Cavia porcellus (domestic guinea pig): 100721907
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Entry
100721907 CDS
T07777
Symbol
Trim71
Name
(RefSeq) E3 ubiquitin-protein ligase TRIM71
KO
K12035
tripartite motif-containing protein 71 [EC:
2.3.2.27
]
Organism
cpoc
Cavia porcellus (domestic guinea pig)
Pathway
cpoc05206
MicroRNAs in cancer
Brite
KEGG Orthology (KO) [BR:
cpoc00001
]
09160 Human Diseases
09161 Cancer: overview
05206 MicroRNAs in cancer
100721907 (Trim71)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cpoc03019
]
100721907 (Trim71)
04121 Ubiquitin system [BR:
cpoc04121
]
100721907 (Trim71)
Enzymes [BR:
cpoc01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
100721907 (Trim71)
Messenger RNA biogenesis [BR:
cpoc03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
100721907 (Trim71)
Ubiquitin system [BR:
cpoc04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
100721907 (Trim71)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
NHL
Filamin
DUF5128
zf-B_box
SGL
ANCHR-like_BBOX
zf-C3HC4
zf-RING_5
Motif
Other DBs
NCBI-GeneID:
100721907
NCBI-ProteinID:
XP_003473531
Ensembl:
ENSCPOG00000004496
UniProt:
H0V3A1
LinkDB
All DBs
Position
Unknown
AA seq
866 aa
AA seq
DB search
MASFPETDFQICLLCKEMCGSPAPLTSNSSASSSSSQTSTSSGGGGGGPGAAARRLHVLP
CLHAFCRPCLEAHRLPAAGGSAPGEPFKLRCPVCDQKVVLAEAAGMDALPSSAFLLSNLL
DAVVATGDEPPPKNGRAGAPASTGGHSNHRHHAHPRASASAPPLTPAPQPPAPTRPSQGG
PATSPSALLLRRPHGCSSCDEGNAASSRCLDCQEHLCDNCVRAHQRVRLTKDHYIERGPP
GPAAAAAAAQQLGLGPPFPGAPFSILSVFPERLGFCQNHDDEVLHLYCDTCSVPICRECT
MGRHGGHSFIYLQEALQDSRALTIQLLADAQQGRQAIQLSIEQAQTVAEQVEMKAKVVQS
EVKAVTARHKKALEERECELLWKVEKIRQVKAKSLYLQVEKLRQNLNKLESTISAVQQVL
EEGRALDILLARDRMLAQVQELKTVRSLLQPQEDDRVMFTPPDQALYLAIKSFGFVSSGA
FAPLTKATGDGLKRALQGKVASFTVIGYDHDGEPRLSGGDLMSAVVLGPDGNLFGADVSD
QQNGTYVVSYRPQLEGEHLVSVTMCNQHIENSPFKVVVKSGRSYVGIGLPGLSFGSEGDS
DGKLCRPWGVSVDKEGYIIVADRSNNRIQVFKPCGSFHHKFGTLGSRPGQFDRPAGVACD
TSRRIVVADKDNHRIQIFTFEGQFLLKFGEKGTKNGQFNYPWDVAVNSEGKILVSDTRNH
RIQLFGPDGVFLNKYGFEGALWKHFDSPRGVAFNQEGHLVVTDFNNHRLLVIHPDCQSAR
FLGSEGTGNGQFLRPQGVAVDQEGRIIVADSRNHRVQMFEANGSFLCKFGTQGSGFGQMD
RPSGIAITPEGMIVVVDFGNNRILIF
NT seq
2601 nt
NT seq
+upstream
nt +downstream
nt
atggcttcttttcccgagactgacttccagatctgcctgctctgcaaggagatgtgcggc
tcgccggcgccgctcacctccaactcgtccgcgtcatcctcgtcctcgcagacgtccacg
tcttccgggggcggtggcgggggccccggggcggcggcgcgtcgtctgcacgtcctgccc
tgtttgcacgccttctgtcggccctgtctcgaggcgcaccggctgccggcggctggcggc
agcgctccgggagagccgttcaagctgcgctgcccggtgtgcgaccagaaagtggtgctg
gccgaggcggcgggcatggatgcgctgccttcgtctgccttcctactcagcaacctgctt
gacgctgtggtggctacgggagacgagccgcctcccaagaacggacgcgccggcgcccca
gcgagcacaggcggccacagcaaccaccggcaccacgcgcacccgcgtgcgtccgcttcc
gcgccgccactgacgcccgcgccccagccacccgcgcccacgcgaccctcgcagggaggc
ccggccacctcgccgtcggcgctgctgttgcgcagaccccacggctgcagctcgtgcgat
gagggtaacgcggcttcgtcacgctgcctcgactgccaggagcacctgtgcgacaattgc
gttcgggcgcaccagcgtgtgcgccttaccaaagaccactacatcgagcgtggccctccg
gggcccgcggccgcggctgcggcggcgcagcagctcggactcgggccgcccttccctggc
gcgcccttttccatactctcggtgtttcccgagcgccttggcttctgccagaaccacgac
gacgaggtattgcatctatactgtgacacatgctcagtgcccatctgtcgtgagtgtacg
atgggccggcatggtggtcacagcttcatctacctccaagaggcgctacaggactccagg
gcactcaccatccagctgctggcagatgcacagcagggtcgccaggcaatccagctgagc
atcgagcaggcccagacagtggcagagcaggtggagatgaaggccaaggtggtgcagtcg
gaggtgaaagctgttactgcaaggcataagaaggccctggaggagcgtgagtgcgagctg
ctgtggaaggtagagaagatccgccaagtgaaagccaagtctctatatctgcaggtagaa
aagctacggcaaaacctcaacaagctggagagcaccatcagtgctgtccagcaggtccta
gaggagggtagggcactagacatactgcttgcccgagaccggatgctggcccaggttcag
gagttaaagactgtgaggagcctcctgcagccccaggaagatgatcgggttatgttcaca
cctcctgaccaggcactgtaccttgccatcaagtcctttggctttgttagcagtggggct
tttgcacctctcactaaggccacaggtgatggcctcaagcgggccctccagggtaaggtg
gcctcattcactgtcattggctatgaccatgatggtgagccccgcctctcaggaggtgac
ctaatgtcagctgtggtgctaggccctgatggcaacctgtttggggcagacgtgagtgat
cagcagaatggaacttacgtggtgagctaccggccccagcttgagggtgagcatctggta
tcagtgaccatgtgcaaccagcatattgagaacagccccttcaaggtggtggtcaagtca
ggccgcagttatgtgggcattgggctcccgggactgagctttggcagtgagggtgacagt
gatggcaagctctgtcgcccttggggtgtgagtgtagacaaagagggctacatcattgtc
gctgaccgtagcaataaccgcatccaggtgtttaagccctgtggctcctttcaccacaaa
tttggcaccctgggatcccggcctgggcagtttgaccgacctgctggagtggcctgtgac
acctcccggaggattgtagtggctgacaaggacaatcatcgtatccagatcttcaccttt
gagggccagttcctcctcaagtttggtgagaaaggaaccaaaaatgggcagttcaactat
ccttgggacgtagcagtgaattctgagggcaagatcctggtctctgacacccgtaaccat
cggattcagctgtttgggcctgatggggtcttcttaaataagtacggcttcgagggggcc
ctctggaagcactttgactccccaaggggtgtggccttcaaccaggagggtcacttggtg
gtcactgacttcaacaaccaccggctgctggttattcaccctgactgtcaatcagctcgc
ttcctgggctctgagggcactggcaatgggcagttcttgcgtccacaaggcgtggcggtg
gatcaggaaggacgcatcatcgtggctgattccaggaaccaccgggtacagatgttcgag
gccaatggcagcttcctgtgcaagtttggtactcagggcagcggctttgggcaaatggac
cgtccttctggcattgctattacccctgaaggaatgatcgttgtggtggactttggcaac
aatcgaatcctcatcttctaa
DBGET
integrated database retrieval system
