KEGG   Cavia porcellus (domestic guinea pig): 100722180
Entry
100722180         CDS       T07777                                 
Symbol
Thoc3
Name
(RefSeq) THO complex subunit 3
  KO
K12880  THO complex subunit 3
Organism
cpoc  Cavia porcellus (domestic guinea pig)
Pathway
cpoc03013  Nucleocytoplasmic transport
cpoc03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:cpoc00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    100722180 (Thoc3)
  09122 Translation
   03013 Nucleocytoplasmic transport
    100722180 (Thoc3)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:cpoc03019]
    100722180 (Thoc3)
   03041 Spliceosome [BR:cpoc03041]
    100722180 (Thoc3)
Messenger RNA biogenesis [BR:cpoc03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    TREX complex
     100722180 (Thoc3)
Spliceosome [BR:cpoc03041]
 Complex C
  Other components
   EJC/TREX
    100722180 (Thoc3)
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   TREX complex
    100722180 (Thoc3)
SSDB
Motif
Pfam: Beta-prop_THOC3 Beta-prop_IFT122_1st Beta-prop_WDR5 WD40 Beta-prop_EML_2 WD40_CDC20-Fz WD40_WDHD1_1st Beta-prop_WDR3_1st WD40_Prp19 ANAPC4_WD40 WDR55 Beta-prop_WDR36-Utp21_2nd Beta-prop_WDR3_2nd EIF3I Beta-prop_WDR19_1st Beta-prop_Aladin Beta-prop_RIG_2nd Beta-prop_CAF1B_HIR1 Beta-prop_Vps41 Beta-prop_TEP1_2nd WD40_Gbeta Beta-prop_IFT140_1st Beta-prop_EML Beta-prop_WDR90_POC16_2nd eIF2A Beta-prop_WDR35_TULP_N WD40_MABP1-WDR62_2nd Tricorn_2nd RMC1_N NBCH_WD40 Beta-prop_HPS5 WD40_MABP1-WDR62_1st Beta-prop_NOL10_N B-prop_COPA_B_2nd Beta-prop_ACSF4 Beta-prop_TEP1_C PD40 WD40_RFWD3 Peptidase_S9_N CFAP251_N PROPPIN TP_0598_N
Other DBs
NCBI-GeneID: 100722180
NCBI-ProteinID: XP_003473400
Ensembl: ENSCPOG00000025805
LinkDB
Position
Unknown
AA seq 318 aa
MAVPATAMGPSALGQSGPGSLAPWCSVSSGPSRYVVGMQELFRGHSKTREFPAHSAKVHS
VAWSCDGRRLASGSFDKTASVFLLEKDRLVSCWGLALAREKAVTALKLGENINICWSPDG
QTIAVGNKDDVVTFIDAKTHRSKAEEQFKFEVNEISWNNDNNMFFLTNGNGCINILSYPE
LKPVQSINAHPSNCICIKFDPMGKYFATGSADALVSLWDVDELVCVRCFSRLDWPVRTLS
FSHDGKMLASASEDHFIDIAEVETGDKLWEVQCESPTFTVAWHPKRPLLAFACDDKDGKY
DSSREAGTVKLFGLPNDP
NT seq 957 nt   +upstreamnt  +downstreamnt
atggcggtgcctgcgacagctatgggcccctcggcgctaggccagagcggtccgggctcc
ttggccccctggtgctcagtgagcagcggcccgtcgcgctacgtggttggaatgcaggag
ttgttccgaggccacagtaagacgcgcgagtttccggcacacagtgccaaagtgcactcg
gtggcctggagctgcgacggccgtcgcttagcttcgggatcttttgacaagacagccagt
gtcttcttgctggagaaagaccggttggtgagctgctggggcctggccctggccagagag
aaggctgtgacagctttgaagttaggggagaacattaatatctgctggagtcctgatggg
cagaccattgctgtaggcaacaaggatgatgtggtgacctttattgatgccaagacacat
cgttccaaagcagaagagcaattcaagtttgaggtcaatgaaatttcctggaacaatgac
aacaatatgttcttcctgaccaatggcaatggttgtatcaatattctcagctacccggaa
ctgaagccagtacagtccatcaatgctcatccttctaactgcatctgtatcaagtttgac
cccatggggaaatactttgctacaggaagtgctgatgctttggtcagtctctgggatgtg
gatgagctagtgtgtgtgcggtgcttctccaggctggattggcctgtgaggaccctcagt
tttagccatgacggaaaaatgctggcgtcagcttcggaggatcattttattgatatagct
gaagtagagacaggagacaagctatgggaggtgcagtgtgaatccccaaccttcaccgtg
gcctggcaccccaaaaggcctctgctagcgtttgcctgtgatgacaaagatggcaaatac
gacagcagccgggaagctgggactgtgaagttattcgggctccctaatgatccctga

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