcctcagcagc
ctggcccagcgcgtgtgcatccagcgtaagcccctcagattctgtgctgagcgcctccgc
tccctcctgcataccttggagatcgcagaccttgccgacttctcgccactcaccctcctc
gctaacttcgccaccctcgtcagcacctatgccaaggggttcaccatcatcattgagccc
ttcgacgacaggaccccgactattgccaaccctgtcctgcacttcagctgcatggatgcc
tcgctggccattaaacctgtgttcgagcgcttccagtctgtcatcatcacctctgggaca
ctatccccgctggacatctaccccaagatcttggacttccaccccgtcaccatggcaacc
ttcaccatgacgttggcccgggtctgcctctgccccatgatcatcggccgcgggaatgac
caggtggccatcagctccaaattcgagacccgggaagatattgcggtgatccgaaactac
gggaacctcctgctggagatgtcggccgtggtccccgacggcattgtggccttcttcacc
agctaccagtacatggagagcaccgtggcctcctggtacgagcagggtatcctggaaaac
atccagaggaacaagctgctgttcattgagacccaggatggggctgagaccagcgtcgcc
ctggagaagtaccaggaggcctgcgagaatggccgtggggccatcctgctgtctgtggcc
cgtggcaaggtgtccgagggcatcgactttgtgcaccactacgggcgggctgtcatcatg
tttggcgtcccctacgtctacacccagagccgcatcctcaaggcgcgactggagtacctg
cgggaccagttccagatccgagagaacgacttcctcaccttcgacgccatgcgccatgcg
gcccagtgtgtgggccgagccatccggggcaagacagactacggcctcatggtctttgcc
gacaagcgctttgcccgggcagacaaacgggggaagctgccgcgctggatccaggagcac
ctcaccgacgccaacctcaacctcacggttgatgagggagtccaggtggccaagtacttc
ctgaggcagatggcacagcccttccaccaggaggaccagctgggcctgtccctgcttagc
ctggagcagctggagtcagaggagatgctgcggaggatagagcagatcgctcagcagctg
tga
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integrated database retrieval system
