Cavia porcellus (domestic guinea pig): 100722283
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Entry
100722283 CDS
T07777
Symbol
Taf5
Name
(RefSeq) LOW QUALITY PROTEIN: transcription initiation factor TFIID subunit 5
KO
K03130
transcription initiation factor TFIID subunit 5
Organism
cpoc
Cavia porcellus (domestic guinea pig)
Pathway
cpoc03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
cpoc00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
100722283 (Taf5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cpoc03021
]
100722283 (Taf5)
03036 Chromosome and associated proteins [BR:
cpoc03036
]
100722283 (Taf5)
Transcription machinery [BR:
cpoc03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
100722283 (Taf5)
Coactivators
SAGA/TFTC/STAGA complex
100722283 (Taf5)
Chromosome and associated proteins [BR:
cpoc03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
PCAF complex
100722283 (Taf5)
STAGA complex
100722283 (Taf5)
TFTC complex
100722283 (Taf5)
SAGA complex
100722283 (Taf5)
SLIK complex
100722283 (Taf5)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
WD40_Prp19
TFIID_NTD2
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_TEP1_2nd
Beta-prop_CAF1B_HIR1
EIF3I
Beta-prop_EML_2
WD40_MABP1-WDR62_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_EML
WDR55
NBCH_WD40
WD40_MABP1-WDR62_1st
ANAPC4_WD40
Beta-prop_WDR75_1st
Beta-prop_IFT122_1st
Beta-prop_TEP1_C
WDR90_beta-prop_4th
Beta-prop_SCAP
Beta-prop_RIG_2nd
Beta-prop_IFT140_1st
Beta-prop_Vps41
Beta-prop_EIPR1
Beta-prop_DCAF4
Beta-prop_HPS5
WD40_RFWD3
Beta-prop_WDR19_1st
Beta-prop_SPT8
WD_LRWD1
Beta-prop_DCAF12
PEP5_VPS11_N
RAB3GAP2_N
Beta-prop_RIG_1st
CDK5RAP3
eIF2A
Cytochrom_D1
ABM-like
PROPPIN
DUF6505
Motif
Other DBs
NCBI-GeneID:
100722283
NCBI-ProteinID:
XP_023423126
Ensembl:
ENSCPOG00000005294
LinkDB
All DBs
Position
Unknown
AA seq
787 aa
AA seq
DB search
MAALAEEQTEVAVKLEPEAPPTLLPPQAGDGAGEGGGGTPNNGPSGGSGGTAAAPSAGGD
GGNPKPAVAVPSAAPAPAAAAAAAAAAAAAASEAGALHDRQTLLAVLQFLRQSNLREAEE
ALRREARLLEESAAGSGASGEPDGAEQQRAAHERAAQSNPAWNCQFQRKAEQSFGSVAVE
DQPDVSAVLSAYNQQGDPTMYEEYYSGLKHFIECSLDCHRAELSQLFYPLFVHMYLELVY
NQHENEAKSFFEKFHGDQECYYQDDLRVLSSLTKKEHMKGNETMLDFRTSKFVLRISRDS
YQLLKRHLQEKQNNQIWNIVQEHLYIDIFDGMPRSKQQIDAMVGSLAGEAKREANKSKVF
FGLLKEPEIEVPLDDEDEEGENEEGKPKKKKPKKDSIGSKSKKQDPNAPPQNRIPLPELK
DSDKLDKIMNMKETTKRVRLGPDCLPSICFYTFLNAYQGLTAVDVTDDSSLIAGGFADST
VRVWSVTPKKLRSVKQAADLSLIDKESDDVLERIMDEKTASELKILYGHSGPVYGASFSP
DRNYLLSSSEDGSVRLWSLQTFTCLVGYKGHNYPVWDTQFSPYGYYFVSGGHDRVARLWA
TDHYQPLRIFAGHLADVNCTRFHPNSNYVATGSADRTVRLWDVLNGNCVRIFTGHKGPIH
SLTFSPNGRFLATGATDGRVLLWDIGHGLMVGELKGHTDTVCSLRFSRDGEILASGSMDN
TVRLWDAIKAFEDLETDDFTTATGHINLPENSQELLLGTYMTKSTPVVHLHFTRRNLVLA
AGAYSPQ
NT seq
2364 nt
NT seq
+upstream
nt +downstream
nt
atggcggcgctggcggaggagcagacggaggtggcggtcaagctggaacccgaggcaccg
ccaacgttgctacctccacaagcaggcgatggtgcgggcgagggaggcggcggcactccc
aacaacggccccagcggtggcagcgggggcactgcggcggcaccttcggccggcggggat
ggcgggaaccccaaacccgcagtggccgtgccctccgctgccccggcgcccgctgctgct
gccgccgccgccgccgccgccgccgccgccgcctcggaggccggcgctctccacgaccga
cagacccttttggcggtgctgcagttcctacggcagagcaatctccgcgaggccgaggag
gcgctgcgccgcgaggcccggctgctggaggagtcggcggcgggctccggagcctcggga
gagccggacggcgccgagcagcagcgcgctgctcatgagcgagctgctcagtcaaaccca
gcttggaactgtcagttccagcgcaaggctgagcagagctttggaagtgtagctgtggaa
gaccagccagatgtcagtgctgtattgtctgcctacaatcaacaaggagacccgacaatg
tatgaagaatactatagtggactgaaacacttcattgaatgttccttggactgccatcga
gcagaattatcccaactcttttatcctctgtttgtacacatgtacttggagctagtctat
aatcaacatgagaatgaagcaaaatcattctttgagaagttccatggagatcaggaatgt
tattaccaggatgacctacgagtgttatctagtcttaccaaaaaggaacacatgaaaggg
aatgaaaccatgttggattttcgaacaagtaaatttgttctgcgtatttcccgtgactcg
taccaactcttgaagaggcatcttcaggagaaacagaacaatcagatatggaacatagtt
caggagcacctctacattgacatctttgatgggatgccgcgtagtaagcaacagatagat
gcgatggtgggaagtttggcaggagaggctaaacgagaggcaaacaagtcaaaggtattt
tttggtttattgaaagaaccagaaattgaggtacctttggatgatgaggatgaagaagga
gaaaatgaagaaggaaaacctaaaaagaagaagcctaaaaaagatagtattggatccaaa
agcaaaaaacaagatcccaacgctccacctcaaaacagaatccctcttcctgagctaaaa
gattcagataagttggataagataatgaatatgaaagaaaccaccaaacgagtgcgcctg
gggccggactgcctgccctccatttgtttctacacatttctcaatgcttaccagggcctc
actgcagtggatgtcactgacgattcaagtctgattgctggagggttcgcagattcaact
gtcagagtgtggtctgtgacacccaaaaagcttcgtagcgtcaaacaagcagcagatctt
agtctcatagacaaagaatcagatgatgtcttagaaagaatcatggatgagaaaactgca
agtgagttgaagattttgtatggtcacagtgggcctgtctatggagccagcttcagtccg
gataggaactatctactttcctcctcagaggacggatccgttagactgtggagcctgcaa
acgtttacttgcttggttggatataaaggacacaactacccagtgtgggacacacaattt
tctccatatggatattattttgtgtccgggggccatgaccgagtagctcggctctgggct
acagatcattatcagcctttaaggatatttgctggccatcttgctgatgtgaattgtacc
agattccacccaaactccaattatgttgccacgggctctgcagacagaactgtgcggctc
tgggatgttctgaatggtaactgtgtaaggatcttcactggacacaagggacccattcat
tccttgacattttctcccaatgggagattcctggctacaggagcaacagatggtagagtc
ctcctttgggatattggacatggtttgatggttggagaattaaaaggccacactgatacc
gtctgttcacttaggtttagtagagatggtgaaattttggcatcagggtcaatggataac
acagtccggttgtgggatgccatcaaagcatttgaagatttagagactgatgactttacc
acagccactgggcatataaatttacctgagaattcacaggagttattgttgggtacatac
atgaccaaatcaacgccagtggtacaccttcactttactcgaagaaacctggttctagct
gcaggagcttacagtccacaatga
DBGET
integrated database retrieval system
