Cavia porcellus (domestic guinea pig): 100721627
Help
Entry
100721627 CDS
T07777
Symbol
Cnot10
Name
(RefSeq) CCR4-NOT transcription complex subunit 10 isoform X1
KO
K12607
CCR4-NOT transcription complex subunit 10
Organism
cpoc
Cavia porcellus (domestic guinea pig)
Pathway
cpoc03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cpoc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
100721627 (Cnot10)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cpoc03019
]
100721627 (Cnot10)
Messenger RNA biogenesis [BR:
cpoc03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
100721627 (Cnot10)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_1
TPR_2
ARM_TT21_N
ARM_TT21
TPR_12
TPR_19
TPR_8
TPR_16
TPR_7
TPR_17
TPR_MalT
DUF948
Motif
Other DBs
NCBI-GeneID:
100721627
NCBI-ProteinID:
XP_003473448
Ensembl:
ENSCPOG00000005938
UniProt:
H0V6N4
LinkDB
All DBs
Position
Unknown
AA seq
754 aa
AA seq
DB search
MAADKPADQGAEKHEGTGQPSGITDQEKELSASAAQAFTSGNYDACLQHLACLQDINKDD
YKIILNTAVAEFFKSNQTTTDNLRQTLNQLKNQVHSAIEEMDGLDDVENSMLYYNQAVIL
YHLRQYTEAIAVGEKLYQFIEPFEEKFAQAVCFLLVDLYILTYQAEKALHLLAVLEKMIS
QGSNNKNGKNETGNNTNKDGSNHKAESGALIEAAKSKIHQYKVRAYIQMKSLKACKREIK
SVMNTAGNSAPSLFLKSNFEYLRGNYRKAVKLLNSSNIAEHPGFMKTGECLRCMFWNNLG
CIHFAMSKHNLGIFYFKKALQENDNVCAQLSAGSTDPGKKFSGRPMCTLLTNKRYELLYN
CGIQLLHIRRPLAAFECLIEAVQVYHANPRLWLRLAECCIAANKGTSEQETKGLPSKKGI
VQSIVGQGYHRKIVLASQSIQNTVYNDGQSSAIPVASMEFAAICLRNALLLLSEEQQDPK
QENGSKSNSQLGGNPENSESSETCSSKSHDGDKLIPAPPSSPLRKQELENLKCSILACSA
YVALALGDNLMALNHADKLLQQPKLSGSLKFLGYLYAAEALISLDRISDAITHLNPENVT
DVSLGISSNEQDQGSDKGENEAMESSGKRAPQCYPSSVTSARTVMLFNLASAYCLRSEYD
KARKCLHQAASMIHPKEVPPEAILLAVYLELQNGNTQLALQIIKRNQLLPTVKAHSEVRK
KPVFQPVHPVQPIQMPAFTHCAEKVMPYFWKTIA
NT seq
2265 nt
NT seq
+upstream
nt +downstream
nt
atggctgcagacaaacctgcagatcagggagcagaaaaacacgaagggacaggtcagccc
tctgggatcactgaccaggagaaggagctgtctgccagcgctgcccaagccttcacatct
ggaaattatgatgcctgtctacaacaccttgcctgtctacaagatataaacaaagatgat
tataaaataattttgaatacagcagtagctgagttttttaaaagtaaccaaacaacaaca
gataatttgagacaaacacttaaccagctgaagaatcaggtccactcagctattgaagaa
atggatggattagatgatgttgaaaacagcatgttgtattataatcaagcagtcattctt
tatcatctgcggcagtatacagaagcaatagcagttggtgaaaaactttatcagttcata
gaaccttttgaagaaaaatttgcccaagcggtatgttttttgcttgtagacctgtacatc
ttaacctaccaagctgagaaagctttgcatcttcttgctgtcctagaaaaaatgatttct
cagggtagcaataacaaaaatggaaagaacgagactggtaataataccaacaaagatgga
tctaatcataaagctgaaagtggagctctgatagaagctgcaaaatcaaagatacatcag
tacaaagtaagagcttatatccaaatgaagtccctgaaagcatgcaaaagggaaatcaaa
tcagtcatgaacacagctggaaattctgcaccttctctgtttcttaaaagcaattttgag
tacttaaggggcaattatcgaaaagctgtgaagctattaaatagttcgaacattgctgag
catccaggattcatgaaaacaggtgaatgtttgcgatgcatgttctggaataaccttggt
tgcatccattttgccatgagcaagcacaatttgggaattttttactttaagaaggcactg
caagagaatgacaacgtctgtgcacagctcagcgccgggagcactgacccaggcaaaaaa
ttttcaggaagacccatgtgtactttattaaccaacaagaggtatgagttgctgtataac
tgtgggattcagcttcttcacatcagaaggcctcttgctgccttcgagtgtctgattgaa
gctgttcaggtttatcatgcaaatcctcgcctatggttacggctggctgaatgctgcatt
gctgccaataaggggacttctgaacaagaaactaaaggtcttccaagtaaaaagggaatc
gtgcagtctatcgttggtcaaggctatcatcgtaaaatagttctggcatcacaatccata
cagaatacagtatataatgacgggcagtcttcagccattcctgtagccagtatggagttt
gcagccatttgtctcagaaatgccttgttgctgttatctgaagaacagcaagatccaaag
caggaaaatggctctaaaagcaacagtcagctcggagggaacccagagaacagcgagagc
agcgaaacttgcagcagtaaaagccatgatggagataaattgattccagctccaccctct
tctccattgagaaaacaggaactagaaaacttgaagtgctctatactggcttgcagcgca
tatgtggccctcgcactgggtgataacctgatggctttgaatcacgcagacaaacttctt
cagcagcccaaactgtcaggctctcttaagtttctgggctatttgtatgcagcagaagcc
cttatctccctggacagaatatcagatgccattactcacttgaatcccgagaatgtcacc
gatgtctccttagggatctcttccaacgaacaggaccaagggtcagacaagggtgaaaat
gaagcaatggaatcctctgggaaacgtgctccccagtgctaccctagctccgtcacctcg
gccaggaccgtgatgctgttcaacctcgccagtgcatactgcctgcggagcgagtatgac
aaagcccggaagtgtctgcaccaggcggcttccatgattcacccaaaggaggtgccccct
gaggccatcttgttggctgtctacctggaactgcagaatggtaacacccagttggccttg
cagatcatcaaaaggaatcaactgctcccaacagtgaaagcacactcagaagtgaggaag
aagccagtgttccagcctgtccacccagtccagcccatccagatgccagcattcacccac
tgtgcagagaaagtgatgccctacttttggaaaaccattgcctaa
DBGET
integrated database retrieval system
