Cavia porcellus (domestic guinea pig): 100722464
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Entry
100722464 CDS
T07777
Symbol
Atg16l1
Name
(RefSeq) autophagy-related protein 16-1 isoform X5
KO
K17890
autophagy-related protein 16-1
Organism
cpoc
Cavia porcellus (domestic guinea pig)
Pathway
cpoc04136
Autophagy - other
cpoc04140
Autophagy - animal
cpoc04621
NOD-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
cpoc00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
100722464 (Atg16l1)
04136 Autophagy - other
100722464 (Atg16l1)
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
100722464 (Atg16l1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cpoc04131
]
100722464 (Atg16l1)
03029 Mitochondrial biogenesis [BR:
cpoc03029
]
100722464 (Atg16l1)
Membrane trafficking [BR:
cpoc04131
]
Autophagy
Autophagosome formation proteins
Atg12 conjugation proteins
100722464 (Atg16l1)
Others
Specific organelles associated proteins
Auto phagosome
100722464 (Atg16l1)
Mitochondrial biogenesis [BR:
cpoc03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
100722464 (Atg16l1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ATG16
WD40
WD40_Prp19
WD40_WDHD1_1st
WD40_CDC20-Fz
Beta-prop_EML_2
WDR55
EIF3I
Beta-prop_TEP1_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_EML
Beta-prop_WDR75_1st
Beta-prop_TEP1_C
Beta-prop_DCAF4
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_1st
Beta-prop_RIG_2nd
Beta-prop_SCAP
Beta-prop_EIPR1
WDR90_beta-prop_4th
ANAPC4_WD40
WD40_RFWD3
NBCH_WD40
Beta-prop_IFT122_1st
Beta-prop_IFT140_1st
eIF2A
Beta-prop_DCAF12
Beta-prop_HPS5
Beta-prop_WDR19_1st
Beta-prop_NWD2_C
KASH_CCD
Motif
Other DBs
NCBI-GeneID:
100722464
NCBI-ProteinID:
XP_003474455
Ensembl:
ENSCPOG00000011372
UniProt:
A0A286XQS0
LinkDB
All DBs
Position
Unknown
AA seq
623 aa
AA seq
DB search
MSGLRTADFPRWKRHIAEELRRRDRLQRQAFEEIILQYNKLLEKSDLHSVLAQKLQAEKH
DTPNRHEISPGHDGTWNDSQLQEMAQLRIKHQEELTELHKKRGELAQLVIDLNNQMQQKD
REMQMNEAKITECLQTISDLETECLDLRSKLQDLEIANQTLKDEYDALQITFTALEEKLR
KTTEENQELVTRWMAEKAQEANRLNAENEKDSRRRQARLQKELAEAAKEPLPVEQDDDIE
VIVDETSDHTEETSPVRAISRVATKRLSQPAGGLLDSITNIFGLSDSPLLGHHSSDAARR
RSVSSFPVSQDVNVDAHPGPGKDVRVPTTALCVFDAHDGEVNAVQFSPGSRLLATGGMDR
RVKLWEVLGDKCEFKGALSGSNAGITSIEFDSAGAYLLAASNDFASRIWTVDDYRLRHTL
TGHSGKVLSAKFLLDNARIVSGSHDRTLKLWDLRSKVCIKTVFAGSSCNDIVCTEQCVMS
GHFDKKIRFWDIRSESVVREMELLGKVTALDLNPERTELLSCSRDDLLKIIDLRTNAVKQ
TFSAPGFKCGSDWTRVVFSPDGSYVAAGSAEGTLFVWSTLTGKVEKTLSKHHSSSINAVA
WAPSGLHVVSVDKGSKAVLWAQP
NT seq
1872 nt
NT seq
+upstream
nt +downstream
nt
atgtcggggctccgtacggccgacttccctcgctggaaacgccacatcgcggaggagctg
cggcgccgcgaccggctgcagaggcaggcgttcgaggagatcatcctgcagtataacaag
ttgctggaaaagtccgatcttcattcagtgttggcccagaaactacaagctgaaaagcat
gataccccaaaccggcatgagataagtcctggacacgatggcacatggaatgacagtcag
ctacaagaaatggcccagctgaggattaaacaccaggaagaactgactgagttacacaag
aaacgaggggagttagctcagttggtgatcgacctgaataaccagatgcagcagaaggac
agggagatgcagatgaacgaagcaaaaatcacagaatgtttgcagactatctctgacctg
gagacagagtgcctggacctgcgcagcaagctccaggaccttgagatagccaaccagacc
ttaaaagacgaatatgacgccctgcaaatcaccttcactgccttggaggagaaactgagg
aaaactaccgaggagaaccaggagctggtcaccaggtggatggccgagaaggcccaggag
gccaatcgccttaatgcagagaacgaaaaggactccagacgacggcaagcgcgacttcag
aaggagctcgcggaagcagcgaaggagcctctgccagtggagcaggacgatgacattgaa
gtcattgtggacgagacctcggatcacacagaagagacctctcctgtgcgggccatcagt
agagtagccactaagcgactctcgcagcctgctggaggtcttctggactctatcactaat
atctttggtctgtccgactctccccttttgggacatcattcttctgatgctgccaggaga
cgctctgtctcttccttcccagtctcccaggacgtaaatgtggatgctcatcctggtccc
ggtaaagacgtgagggtcccgaccactgccttgtgtgtctttgatgcacatgatggggaa
gtgaatgccgtgcagttcagcccaggctcccgcctgctggccacaggaggcatggaccgg
agggtgaagctgtgggaggtactcggagacaaatgtgagttcaagggggcgctgtctggc
agtaacgctggaattacaagcattgaatttgatagtgctggagcttacctcttagcagct
tcaaacgactttgcaagccgaatctggacagtggatgattatcggttacggcacacactc
acaggccacagtggaaaagtgttgtctgccaagttcttgttggacaacgcacggatcgtc
tcggggagccacgaccggaccctcaaactctgggacctgcgcagcaaagtctgcataaag
accgtgtttgctggatccagttgcaacgacattgtctgcacggagcagtgtgtaatgagt
ggacattttgacaagaaaatccgtttctgggacatccggtcagagagtgtggtccgggag
atggagctgctgggcaaggtcactgccctggacttgaaccccgagaggactgagctgctg
agctgctcgcgggacgacctgctgaaaatcattgacctgcggaccaatgccgtgaagcag
accttcagtgctcccggcttcaagtgtggctcggactggaccagagtggttttcagcccc
gatggcagctacgtagcagcaggctcagccgaaggcacactcttcgtctggagcacgctc
acagggaaagtggagaagacactctccaagcaccacagctcatccatcaacgcagtggcc
tgggcgccctccggcctgcatgtcgtcagtgtggacaaaggcagcaaagccgtgctgtgg
gcacagccatga
DBGET
integrated database retrieval system
