Cavia porcellus (domestic guinea pig): 100722180
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Entry
100722180 CDS
T07777
Symbol
Thoc3
Name
(RefSeq) THO complex subunit 3
KO
K12880
THO complex subunit 3
Organism
cpoc
Cavia porcellus (domestic guinea pig)
Pathway
cpoc03013
Nucleocytoplasmic transport
cpoc03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cpoc00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
100722180 (Thoc3)
09122 Translation
03013 Nucleocytoplasmic transport
100722180 (Thoc3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cpoc03019
]
100722180 (Thoc3)
03041 Spliceosome [BR:
cpoc03041
]
100722180 (Thoc3)
Messenger RNA biogenesis [BR:
cpoc03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
100722180 (Thoc3)
Spliceosome [BR:
cpoc03041
]
Complex C
Other components
EJC/TREX
100722180 (Thoc3)
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
100722180 (Thoc3)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_THOC3
Beta-prop_IFT122_1st
Beta-prop_WDR5
WD40
Beta-prop_EML_2
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_WDR3_1st
WD40_Prp19
ANAPC4_WD40
WDR55
Beta-prop_WDR36-Utp21_2nd
Beta-prop_WDR3_2nd
EIF3I
Beta-prop_WDR19_1st
Beta-prop_Aladin
Beta-prop_RIG_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_Vps41
Beta-prop_TEP1_2nd
WD40_Gbeta
Beta-prop_IFT140_1st
Beta-prop_EML
Beta-prop_WDR90_POC16_2nd
eIF2A
Beta-prop_WDR35_TULP_N
WD40_MABP1-WDR62_2nd
Tricorn_2nd
RMC1_N
NBCH_WD40
Beta-prop_HPS5
WD40_MABP1-WDR62_1st
Beta-prop_NOL10_N
B-prop_COPA_B_2nd
Beta-prop_ACSF4
Beta-prop_TEP1_C
PD40
WD40_RFWD3
Peptidase_S9_N
CFAP251_N
PROPPIN
TP_0598_N
Motif
Other DBs
NCBI-GeneID:
100722180
NCBI-ProteinID:
XP_003473400
Ensembl:
ENSCPOG00000025805
LinkDB
All DBs
Position
Unknown
AA seq
318 aa
AA seq
DB search
MAVPATAMGPSALGQSGPGSLAPWCSVSSGPSRYVVGMQELFRGHSKTREFPAHSAKVHS
VAWSCDGRRLASGSFDKTASVFLLEKDRLVSCWGLALAREKAVTALKLGENINICWSPDG
QTIAVGNKDDVVTFIDAKTHRSKAEEQFKFEVNEISWNNDNNMFFLTNGNGCINILSYPE
LKPVQSINAHPSNCICIKFDPMGKYFATGSADALVSLWDVDELVCVRCFSRLDWPVRTLS
FSHDGKMLASASEDHFIDIAEVETGDKLWEVQCESPTFTVAWHPKRPLLAFACDDKDGKY
DSSREAGTVKLFGLPNDP
NT seq
957 nt
NT seq
+upstream
nt +downstream
nt
atggcggtgcctgcgacagctatgggcccctcggcgctaggccagagcggtccgggctcc
ttggccccctggtgctcagtgagcagcggcccgtcgcgctacgtggttggaatgcaggag
ttgttccgaggccacagtaagacgcgcgagtttccggcacacagtgccaaagtgcactcg
gtggcctggagctgcgacggccgtcgcttagcttcgggatcttttgacaagacagccagt
gtcttcttgctggagaaagaccggttggtgagctgctggggcctggccctggccagagag
aaggctgtgacagctttgaagttaggggagaacattaatatctgctggagtcctgatggg
cagaccattgctgtaggcaacaaggatgatgtggtgacctttattgatgccaagacacat
cgttccaaagcagaagagcaattcaagtttgaggtcaatgaaatttcctggaacaatgac
aacaatatgttcttcctgaccaatggcaatggttgtatcaatattctcagctacccggaa
ctgaagccagtacagtccatcaatgctcatccttctaactgcatctgtatcaagtttgac
cccatggggaaatactttgctacaggaagtgctgatgctttggtcagtctctgggatgtg
gatgagctagtgtgtgtgcggtgcttctccaggctggattggcctgtgaggaccctcagt
tttagccatgacggaaaaatgctggcgtcagcttcggaggatcattttattgatatagct
gaagtagagacaggagacaagctatgggaggtgcagtgtgaatccccaaccttcaccgtg
gcctggcaccccaaaaggcctctgctagcgtttgcctgtgatgacaaagatggcaaatac
gacagcagccgggaagctgggactgtgaagttattcgggctccctaatgatccctga
DBGET
integrated database retrieval system